iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cre-022743

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS496170

Gene Name

CHLREDRAFT_122373

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_122373	EDO97669	EDO97669

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.00e-08	35.1	292	333

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlp...CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e++ +   ++    CgHvfh++Cl  w        ++++CP+Cr
   Q: 292  CIICREEMAE-AGSNKrlfCGHVFHLHCLRSW------LERQQNCPTCR 333
           ********55.33222444*************......**********8 PP

Organism

Chlamydomonas reinhardtii

Protein Sequence
(Fasta)

MGFTLGRYVS LSVLAAGAVV YHAFATRQYF YRSTIYLSSS KIAVAAMGNL AFALALVTNQ 60
LVIKLFLGSL RDIEQEMIRE RLSSAVMESL LALTIFREEF SAFFVAMFAS LVFIKVMHWL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCTTCA CTCTGGGCCG CTACGTCTCG TTGAGCGTGC TGGCAGCGGG CGCAGTGGTG 60
TACCATGCCT TCGCGACACG CCAATAGTGA GTCGAGGCCT GCCGGCTTTT CTGCTTGTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:0044322--C:endoplasmic reticulum quality control compartment
GO:0000836--C:Hrd1p ubiquitin ligase complex
GO:0016021--C:integral component of membrane
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:1990381--F:ubiquitin-specific protease binding
GO:0051082--F:unfolded protein binding
GO:0008270--F:zinc ion binding
GO:0030968--P:endoplasmic reticulum unfolded protein response
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0030433--P:ubiquitin-dependent ERAD pathway

KEGG

cre:CHLREDRAFT_122373

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000344	Aegilops tauschii	42.94	3.00e-67	247.00
IUUC-Aml-001539	Ailuropoda melanoleuca	39.26	5.00e-67	246.00
IUUC-Atr-002892	Amborella trichopoda	49.25	1.00e-92	331.00
IUUC-Apl-003404	Anas platyrhynchos	27.07	1.00e-25	109.00
IUUC-Aca-004799	Anolis carolinensis	39.23	2.00e-63	235.00
IUUC-Aly-006352	Arabidopsis lyrata	52.25	2.00e-97	347.00
IUUC-Ath-006773	Arabidopsis thaliana	52.25	1.00e-97	348.00
IUUC-Ago-007894	Ashbya gossypii	25.00	1.00e-17	82.40
IUUC-Acl-008041	Aspergillus clavatus	33.93	4.00e-56	211.00
IUUC-Afl-008427	Aspergillus flavus	36.44	4.00e-55	207.00
IUUC-Afu-009023	Aspergillus fumigatus	34.52	5.00e-56	210.00
IUUC-Ani-009133	Aspergillus nidulans	36.68	3.00e-60	224.00
IUUC-Ang-009612	Aspergillus niger	38.18	1.00e-56	213.00
IUUC-Aor-010045	Aspergillus oryzae	35.56	5.00e-59	220.00
IUUC-Ate-010533	Aspergillus terreus	35.84	6.00e-57	213.00
IUUC-Ame-011083	Astyanax mexicanus	38.61	2.00e-65	241.00
IUUC-Bgr-012122	Blumeria graminis	30.36	8.00e-50	190.00
IUUC-Bta-013375	Bos taurus	39.57	3.00e-67	247.00
IUUC-Bci-013675	Botrytis cinerea	33.41	7.00e-49	187.00
IUUC-Bdi-015070	Brachypodium distachyon	49.25	4.00e-90	323.00
IUUC-Bol-015593	Brassica oleracea	50.15	5.00e-97	346.00
IUUC-Bra-017516	Brassica rapa	49.70	4.00e-96	343.00
IUUC-Cel-018422	Caenorhabditis elegans	39.35	1.00e-63	236.00
IUUC-Cja-019779	Callithrix jacchus	37.73	3.00e-59	221.00
IUUC-Cfa-020189	Canis familiaris	39.57	2.00e-66	245.00
IUUC-Cpo-022209	Cavia porcellus	39.88	2.00e-67	248.00
IUUC-Csa-023571	Chlorocebus sabaeus	39.57	4.00e-67	247.00
IUUC-Cho-024889	Choloepus hoffmanni	34.33	2.00e-57	214.00
IUUC-Cin-025215	Ciona intestinalis	24.68	8.00e-25	106.00
IUUC-Csv-026160	Ciona savignyi	35.74	2.00e-54	204.00
IUUC-Cne-027002	Cryptococcus neoformans	42.09	2.00e-71	261.00
IUUC-Cme-027285	Cyanidioschyzon merolae	40.88	2.00e-55	208.00
IUUC-Dre-027999	Danio rerio	38.61	5.00e-65	240.00
IUUC-Dno-029250	Dasypus novemcinctus	39.57	4.00e-67	247.00
IUUC-Dor-030718	Dipodomys ordii	38.65	2.00e-62	232.00
IUUC-Dse-031498	Dothistroma septosporum	29.46	5.00e-44	171.00
IUUC-Dme-031969	Drosophila melanogaster	36.76	2.00e-64	238.00
IUUC-Ete-032962	Echinops telfairi	25.97	2.00e-23	102.00
IUUC-Eca-033258	Equus caballus	39.57	3.00e-67	247.00
IUUC-Eeu-034515	Erinaceus europaeus	53.33	5.00e-10	57.40
IUUC-Fca-035980	Felis catus	39.57	3.00e-67	247.00
IUUC-Fal-037554	Ficedula albicollis	38.92	1.00e-28	119.00
IUUC-Fox-037902	Fusarium oxysporum	45.95	2.00e-36	145.00
IUUC-Fso-038418	Fusarium solani	33.17	1.00e-54	206.00
IUUC-Gmo-039288	Gadus morhua	38.32	1.00e-63	235.00
IUUC-Ggr-040076	Gaeumannomyces graminis	33.08	8.00e-52	197.00
IUUC-Gga-040575	Gallus gallus	25.78	3.00e-27	114.00
IUUC-Gac-042347	Gasterosteus aculeatus	38.29	2.00e-64	238.00
IUUC-Gma-044123	Glycine max	50.45	5.00e-94	336.00
IUUC-Ggo-044858	Gorilla gorilla	39.57	3.00e-67	247.00
IUUC-Hsa-046412	Homo sapiens	39.57	5.00e-67	247.00
IUUC-Hvu-047279	Hordeum vulgare	48.65	5.00e-89	319.00
IUUC-Itr-048924	Ictidomys tridecemlineatus	39.57	3.00e-67	247.00
IUUC-Kpa-049117	Komagataella pastoris	26.48	3.00e-23	101.00
IUUC-Lch-050491	Latimeria chalumnae	25.55	4.00e-24	104.00
IUUC-Lpe-051229	Leersia perrieri	38.14	7.00e-49	186.00
IUUC-Loc-052843	Lepisosteus oculatus	37.62	1.00e-40	158.00
IUUC-Lma-052997	Leptosphaeria maculans	32.98	6.00e-55	207.00
IUUC-Laf-053482	Loxodonta africana	39.57	2.00e-67	248.00
IUUC-Mcc-055075	Macaca mulatta	39.57	4.00e-67	247.00
IUUC-Meu-056683	Macropus eugenii	41.86	5.00e-54	203.00
IUUC-Mor-057082	Magnaporthe oryzae	34.10	5.00e-59	221.00
IUUC-Mpo-057573	Magnaporthe poae	33.08	2.00e-50	191.00
IUUC-Mtr-058601	Medicago truncatula	49.25	2.00e-97	348.00
IUUC-Mla-059168	Melampsora laricipopulina	37.64	7.00e-67	246.00
IUUC-Mga-059937	Meleagris gallopavo	25.87	1.00e-26	112.00
IUUC-Mvi-060515	Microbotryum violaceum	39.19	5.00e-56	210.00
IUUC-Mmr-060922	Microcebus murinus	39.57	9.00e-67	246.00
IUUC-Mdo-062491	Monodelphis domestica	39.88	3.00e-65	241.00
IUUC-Mmu-063770	Mus musculus	39.57	4.00e-67	247.00
IUUC-Mac-064789	Musa acuminata	49.25	6.00e-95	339.00
IUUC-Mpu-066107	Mustela putorius furo	39.57	2.00e-67	248.00
IUUC-Mlu-067918	Myotis lucifugus	38.26	2.00e-62	231.00
IUUC-Nfi-068389	Neosartorya fischeri	34.45	1.00e-55	209.00
IUUC-Ncr-068742	Neurospora crassa	34.33	1.00e-50	192.00
IUUC-Nle-069139	Nomascus leucogenys	39.57	5.00e-67	247.00
IUUC-Opr-070898	Ochotona princeps	37.81	1.00e-37	149.00
IUUC-Ont-071991	Oreochromis niloticus	38.79	8.00e-67	246.00
IUUC-Oan-073717	Ornithorhynchus anatinus	25.65	6.00e-26	110.00
IUUC-Ocu-074065	Oryctolagus cuniculus	39.57	1.00e-67	249.00
IUUC-Oba-075221	Oryza barthii	48.95	7.00e-88	315.00
IUUC-Obr-076914	Oryza brachyantha	50.17	2.00e-82	297.00
IUUC-Ogu-078124	Oryza glumaepatula	48.95	8.00e-88	315.00
IUUC-Oin-080013	Oryza indica	47.75	7.00e-85	305.00
IUUC-Olo-080247	Oryza longistaminata	47.53	7.00e-82	295.00
IUUC-Ome-081769	Oryza meridionalis	49.55	6.00e-91	325.00
IUUC-Oni-082946	Oryza nivara	48.95	8.00e-88	315.00
IUUC-Opu-083268	Oryza punctata	44.55	3.00e-69	254.00
IUUC-Oru-085114	Oryza rufipogon	48.95	8.00e-88	315.00
IUUC-Osa-085829	Oryza sativa	49.55	7.00e-91	325.00
IUUC-Ola-087449	Oryzias latipes	38.29	4.00e-65	240.00
IUUC-Olu-087894	Ostreococcus lucimarinus	56.68	5.00e-100	355.00
IUUC-Oga-089036	Otolemur garnettii	39.57	3.00e-67	247.00
IUUC-Oar-089715	Ovis aries	39.57	5.00e-67	247.00
IUUC-Ptr-091000	Pan troglodytes	39.57	4.00e-67	247.00
IUUC-Pan-092187	Papio anubis	39.57	4.00e-67	247.00
IUUC-Psi-093377	Pelodiscus sinensis	38.91	1.00e-59	222.00
IUUC-Pma-094759	Petromyzon marinus	39.86	4.00e-29	120.00
IUUC-Pno-094883	Phaeosphaeria nodorum	35.12	7.00e-58	216.00
IUUC-Ppa-095684	Physcomitrella patens	53.27	1.00e-92	332.00
IUUC-Pfo-096861	Poecilia formosa	38.34	2.00e-63	234.00
IUUC-Pab-098030	Pongo abelii	39.57	4.00e-67	247.00
IUUC-Pop-099245	Populus trichocarpa	48.65	1.00e-96	345.00
IUUC-Pca-100191	Procavia capensis	38.65	1.00e-63	235.00
IUUC-Ppe-101829	Prunus persica	50.15	1.00e-99	355.00
IUUC-Pva-102689	Pteropus vampyrus	39.26	3.00e-67	247.00
IUUC-Pgr-103286	Puccinia graminis	35.47	9.00e-62	229.00
IUUC-Ptt-103919	Puccinia triticina	35.65	6.00e-62	229.00
IUUC-Pte-104372	Pyrenophora teres	35.38	5.00e-60	224.00
IUUC-Pyt-104456	Pyrenophora triticirepentis	35.38	5.00e-59	220.00
IUUC-Rno-105723	Rattus norvegicus	39.57	3.00e-67	247.00
IUUC-Sce-106348	Saccharomyces cerevisiae	23.32	3.00e-19	88.20
IUUC-Sha-107300	Sarcophilus harrisii	41.86	4.00e-54	204.00
IUUC-Sja-107685	Schizosaccharomyces japonicus	27.98	4.00e-29	120.00
IUUC-Spo-108308	Schizosaccharomyces pombe	30.18	2.00e-36	145.00
IUUC-Ssl-108558	Sclerotinia sclerotiorum	34.56	8.00e-41	160.00
IUUC-Smo-109223	Selaginella moellendorffii	53.75	9.00e-97	345.00
IUUC-Sit-110276	Setaria italica	48.65	2.00e-88	317.00
IUUC-Sly-111819	Solanum lycopersicum	50.50	5.00e-90	322.00
IUUC-Stu-112048	Solanum tuberosum	49.39	1.00e-92	331.00
IUUC-Sar-113397	Sorex araneus	29.10	7.00e-25	106.00
IUUC-Sbi-114027	Sorghum bicolor	50.45	1.00e-98	351.00
IUUC-Sre-115212	Sporisorium reilianum	35.84	2.00e-57	215.00
IUUC-Ssc-116323	Sus scrofa	39.88	2.00e-67	248.00
IUUC-Tgu-116717	Taeniopygia guttata	25.55	4.00e-26	111.00
IUUC-Tru-118045	Takifugu rubripes	38.65	7.00e-66	243.00
IUUC-Tsy-118823	Tarsius syrichta	33.33	3.00e-46	176.00
IUUC-Tni-120106	Tetraodon nigroviridis	39.44	4.00e-48	184.00
IUUC-Tca-121462	Theobroma cacao	51.05	3.00e-96	343.00
IUUC-Tre-122204	Trichoderma reesei	45.77	5.00e-36	144.00
IUUC-Tvi-122550	Trichoderma virens	44.59	3.00e-36	145.00
IUUC-Tae-124064	Triticum aestivum	50.15	1.00e-91	328.00
IUUC-Tur-126538	Triticum urartu	43.12	1.00e-62	232.00
IUUC-Tme-127197	Tuber melanosporum	41.33	2.00e-65	242.00
IUUC-Tbe-127385	Tupaia belangeri	35.58	1.00e-57	216.00
IUUC-Ttr-128795	Tursiops truncatus	39.57	4.00e-67	247.00
IUUC-Uma-129401	Ustilago maydis	33.89	5.00e-48	184.00
IUUC-Vda-129968	Verticillium dahliae	32.02	6.00e-50	190.00
IUUC-Vpa-130483	Vicugna pacos	24.75	1.00e-23	102.00
IUUC-Vvi-130944	Vitis vinifera	51.35	3.00e-96	343.00
IUUC-Xtr-131884	Xenopus tropicalis	39.57	2.00e-64	238.00
IUUC-Xma-133488	Xiphophorus maculatus	38.65	7.00e-64	236.00
IUUC-Yli-134552	Yarrowia lipolytica	28.03	1.00e-36	145.00
IUUC-Zma-135183	Zea mays	49.84	2.00e-84	304.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence