iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fal-036648

Ensembl Protein ID

ENSFALP00000007762.1

UniProt Accession

U3JYA8; U3JYA8_FICAL

Genbank Protein ID

ENSFALP00000007762

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTO01000569

Gene Name

RFWD3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFALG00000007435.1	ENSFALT00000007794.1	ENSFALP00000007762.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-06	28.3	515	545
E3 activity/RING/RING	8.60e-06	25.9	262	306

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf..sd.tllvsGsdDgtikvWDlrt 32
           +v+++++  +d +++ +G  +g+i+++Dlr+
   Q: 515  PVWSCCWclDDtNYVYAGLVNGSIMIYDLRD 545
           79******9888****************997 PP

E3 activity/RING/RING

   S: 1    CaiCledf.....kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC+e        + +  l+CgH+f  +C+++w     ++ ++ +CP C+
   Q: 262  CAICFEQWtnaggHR-LSALRCGHLFGYTCIERW-----LKGQAGKCPQCN 306
           ******996666444.77899*************.....4555559***96 PP

Organism

Ficedula albicollis

Protein Sequence
(Fasta)

MAQEEMEVDL QPVAGYSVET LQTLAPEPSG HTELSHLPVL GEGGGSAAAL PADDAVVTPS 60
AGTTRGAAAE PDLQVNPATA PDGLQRLQEA LDLYQQSVPQ PTQRPQVRRA RRQQRVGGSQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTCAAG AAGAGATGGA AGTTGATCTC CAGCCCGTGG CTGGTTACTC AGTGGAGACT 60
CTCCAGACAC TTGCCCCGGA GCCCTCTGGT CACACAGAGC TCTCCCACCT TCCTGTGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0035861--C:site of double-strand break
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0031571--P:mitotic G1 DNA damage checkpoint
GO:2000001--P:regulation of DNA damage checkpoint
GO:0010212--P:response to ionizing radiation

KEGG

fab:101820826

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000929	Aegilops tauschii	25.36	5.00e-18	85.50
IUUC-Aml-001188	Ailuropoda melanoleuca	71.96	0.00e+00	779.00
IUUC-Atr-003034	Amborella trichopoda	30.91	4.00e-20	91.70
IUUC-Apl-003182	Anas platyrhynchos	91.63	0.00e+00	959.00
IUUC-Aca-004619	Anolis carolinensis	80.16	0.00e+00	881.00
IUUC-Aly-006391	Arabidopsis lyrata	23.95	9.00e-32	131.00
IUUC-Ath-007300	Arabidopsis thaliana	25.00	4.00e-34	139.00
IUUC-Ame-010890	Astyanax mexicanus	66.06	0.00e+00	691.00
IUUC-Bta-013051	Bos taurus	69.20	0.00e+00	761.00
IUUC-Bdi-014519	Brachypodium distachyon	23.94	7.00e-24	105.00
IUUC-Bol-015271	Brassica oleracea	27.92	1.00e-33	137.00
IUUC-Bra-017931	Brassica rapa	28.17	5.00e-34	139.00
IUUC-Cja-019240	Callithrix jacchus	60.00	0.00e+00	767.00
IUUC-Cfa-021010	Canis familiaris	62.64	0.00e+00	778.00
IUUC-Cpo-022308	Cavia porcellus	65.23	0.00e+00	718.00
IUUC-Csa-023501	Chlorocebus sabaeus	67.91	0.00e+00	761.00
IUUC-Cho-024900	Choloepus hoffmanni	61.97	0.00e+00	684.00
IUUC-Cin-025403	Ciona intestinalis	37.76	5.00e-99	355.00
IUUC-Csv-025819	Ciona savignyi	38.46	7.00e-48	183.00
IUUC-Cme-027123	Cyanidioschyzon merolae	25.14	3.00e-20	93.20
IUUC-Dre-028354	Danio rerio	60.82	2.00e-178	619.00
IUUC-Dno-029400	Dasypus novemcinctus	63.36	0.00e+00	775.00
IUUC-Dor-030320	Dipodomys ordii	60.50	0.00e+00	641.00
IUUC-Dme-031949	Drosophila melanogaster	27.01	2.00e-41	163.00
IUUC-Ete-032691	Echinops telfairi	59.70	2.00e-100	359.00
IUUC-Eca-034320	Equus caballus	61.37	0.00e+00	791.00
IUUC-Fca-035732	Felis catus	68.50	0.00e+00	769.00
IUUC-Gmo-038609	Gadus morhua	62.20	2.00e-154	538.00
IUUC-Gga-040522	Gallus gallus	74.16	1.00e-171	595.00
IUUC-Gac-042318	Gasterosteus aculeatus	60.48	3.00e-149	521.00
IUUC-Gma-043184	Glycine max	28.79	3.00e-28	120.00
IUUC-Ggo-044464	Gorilla gorilla	61.88	0.00e+00	762.00
IUUC-Hsa-045991	Homo sapiens	61.72	0.00e+00	764.00
IUUC-Hvu-047705	Hordeum vulgare	25.19	2.00e-29	124.00
IUUC-Itr-047977	Ictidomys tridecemlineatus	69.59	0.00e+00	774.00
IUUC-Lch-050112	Latimeria chalumnae	72.57	0.00e+00	749.00
IUUC-Lpe-051605	Leersia perrieri	26.47	4.00e-18	86.30
IUUC-Loc-052241	Lepisosteus oculatus	69.04	0.00e+00	689.00
IUUC-Laf-054559	Loxodonta africana	69.01	0.00e+00	684.00
IUUC-Mcc-055093	Macaca mulatta	68.41	0.00e+00	763.00
IUUC-Meu-056417	Macropus eugenii	65.61	0.00e+00	672.00
IUUC-Mtr-058533	Medicago truncatula	26.13	1.00e-32	134.00
IUUC-Mga-059498	Meleagris gallopavo	73.05	0.00e+00	887.00
IUUC-Mmr-061782	Microcebus murinus	66.97	0.00e+00	747.00
IUUC-Mdo-062053	Monodelphis domestica	73.49	0.00e+00	774.00
IUUC-Mmu-063352	Mus musculus	65.49	0.00e+00	707.00
IUUC-Mac-064582	Musa acuminata	28.72	1.00e-25	111.00
IUUC-Mpu-066087	Mustela putorius furo	61.08	0.00e+00	766.00
IUUC-Mlu-068147	Myotis lucifugus	68.08	0.00e+00	720.00
IUUC-Nle-069503	Nomascus leucogenys	58.05	0.00e+00	707.00
IUUC-Opr-070479	Ochotona princeps	64.85	0.00e+00	681.00
IUUC-Ont-071700	Oreochromis niloticus	63.12	0.00e+00	659.00
IUUC-Oan-073702	Ornithorhynchus anatinus	79.64	0.00e+00	829.00
IUUC-Ocu-074886	Oryctolagus cuniculus	67.17	0.00e+00	747.00
IUUC-Oba-075729	Oryza barthii	26.51	3.00e-27	116.00
IUUC-Obr-076562	Oryza brachyantha	26.59	4.00e-22	99.40
IUUC-Ogl-077615	Oryza glaberrima	26.51	3.00e-27	116.00
IUUC-Ogu-078921	Oryza glumaepatula	26.51	7.00e-28	118.00
IUUC-Oin-079250	Oryza indica	25.65	3.00e-20	92.80
IUUC-Olo-080758	Oryza longistaminata	26.19	6.00e-26	112.00
IUUC-Ome-081707	Oryza meridionalis	24.85	3.00e-23	103.00
IUUC-Oni-083006	Oryza nivara	26.51	1.00e-27	117.00
IUUC-Opu-083650	Oryza punctata	26.12	1.00e-26	114.00
IUUC-Oru-084924	Oryza rufipogon	26.43	3.00e-28	119.00
IUUC-Osa-085820	Oryza sativa	25.98	5.00e-28	119.00
IUUC-Ola-087229	Oryzias latipes	63.96	2.00e-157	548.00
IUUC-Oga-088243	Otolemur garnettii	70.37	0.00e+00	744.00
IUUC-Oar-089461	Ovis aries	69.40	0.00e+00	764.00
IUUC-Ptr-090527	Pan troglodytes	61.72	0.00e+00	759.00
IUUC-Pan-092431	Papio anubis	67.62	0.00e+00	692.00
IUUC-Psi-093156	Pelodiscus sinensis	69.02	0.00e+00	1012.00
IUUC-Pno-094897	Phaeosphaeria nodorum	25.21	1.00e-07	50.80
IUUC-Ppa-095305	Physcomitrella patens	39.37	3.00e-22	100.00
IUUC-Pfo-097065	Poecilia formosa	62.03	5.00e-180	624.00
IUUC-Pab-098272	Pongo abelii	62.04	0.00e+00	765.00
IUUC-Pop-099827	Populus trichocarpa	25.48	3.00e-33	136.00
IUUC-Pca-100713	Procavia capensis	60.65	0.00e+00	647.00
IUUC-Ppe-102103	Prunus persica	25.23	3.00e-33	136.00
IUUC-Pva-103133	Pteropus vampyrus	68.60	6.00e-174	603.00
IUUC-Pte-104191	Pyrenophora teres	37.08	1.00e-07	50.40
IUUC-Pyt-104734	Pyrenophora triticirepentis	50.00	7.00e-08	51.20
IUUC-Sha-107628	Sarcophilus harrisii	57.68	0.00e+00	781.00
IUUC-Ssl-108490	Sclerotinia sclerotiorum	32.31	2.00e-06	46.60
IUUC-Sit-109891	Setaria italica	24.62	3.00e-27	116.00
IUUC-Sly-111779	Solanum lycopersicum	29.37	1.00e-32	134.00
IUUC-Stu-112817	Solanum tuberosum	43.55	2.00e-21	95.90
IUUC-Sar-113124	Sorex araneus	63.71	2.00e-143	503.00
IUUC-Sbi-114107	Sorghum bicolor	26.10	3.00e-29	122.00
IUUC-Ssc-115850	Sus scrofa	71.98	0.00e+00	757.00
IUUC-Tgu-117295	Taeniopygia guttata	95.67	0.00e+00	994.00
IUUC-Tru-117539	Takifugu rubripes	62.55	0.00e+00	642.00
IUUC-Tsy-118805	Tarsius syrichta	57.63	2.00e-91	329.00
IUUC-Tni-120274	Tetraodon nigroviridis	62.55	0.00e+00	639.00
IUUC-Tca-121162	Theobroma cacao	29.93	4.00e-32	132.00
IUUC-Tae-124822	Triticum aestivum	26.10	1.00e-30	127.00
IUUC-Tur-126162	Triticum urartu	24.84	2.00e-21	97.40
IUUC-Tbe-127884	Tupaia belangeri	75.00	1.00e-57	217.00
IUUC-Ttr-128665	Tursiops truncatus	68.65	6.00e-109	388.00
IUUC-Uma-129349	Ustilago maydis	33.33	1.00e-06	48.10
IUUC-Vpa-130385	Vicugna pacos	62.23	0.00e+00	778.00
IUUC-Vvi-131464	Vitis vinifera	27.16	5.00e-28	119.00
IUUC-Xtr-132015	Xenopus tropicalis	74.61	0.00e+00	779.00
IUUC-Xma-133109	Xiphophorus maculatus	62.85	6.00e-179	620.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence