iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112036

Ensembl Protein ID

PGSC0003DMT400040977

UniProt Accession

M1BAQ4; M1BAQ4_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400015853	PGSC0003DMT400040977	PGSC0003DMT400040977

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	56.65	0.00e+00	748.00	IUUC-Ath-006790

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MSKVFNFSGD DAFYHGGAVY PSPKESSLFL SLGNHVDVYF PPCKRSRVAV PFVFTEKKQK 60
LSSIDVLPDE CLFEVLRRLS DGKERSASAC VSKRWLMLLS SIHGDETVIS DLNPSLETEE 120

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Nucleotide Sequence
(Fasta)

CAAAAATATA GATAGAAGAC AGCACCACCC ACACACAAAC CTCATTGTTT TGTACCTCAT 60
CCTCCTTCTA CCTCTTTTTT CTCTCTTTTT GCCCTATTCA ATAGGGTTTC CAAATGATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR006553--Leu-rich_rpt_Cys-con_subtyp

Pfam

PF00646--F-box
PF13516--LRR_6

SMART

SM00256--FBOX
SM00367--LRR_CC

KEGG

sot:102605047

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000881	Aegilops tauschii	51.06	1.00e-164	572.00
IUUC-Atr-002552	Amborella trichopoda	54.38	0.00e+00	657.00
IUUC-Apl-003807	Anas platyrhynchos	28.61	6.00e-32	130.00
IUUC-Aly-006311	Arabidopsis lyrata	56.50	0.00e+00	724.00
IUUC-Ath-006790	Arabidopsis thaliana	56.65	0.00e+00	728.00
IUUC-Bdi-014596	Brachypodium distachyon	51.15	1.00e-167	582.00
IUUC-Bol-015153	Brassica oleracea	54.69	0.00e+00	690.00
IUUC-Bra-017379	Brassica rapa	54.15	0.00e+00	662.00
IUUC-Cin-025793	Ciona intestinalis	26.75	1.00e-30	127.00
IUUC-Csv-026303	Ciona savignyi	26.35	2.00e-32	132.00
IUUC-Cme-027303	Cyanidioschyzon merolae	27.80	3.00e-15	75.90
IUUC-Dor-030835	Dipodomys ordii	35.29	2.00e-14	72.80
IUUC-Gma-042946	Glycine max	61.93	0.00e+00	822.00
IUUC-Hvu-047403	Hordeum vulgare	52.79	2.00e-152	531.00
IUUC-Lpe-051075	Leersia perrieri	50.00	1.00e-163	568.00
IUUC-Loc-052210	Lepisosteus oculatus	29.12	4.00e-34	137.00
IUUC-Mtr-057658	Medicago truncatula	61.81	0.00e+00	799.00
IUUC-Mac-065656	Musa acuminata	53.45	0.00e+00	634.00
IUUC-Oba-075482	Oryza barthii	50.40	3.00e-167	580.00
IUUC-Obr-076655	Oryza brachyantha	52.19	3.00e-135	474.00
IUUC-Ogl-077627	Oryza glaberrima	50.56	5.00e-168	583.00
IUUC-Ogu-078848	Oryza glumaepatula	50.24	3.00e-167	580.00
IUUC-Oin-079776	Oryza indica	50.40	5.00e-167	579.00
IUUC-Olo-080728	Oryza longistaminata	52.41	4.00e-136	476.00
IUUC-Ome-081750	Oryza meridionalis	51.32	1.00e-168	585.00
IUUC-Oni-082957	Oryza nivara	50.56	5.00e-168	583.00
IUUC-Opu-083568	Oryza punctata	50.25	8.00e-166	575.00
IUUC-Oru-084584	Oryza rufipogon	50.98	3.00e-166	577.00
IUUC-Osa-085423	Oryza sativa	50.98	3.00e-166	577.00
IUUC-Olu-087859	Ostreococcus lucimarinus	26.88	1.00e-04	40.00
IUUC-Pma-094494	Petromyzon marinus	30.60	1.00e-28	119.00
IUUC-Ppa-095810	Physcomitrella patens	35.39	3.00e-93	335.00
IUUC-Pop-098975	Populus trichocarpa	63.49	0.00e+00	843.00
IUUC-Ppe-101207	Prunus persica	62.50	0.00e+00	831.00
IUUC-Sja-107860	Schizosaccharomyces japonicus	23.98	1.00e-18	86.30
IUUC-Smo-109612	Selaginella moellendorffii	35.46	2.00e-107	381.00
IUUC-Sly-111002	Solanum lycopersicum	94.92	0.00e+00	1274.00
IUUC-Sbi-114535	Sorghum bicolor	50.83	1.00e-169	588.00
IUUC-Tca-121078	Theobroma cacao	64.35	0.00e+00	810.00
IUUC-Tae-125289	Triticum aestivum	51.08	2.00e-162	564.00
IUUC-Tur-126530	Triticum urartu	52.65	2.00e-134	471.00
IUUC-Vvi-131401	Vitis vinifera	64.64	0.00e+00	800.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence