iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Nle-069738

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01008666

Gene Name

LONRF3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000014827.2	ENSNLET00000018930.1	ENSNLEP00000018034.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.30e-07	29.4	281	319
E3 activity/RING/U-box	3.60e-08	33.4	278	345

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C+  f + p+++pCgH+f+++Cl++          +++CPlC+
   Q: 281  CALCMRLFYE-PVTTPCGHTFCLKCLERC------LDHNAKCPLCK 319
           ****999977.***************999......9*********7 PP

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl....teedlvPnltlrrliqawc 69
           ++ C++ + l+ +Pv++p+G+t+  +++e++l+++ k cP+++  l    ++++   n  + +li +++
   Q: 278  DLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAK-CPLCKDGLsqclASRKYSKNVIMEELIAKFL 345
           678*********************************9.****876633336777788888888887776 PP

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

XADRRCALCG VKLSALMVAT GRARGARRAG QQPPPPPLRV NVVLSGLLGK LFPGPARASQ 60
LRHEGNRLYR ERQVEAALLK YNEAVKLAPN DHLLYSNRSQ IYFTLESHEN ALHDAEIACK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

NCCGCCGACC GGCGCTGTGC GCTGTGCGGG GTCAAGCTCT CCGCGTTGAT GGTGGCCACT 60
GGGCGGGCGC GTGGAGCCCG GCGGGCTGGG CAGCAGCCGC CGCCGCCGCC ACTGCGAGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0802--TPR repeat

Interpro

IPR023114--Elongated_TPR_rpt_dom
IPR003111--Lon_substr-bd
IPR015947--PUA-like_domain
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51787--LON_N
PS50005--TPR
PS50293--TPR_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02190--LON_substr_bdg

SMART

SM00464--LON
SM00184--RING
SM00028--TPR

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001774	Ailuropoda melanoleuca	77.95	0.00e+00	806.00
IUUC-Apl-003916	Anas platyrhynchos	61.08	0.00e+00	627.00
IUUC-Bta-012872	Bos taurus	89.37	0.00e+00	979.00
IUUC-Cel-018356	Caenorhabditis elegans	32.53	9.00e-10	55.80
IUUC-Cja-018747	Callithrix jacchus	85.86	0.00e+00	871.00
IUUC-Cfa-020101	Canis familiaris	87.43	0.00e+00	923.00
IUUC-Cpo-022041	Cavia porcellus	88.19	0.00e+00	849.00
IUUC-Csa-024034	Chlorocebus sabaeus	98.25	0.00e+00	1078.00
IUUC-Csv-026364	Ciona savignyi	46.20	2.00e-79	289.00
IUUC-Dno-029518	Dasypus novemcinctus	78.33	0.00e+00	842.00
IUUC-Dor-031132	Dipodomys ordii	74.82	0.00e+00	825.00
IUUC-Dse-031331	Dothistroma septosporum	31.69	2.00e-39	156.00
IUUC-Eca-033382	Equus caballus	90.58	0.00e+00	989.00
IUUC-Fca-035777	Felis catus	76.98	0.00e+00	709.00
IUUC-Fal-036730	Ficedula albicollis	60.38	0.00e+00	643.00
IUUC-Gmo-039110	Gadus morhua	54.29	3.00e-161	561.00
IUUC-Gga-041187	Gallus gallus	61.68	0.00e+00	716.00
IUUC-Gac-042201	Gasterosteus aculeatus	56.96	9.00e-175	607.00
IUUC-Ggo-045111	Gorilla gorilla	98.43	0.00e+00	1066.00
IUUC-Hsa-045695	Homo sapiens	98.43	0.00e+00	1064.00
IUUC-Lch-050429	Latimeria chalumnae	57.99	0.00e+00	662.00
IUUC-Lma-053145	Leptosphaeria maculans	28.67	6.00e-41	162.00
IUUC-Laf-053434	Loxodonta africana	87.41	0.00e+00	894.00
IUUC-Mcc-055249	Macaca mulatta	88.07	0.00e+00	842.00
IUUC-Mga-060131	Meleagris gallopavo	61.87	5.00e-179	620.00
IUUC-Mvi-060228	Microbotryum violaceum	34.38	6.00e-47	182.00
IUUC-Mmr-060749	Microcebus murinus	91.99	0.00e+00	1012.00
IUUC-Mdo-062261	Monodelphis domestica	59.93	0.00e+00	655.00
IUUC-Mmu-063219	Mus musculus	84.82	0.00e+00	905.00
IUUC-Mpu-066222	Mustela putorius furo	77.08	0.00e+00	817.00
IUUC-Mlu-067769	Myotis lucifugus	86.91	0.00e+00	950.00
IUUC-Ont-072029	Oreochromis niloticus	56.14	7.00e-171	593.00
IUUC-Oan-073179	Ornithorhynchus anatinus	79.13	2.00e-166	578.00
IUUC-Ocu-074884	Oryctolagus cuniculus	86.76	0.00e+00	931.00
IUUC-Ogl-077658	Oryza glaberrima	34.04	5.00e-12	65.50
IUUC-Ome-081482	Oryza meridionalis	34.04	9.00e-12	64.30
IUUC-Osa-085978	Oryza sativa	34.04	5.00e-12	65.10
IUUC-Oga-089109	Otolemur garnettii	87.85	0.00e+00	950.00
IUUC-Oar-089903	Ovis aries	89.90	0.00e+00	985.00
IUUC-Ptr-091238	Pan troglodytes	98.07	0.00e+00	1053.00
IUUC-Pan-092379	Papio anubis	89.92	0.00e+00	1053.00
IUUC-Psi-093418	Pelodiscus sinensis	62.45	0.00e+00	668.00
IUUC-Pma-094231	Petromyzon marinus	63.24	2.00e-109	388.00
IUUC-Pno-094889	Phaeosphaeria nodorum	38.68	3.00e-41	162.00
IUUC-Pfo-097284	Poecilia formosa	54.03	2.00e-170	592.00
IUUC-Pab-098343	Pongo abelii	89.76	0.00e+00	1035.00
IUUC-Pca-100905	Procavia capensis	85.77	0.00e+00	749.00
IUUC-Pva-102242	Pteropus vampyrus	82.37	0.00e+00	859.00
IUUC-Ptt-103898	Puccinia triticina	27.15	3.00e-29	122.00
IUUC-Rno-105899	Rattus norvegicus	78.72	0.00e+00	920.00
IUUC-Sha-107565	Sarcophilus harrisii	56.93	2.00e-176	612.00
IUUC-Sja-107742	Schizosaccharomyces japonicus	36.89	3.00e-31	129.00
IUUC-Spo-108344	Schizosaccharomyces pombe	35.03	8.00e-25	108.00
IUUC-Sar-112999	Sorex araneus	61.90	1.00e-170	592.00
IUUC-Sre-114977	Sporisorium reilianum	34.63	6.00e-36	146.00
IUUC-Ssc-115705	Sus scrofa	90.94	0.00e+00	965.00
IUUC-Tgu-116978	Taeniopygia guttata	66.98	0.00e+00	731.00
IUUC-Tsy-118988	Tarsius syrichta	92.40	0.00e+00	933.00
IUUC-Tbe-127563	Tupaia belangeri	69.70	9.00e-140	489.00
IUUC-Ttr-128875	Tursiops truncatus	88.66	0.00e+00	888.00
IUUC-Vpa-130779	Vicugna pacos	95.82	5.00e-159	553.00
IUUC-Xtr-132508	Xenopus tropicalis	59.05	0.00e+00	666.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence