iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-049516

Ensembl Protein ID

ENSLACP00000013819.1

UniProt Accession

H3AVZ8; H3AVZ8_LATCH

Genbank Protein ID

ENSLACP00000013819

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01004207

Gene Name

RNFT1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000012165.1	ENSLACT00000013916.1	ENSLACP00000013819.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.70e-10	39.4	352	390

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+ +f+d p++l C+Hvf+++C+  w       ++e +CPlCr
   Q: 352  CPICQAEFRD-PILLVCQHVFCEECISLW------FNREKTCPLCR 390
           **********.999***************......**********8 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MKHRPQRDRR FSSETKEFEK EVIIMQTNSC QQHGQLGSAT SPQSNLTSRM AVEGTGASQS 60
GEVQIQLNTS QAEHGARQGA RHSRPHVRLH SHAHTHSHSE TDSSDDSPLD SGESSGSLSE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCTTTGACC CGAAGGCCAG GTTTTTTTTT TTTTTTTTTT TGCAGGAAGT TGGCTGGTCG 60
TGGAGGTCGG TTCTGATGAG AGGCTTAGTG GAAGCTGCTT GGGGGGTTTA CCATGAAACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

lcm:102357920

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000709	Aegilops tauschii	29.77	3.00e-29	122.00
IUUC-Aml-001586	Ailuropoda melanoleuca	55.48	2.00e-116	412.00
IUUC-Apl-003875	Anas platyrhynchos	62.56	2.00e-118	418.00
IUUC-Aca-004325	Anolis carolinensis	52.52	2.00e-107	382.00
IUUC-Ame-010748	Astyanax mexicanus	62.33	2.00e-98	352.00
IUUC-Bta-013167	Bos taurus	56.29	4.00e-120	424.00
IUUC-Cja-019669	Callithrix jacchus	58.21	3.00e-126	444.00
IUUC-Cfa-020610	Canis familiaris	56.44	2.00e-120	425.00
IUUC-Cpo-021979	Cavia porcellus	57.50	1.00e-115	409.00
IUUC-Cre-022592	Chlamydomonas reinhardtii	49.09	1.00e-11	63.90
IUUC-Csa-023752	Chlorocebus sabaeus	56.84	5.00e-127	447.00
IUUC-Cho-024880	Choloepus hoffmanni	52.48	4.00e-108	384.00
IUUC-Dre-028522	Danio rerio	64.04	1.00e-99	356.00
IUUC-Dno-029312	Dasypus novemcinctus	68.84	3.00e-116	411.00
IUUC-Dor-030524	Dipodomys ordii	52.60	8.00e-77	280.00
IUUC-Dme-031681	Drosophila melanogaster	34.92	5.00e-34	139.00
IUUC-Ete-032456	Echinops telfairi	52.14	3.00e-103	368.00
IUUC-Eeu-034649	Erinaceus europaeus	46.43	1.00e-35	144.00
IUUC-Fca-036321	Felis catus	56.35	4.00e-116	410.00
IUUC-Fal-036873	Ficedula albicollis	60.31	1.00e-111	396.00
IUUC-Gmo-038501	Gadus morhua	49.65	2.00e-85	309.00
IUUC-Gga-040583	Gallus gallus	61.86	4.00e-113	400.00
IUUC-Gac-042530	Gasterosteus aculeatus	59.59	9.00e-91	327.00
IUUC-Ggo-045577	Gorilla gorilla	55.04	4.00e-122	431.00
IUUC-Hsa-046395	Homo sapiens	58.71	5.00e-126	444.00
IUUC-Itr-048888	Ictidomys tridecemlineatus	57.64	1.00e-122	432.00
IUUC-Loc-052692	Lepisosteus oculatus	55.21	5.00e-111	394.00
IUUC-Laf-054478	Loxodonta africana	58.31	4.00e-122	431.00
IUUC-Mcc-055064	Macaca mulatta	53.56	1.00e-95	342.00
IUUC-Meu-056056	Macropus eugenii	52.04	2.00e-106	379.00
IUUC-Mga-059908	Meleagris gallopavo	72.73	1.00e-96	345.00
IUUC-Mdo-063071	Monodelphis domestica	59.41	1.00e-121	429.00
IUUC-Mmu-063446	Mus musculus	56.46	6.00e-119	420.00
IUUC-Mpu-065810	Mustela putorius furo	55.83	2.00e-98	352.00
IUUC-Nle-069009	Nomascus leucogenys	56.26	2.00e-131	462.00
IUUC-Ont-071863	Oreochromis niloticus	60.96	1.00e-90	327.00
IUUC-Oan-073490	Ornithorhynchus anatinus	61.05	3.00e-124	438.00
IUUC-Ocu-074346	Oryctolagus cuniculus	59.31	7.00e-126	443.00
IUUC-Ola-086809	Oryzias latipes	59.25	1.00e-89	323.00
IUUC-Oga-087950	Otolemur garnettii	57.00	6.00e-123	433.00
IUUC-Oar-089816	Ovis aries	56.31	1.00e-121	429.00
IUUC-Ptr-090736	Pan troglodytes	58.71	6.00e-126	444.00
IUUC-Psi-093766	Pelodiscus sinensis	72.26	5.00e-118	417.00
IUUC-Ppa-095990	Physcomitrella patens	30.10	5.00e-35	142.00
IUUC-Pfo-097090	Poecilia formosa	61.99	1.00e-86	313.00
IUUC-Pab-098474	Pongo abelii	56.84	9.00e-126	443.00
IUUC-Pop-098860	Populus trichocarpa	31.06	8.00e-39	154.00
IUUC-Rno-105126	Rattus norvegicus	56.75	5.00e-120	424.00
IUUC-Sce-106136	Saccharomyces cerevisiae	52.78	5.00e-06	46.20
IUUC-Sha-107537	Sarcophilus harrisii	59.06	1.00e-122	432.00
IUUC-Sar-113494	Sorex araneus	68.00	2.00e-35	143.00
IUUC-Tgu-117409	Taeniopygia guttata	70.55	1.00e-112	399.00
IUUC-Tru-117926	Takifugu rubripes	51.66	4.00e-89	321.00
IUUC-Tsy-118995	Tarsius syrichta	55.58	3.00e-121	428.00
IUUC-Tni-120361	Tetraodon nigroviridis	60.62	3.00e-94	338.00
IUUC-Tur-126400	Triticum urartu	30.69	3.00e-37	149.00
IUUC-Tbe-128158	Tupaia belangeri	41.87	7.00e-69	254.00
IUUC-Ttr-128496	Tursiops truncatus	55.56	6.00e-118	417.00
IUUC-Vpa-130045	Vicugna pacos	53.36	3.00e-67	248.00
IUUC-Xtr-132923	Xenopus tropicalis	54.33	2.00e-105	375.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence