iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017510

Ensembl Protein ID

Bra030592.1-P

UniProt Accession

M4EP72; M4EP72_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra030592	Bra030592.1	Bra030592.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	5.50e-07	30.5	115	154

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraa.nnnleaAveyLldg 41
           d+ +le+l+ MGF++ +a +aL  + n +leaAv+++ ++
   Q: 115  DKNILEELEGMGFPKARATRALHYSgNASLEAAVNWVVEH 154
           6779********************************9876 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MAGVSLKCGD CGALLKSVEE AQEHAELTSH SNFAESTEAV LNLVCTTCSK PCRSKTESDL 60
HTKRTGHTEF VDKTMETVKP ISLEAPKAAA MEIDNIDGSS GSGDASEEMV VPGVDKNILE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGGAG TATCGCTAAA GTGTGGTGAT TGTGGCGCGC TGCTGAAGTC AGTGGAGGAG 60
GCTCAGGAGC ATGCGGAGCT CACCTCTCAC TCCAATTTCG CAGAGTCCAC TGAAGCGGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR018997--PUB_domain
IPR015940--UBA
IPR009060--UBA-like
IPR013087--Znf_C2H2_type

PROSITE

PS50030--UBA
PS00028--ZINC_FINGER_C2H2_1

Pfam

PF09409--PUB
PF00627--UBA

SMART

SM00580--PUG
SM00165--UBA

Gene Ontology

GO:0005829--C:cytosol
GO:0046872--F:metal ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005639	Arabidopsis lyrata	91.35	0.00e+00	659.00
IUUC-Ath-006887	Arabidopsis thaliana	91.11	0.00e+00	634.00
IUUC-Bdi-014311	Brachypodium distachyon	71.81	8.00e-137	479.00
IUUC-Csv-026379	Ciona savignyi	40.00	2.00e-06	47.00
IUUC-Dre-027745	Danio rerio	47.54	5.00e-11	61.20
IUUC-Gac-042481	Gasterosteus aculeatus	44.29	3.00e-10	58.90
IUUC-Hvu-047779	Hordeum vulgare	77.02	4.00e-59	221.00
IUUC-Lch-049508	Latimeria chalumnae	57.41	6.00e-13	67.80
IUUC-Mtr-058099	Medicago truncatula	76.57	2.00e-149	521.00
IUUC-Mac-065072	Musa acuminata	67.39	2.00e-64	238.00
IUUC-Oan-073484	Ornithorhynchus anatinus	41.67	1.00e-09	57.80
IUUC-Obr-076923	Oryza brachyantha	74.69	1.00e-132	466.00
IUUC-Olo-080934	Oryza longistaminata	66.51	1.00e-114	405.00
IUUC-Oni-082110	Oryza nivara	42.42	6.00e-61	227.00
IUUC-Olu-087606	Ostreococcus lucimarinus	44.35	9.00e-27	114.00
IUUC-Pma-094284	Petromyzon marinus	43.86	3.00e-09	52.80
IUUC-Ppa-095484	Physcomitrella patens	68.12	3.00e-127	447.00
IUUC-Pfo-096188	Poecilia formosa	50.94	3.00e-10	58.90
IUUC-Pop-099678	Populus trichocarpa	82.41	3.00e-167	580.00
IUUC-Tru-117839	Takifugu rubripes	45.61	4.00e-10	58.50
IUUC-Tni-120504	Tetraodon nigroviridis	43.86	2.00e-10	59.30
IUUC-Uma-129569	Ustilago maydis	47.22	4.00e-04	38.50
IUUC-Xtr-132119	Xenopus tropicalis	50.85	7.00e-11	60.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence