iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ncr-068828

Ensembl Protein ID

EAA35002

UniProt Accession

Q7SDY3; CWC24_NEUCR

Genbank Protein ID

EAA35002.1

Protein Name

Pre-mRNA-splicing factor cwc-24

Genbank Nucleotide ID

CM002236

Gene Name

cwc-24; NCU01954

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
NCU01954	EAA35002	EAA35002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.70e-06	27.5	310	348

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlC 45
           C+iC+ ++++ p+v++CgH f++ C  +++       +k  +C  C
   Q: 310  CIICRGPYSNSPVVTRCGHYFCEACAlKRY-------RKDPSCAAC 348
           *************************65999.......555556555 PP

Organism

Neurospora crassa

Functional Description
(View)

Involved in pre-mRNA splicing.

Protein Sequence
(Fasta)

MADTEQPPTA PTAPEPTTAT PTAPIAPVAI FKKRGAKGKA NLRKRPASPP PAAKDSDDDS 60
SDFESSEDEA TGQRIKRRKK NHHSAAVMAS SRDHNASTNS GVTKEEQIRS NTIYEADRDA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGGATGAGGT CGTTCACCAC TTTACCCTTC CGTCGCGTCT CGCCTCGACT ACGATCCCGC 60
ACTCAAGTCA TACGAACCCT TCCGTCCGCC TCAAGCAACC AGCTTCACGA TTCCTGATCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0238--DNA-binding
KW-0479--Metal-binding
KW-0507--mRNA processing
KW-0508--mRNA splicing
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0747--Spliceosome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR000571--Znf_CCCH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50103--ZF_C3H1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00642--zf-CCCH
PF14634--zf-RING_5

SMART

SM00184--RING
SM00356--ZnF_C3H1

Gene Ontology

GO:0005684--C:U2-type spliceosomal complex
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0045292--P:mRNA cis splicing, via spliceosome
GO:0034247--P:snoRNA splicing

KEGG

ncr:NCU01954

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000118	Aegilops tauschii	43.64	3.00e-38	150.00
IUUC-Aml-002002	Ailuropoda melanoleuca	41.71	8.00e-43	165.00
IUUC-Atr-003145	Amborella trichopoda	38.79	1.00e-30	125.00
IUUC-Apl-003440	Anas platyrhynchos	41.49	2.00e-41	160.00
IUUC-Aca-004421	Anolis carolinensis	42.35	1.00e-42	164.00
IUUC-Aly-006121	Arabidopsis lyrata	45.96	2.00e-39	154.00
IUUC-Ath-007493	Arabidopsis thaliana	45.96	4.00e-39	153.00
IUUC-Ago-007731	Ashbya gossypii	42.36	5.00e-33	132.00
IUUC-Acl-008186	Aspergillus clavatus	57.38	2.00e-75	273.00
IUUC-Afl-008484	Aspergillus flavus	48.21	1.00e-71	261.00
IUUC-Afu-008971	Aspergillus fumigatus	52.34	2.00e-81	293.00
IUUC-Ani-009499	Aspergillus nidulans	55.56	2.00e-66	244.00
IUUC-Ang-009717	Aspergillus niger	54.68	9.00e-84	301.00
IUUC-Aor-009898	Aspergillus oryzae	47.92	1.00e-70	258.00
IUUC-Ate-010508	Aspergillus terreus	56.12	9.00e-70	255.00
IUUC-Ame-011925	Astyanax mexicanus	41.84	3.00e-43	166.00
IUUC-Bgr-012259	Blumeria graminis	51.81	9.00e-75	271.00
IUUC-Bta-012490	Bos taurus	41.21	3.00e-42	164.00
IUUC-Bci-013882	Botrytis cinerea	54.12	5.00e-84	302.00
IUUC-Bdi-014084	Brachypodium distachyon	44.24	8.00e-39	152.00
IUUC-Bol-016607	Brassica oleracea	46.06	7.00e-37	146.00
IUUC-Bra-017747	Brassica rapa	45.45	3.00e-37	146.00
IUUC-Cel-018698	Caenorhabditis elegans	38.18	9.00e-35	139.00
IUUC-Cja-019764	Callithrix jacchus	37.97	3.00e-42	163.00
IUUC-Cfa-020902	Canis familiaris	42.21	3.00e-43	167.00
IUUC-Cpo-021715	Cavia porcellus	41.94	4.00e-06	44.30
IUUC-Cre-022885	Chlamydomonas reinhardtii	44.79	1.00e-34	137.00
IUUC-Csa-023933	Chlorocebus sabaeus	37.97	3.00e-40	157.00
IUUC-Cho-024587	Choloepus hoffmanni	37.76	8.00e-26	108.00
IUUC-Cin-025328	Ciona intestinalis	40.93	2.00e-41	161.00
IUUC-Csv-026148	Ciona savignyi	40.93	3.00e-42	163.00
IUUC-Cgl-026700	Colletotrichum gloeosporioides	54.71	7.00e-84	301.00
IUUC-Cne-026816	Cryptococcus neoformans	46.74	2.00e-41	160.00
IUUC-Dre-027744	Danio rerio	42.21	2.00e-44	170.00
IUUC-Dor-030305	Dipodomys ordii	40.32	3.00e-06	44.70
IUUC-Dse-031155	Dothistroma septosporum	43.98	2.00e-64	236.00
IUUC-Dme-031788	Drosophila melanogaster	42.19	2.00e-40	157.00
IUUC-Ete-033013	Echinops telfairi	42.13	1.00e-42	165.00
IUUC-Eca-033460	Equus caballus	42.21	2.00e-43	167.00
IUUC-Fca-035525	Felis catus	42.21	2.00e-43	167.00
IUUC-Fal-037206	Ficedula albicollis	43.59	5.00e-43	166.00
IUUC-Fox-037959	Fusarium oxysporum	56.36	2.00e-88	316.00
IUUC-Fso-038348	Fusarium solani	56.93	8.00e-94	334.00
IUUC-Gmo-038718	Gadus morhua	41.71	2.00e-45	174.00
IUUC-Ggr-040114	Gaeumannomyces graminis	59.60	2.00e-92	330.00
IUUC-Gga-041037	Gallus gallus	42.21	3.00e-44	170.00
IUUC-Gac-042103	Gasterosteus aculeatus	41.41	1.00e-42	165.00
IUUC-Gma-043581	Glycine max	45.22	9.00e-37	145.00
IUUC-Ggo-044906	Gorilla gorilla	42.21	3.00e-43	167.00
IUUC-Hsa-047000	Homo sapiens	42.21	3.00e-43	167.00
IUUC-Hvu-047578	Hordeum vulgare	38.89	7.00e-21	90.50
IUUC-Itr-048102	Ictidomys tridecemlineatus	37.82	7.00e-44	169.00
IUUC-Kpa-049320	Komagataella pastoris	45.30	6.00e-41	158.00
IUUC-Lch-050488	Latimeria chalumnae	39.81	4.00e-44	169.00
IUUC-Lpe-051156	Leersia perrieri	41.82	5.00e-31	126.00
IUUC-Loc-052670	Lepisosteus oculatus	41.21	6.00e-44	169.00
IUUC-Lma-053326	Leptosphaeria maculans	53.04	4.00e-75	273.00
IUUC-Laf-053570	Loxodonta africana	32.29	4.00e-42	163.00
IUUC-Mcc-055375	Macaca mulatta	42.21	2.00e-43	167.00
IUUC-Meu-056191	Macropus eugenii	41.12	1.00e-41	161.00
IUUC-Mor-057193	Magnaporthe oryzae	57.35	5.00e-88	315.00
IUUC-Mpo-057603	Magnaporthe poae	54.41	4.00e-88	315.00
IUUC-Mtr-058182	Medicago truncatula	42.42	2.00e-36	144.00
IUUC-Mla-058921	Melampsora laricipopulina	40.22	3.00e-32	129.00
IUUC-Mga-059281	Meleagris gallopavo	42.56	5.00e-43	166.00
IUUC-Mvi-060317	Microbotryum violaceum	43.56	2.00e-42	164.00
IUUC-Mmr-061744	Microcebus murinus	42.21	8.00e-43	165.00
IUUC-Mmu-063426	Mus musculus	31.71	6.00e-44	169.00
IUUC-Mac-065265	Musa acuminata	40.00	5.00e-31	126.00
IUUC-Mpu-066867	Mustela putorius furo	41.71	1.00e-42	165.00
IUUC-Mlu-067828	Myotis lucifugus	41.71	2.00e-42	164.00
IUUC-Nfi-068575	Neosartorya fischeri	54.55	4.00e-73	266.00
IUUC-Nle-069137	Nomascus leucogenys	42.21	2.00e-43	167.00
IUUC-Opr-071061	Ochotona princeps	40.32	7.00e-07	46.60
IUUC-Ont-071497	Oreochromis niloticus	39.72	7.00e-44	169.00
IUUC-Oan-073182	Ornithorhynchus anatinus	41.71	1.00e-42	165.00
IUUC-Ocu-073949	Oryctolagus cuniculus	42.64	1.00e-42	165.00
IUUC-Oba-075693	Oryza barthii	42.42	3.00e-31	127.00
IUUC-Obr-076128	Oryza brachyantha	43.03	4.00e-31	126.00
IUUC-Ogl-077323	Oryza glaberrima	42.42	3.00e-31	127.00
IUUC-Ogu-078766	Oryza glumaepatula	42.42	3.00e-31	127.00
IUUC-Oin-080054	Oryza indica	42.42	3.00e-31	127.00
IUUC-Olo-080325	Oryza longistaminata	44.70	5.00e-25	106.00
IUUC-Ome-081331	Oryza meridionalis	43.03	2.00e-31	127.00
IUUC-Oni-082786	Oryza nivara	42.42	2.00e-31	127.00
IUUC-Opu-083855	Oryza punctata	42.42	5.00e-31	126.00
IUUC-Oru-084304	Oryza rufipogon	42.42	3.00e-31	127.00
IUUC-Osa-086166	Oryza sativa	43.03	3.00e-31	127.00
IUUC-Ola-086368	Oryzias latipes	41.46	5.00e-41	159.00
IUUC-Olu-087624	Ostreococcus lucimarinus	41.82	3.00e-33	133.00
IUUC-Oga-088080	Otolemur garnettii	42.21	2.00e-43	167.00
IUUC-Oar-089934	Ovis aries	41.71	8.00e-43	165.00
IUUC-Ptr-090827	Pan troglodytes	42.21	3.00e-43	167.00
IUUC-Pan-092245	Papio anubis	42.21	2.00e-43	167.00
IUUC-Psi-093790	Pelodiscus sinensis	42.21	2.00e-44	171.00
IUUC-Pma-094326	Petromyzon marinus	41.21	1.00e-43	167.00
IUUC-Pno-095057	Phaeosphaeria nodorum	52.03	2.00e-72	264.00
IUUC-Ppa-095690	Physcomitrella patens	30.90	2.00e-37	147.00
IUUC-Pfo-097026	Poecilia formosa	40.91	2.00e-44	171.00
IUUC-Pab-098689	Pongo abelii	42.21	3.00e-43	167.00
IUUC-Pca-100687	Procavia capensis	42.71	7.00e-43	166.00
IUUC-Ppe-101155	Prunus persica	35.16	2.00e-38	150.00
IUUC-Pgr-103440	Puccinia graminis	47.59	3.00e-42	164.00
IUUC-Ptt-103893	Puccinia triticina	51.79	4.00e-16	76.60
IUUC-Pte-104377	Pyrenophora teres	49.55	2.00e-72	263.00
IUUC-Pyt-104731	Pyrenophora triticirepentis	53.12	1.00e-73	267.00
IUUC-Rno-105967	Rattus norvegicus	41.21	9.00e-42	162.00
IUUC-Sce-106215	Saccharomyces cerevisiae	41.07	2.00e-34	137.00
IUUC-Sha-107587	Sarcophilus harrisii	40.20	1.00e-39	155.00
IUUC-Sja-107955	Schizosaccharomyces japonicus	44.57	2.00e-44	171.00
IUUC-Spo-108336	Schizosaccharomyces pombe	45.66	8.00e-42	163.00
IUUC-Smo-109109	Selaginella moellendorffii	43.90	3.00e-38	150.00
IUUC-Sit-110234	Setaria italica	43.03	3.00e-32	130.00
IUUC-Sly-111790	Solanum lycopersicum	41.61	2.00e-34	136.00
IUUC-Stu-111994	Solanum tuberosum	34.84	3.00e-37	147.00
IUUC-Sar-113374	Sorex araneus	42.64	8.00e-43	165.00
IUUC-Sbi-114766	Sorghum bicolor	43.64	1.00e-36	145.00
IUUC-Sre-115021	Sporisorium reilianum	40.31	4.00e-42	163.00
IUUC-Ssc-115474	Sus scrofa	41.71	1.00e-42	165.00
IUUC-Tgu-116649	Taeniopygia guttata	43.22	9.00e-45	172.00
IUUC-Tru-117701	Takifugu rubripes	41.21	5.00e-44	169.00
IUUC-Tni-120607	Tetraodon nigroviridis	42.50	1.00e-43	168.00
IUUC-Tca-121278	Theobroma cacao	40.13	2.00e-30	124.00
IUUC-Tre-122006	Trichoderma reesei	56.63	6.00e-83	298.00
IUUC-Tvi-122670	Trichoderma virens	56.02	2.00e-82	296.00
IUUC-Tae-122716	Triticum aestivum	43.64	4.00e-38	149.00
IUUC-Tur-126208	Triticum urartu	43.64	2.00e-38	150.00
IUUC-Tme-126908	Tuber melanosporum	48.03	2.00e-52	197.00
IUUC-Tbe-127394	Tupaia belangeri	42.21	3.00e-43	166.00
IUUC-Uma-129339	Ustilago maydis	36.80	9.00e-44	168.00
IUUC-Vda-129895	Verticillium dahliae	58.73	3.00e-96	343.00
IUUC-Vpa-130519	Vicugna pacos	37.71	9.00e-42	161.00
IUUC-Vvi-131382	Vitis vinifera	33.82	3.00e-31	127.00
IUUC-Xtr-131923	Xenopus tropicalis	41.71	9.00e-45	172.00
IUUC-Xma-133705	Xiphophorus maculatus	41.41	4.00e-45	172.00
IUUC-Yli-134518	Yarrowia lipolytica	47.40	2.00e-34	137.00
IUUC-Zma-135029	Zea mays	45.22	6.00e-31	125.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence