iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-049533

Ensembl Protein ID

ENSLACP00000020883.1

UniProt Accession

H3BG62; H3BG62_LATCH

Genbank Protein ID

ENSLACP00000020883

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01016067

Gene Name

SYVN1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000018348.1	ENSLACT00000021023.1	ENSLACP00000020883.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.30e-09	38.7	275	314

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e++ +g + lpC+H+fh++Cl  w       +++++CP+Cr
   Q: 275  CIICREEMVTGAKRLPCNHIFHTSCLRSW------FQRQQTCPTCR 314
           ********99999****************......**********8 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MVRAAVVTAA SLILTAAVVT HAYYLKHQFY PTVVYLTKSS PSMALIILQP HTKAEKPKCL 60
FFFLKLGELG FEKLIQTSLP IPRNMLPAMF ASKVNVFFWF CFYFSQMERS PNITWLFHFR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTTCGAG CAGCAGTGGT GACGGCCGCG AGCCTGATCC TCACGGCAGC TGTAGTGACG 60
CATGCTTACT ACTTGAAGCA CCAATTCTAT CCGACTGTTG TGTACCTGAC TAAATCCAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR032832--E3_lig_synoviolin/Hrd1
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0000836--C:Hrd1p ubiquitin ligase complex
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0030433--P:ubiquitin-dependent ERAD pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000344	Aegilops tauschii	29.20	3.00e-27	115.00
IUUC-Aml-001539	Ailuropoda melanoleuca	49.13	2.00e-76	280.00
IUUC-Apl-004003	Anas platyrhynchos	52.53	2.00e-21	94.00
IUUC-Aca-004799	Anolis carolinensis	47.24	2.00e-69	256.00
IUUC-Ago-007894	Ashbya gossypii	36.27	1.00e-13	71.20
IUUC-Acl-008041	Aspergillus clavatus	42.59	4.00e-19	90.10
IUUC-Afl-008427	Aspergillus flavus	46.08	7.00e-20	92.40
IUUC-Afu-009023	Aspergillus fumigatus	44.14	4.00e-21	96.70
IUUC-Ani-009133	Aspergillus nidulans	45.92	1.00e-19	91.70
IUUC-Ang-009612	Aspergillus niger	47.47	2.00e-20	94.00
IUUC-Aor-010045	Aspergillus oryzae	46.08	6.00e-20	92.80
IUUC-Ate-010533	Aspergillus terreus	44.44	1.00e-19	91.70
IUUC-Ame-011083	Astyanax mexicanus	48.99	3.00e-68	253.00
IUUC-Bgr-012122	Blumeria graminis	43.43	2.00e-17	84.30
IUUC-Bta-013375	Bos taurus	48.98	4.00e-75	275.00
IUUC-Bci-013675	Botrytis cinerea	43.64	6.00e-19	89.40
IUUC-Cel-018422	Caenorhabditis elegans	32.45	4.00e-41	162.00
IUUC-Cja-019779	Callithrix jacchus	49.27	4.00e-75	275.00
IUUC-Cfa-020189	Canis familiaris	48.98	3.00e-75	276.00
IUUC-Cpo-022209	Cavia porcellus	48.84	2.00e-75	276.00
IUUC-Csa-023571	Chlorocebus sabaeus	48.98	2.00e-75	276.00
IUUC-Cho-024889	Choloepus hoffmanni	45.91	2.00e-69	256.00
IUUC-Csv-026160	Ciona savignyi	35.45	3.00e-41	162.00
IUUC-Dre-027999	Danio rerio	48.99	1.00e-69	257.00
IUUC-Dno-029250	Dasypus novemcinctus	48.84	6.00e-76	278.00
IUUC-Dor-030718	Dipodomys ordii	45.38	1.00e-66	247.00
IUUC-Dse-031498	Dothistroma septosporum	35.54	6.00e-17	82.80
IUUC-Dme-031969	Drosophila melanogaster	37.36	8.00e-51	194.00
IUUC-Eca-033258	Equus caballus	49.13	3.00e-76	279.00
IUUC-Fca-035980	Felis catus	49.42	1.00e-76	280.00
IUUC-Fal-037554	Ficedula albicollis	35.31	1.00e-28	120.00
IUUC-Fox-037902	Fusarium oxysporum	48.48	3.00e-18	87.00
IUUC-Fso-038418	Fusarium solani	45.45	4.00e-18	86.70
IUUC-Gmo-039288	Gadus morhua	47.02	3.00e-70	259.00
IUUC-Ggr-040076	Gaeumannomyces graminis	46.46	9.00e-19	89.00
IUUC-Gga-041214	Gallus gallus	96.36	2.00e-29	122.00
IUUC-Gac-042347	Gasterosteus aculeatus	47.08	2.00e-68	253.00
IUUC-Ggo-044858	Gorilla gorilla	48.99	2.00e-75	276.00
IUUC-Hsa-046412	Homo sapiens	49.13	3.00e-76	279.00
IUUC-Itr-048924	Ictidomys tridecemlineatus	48.98	4.00e-75	275.00
IUUC-Lpe-051229	Leersia perrieri	47.76	9.00e-15	74.70
IUUC-Loc-052843	Lepisosteus oculatus	54.95	1.00e-58	219.00
IUUC-Lma-052997	Leptosphaeria maculans	48.11	5.00e-22	99.80
IUUC-Laf-053482	Loxodonta africana	48.98	7.00e-75	275.00
IUUC-Mcc-055075	Macaca mulatta	49.13	2.00e-76	279.00
IUUC-Meu-056683	Macropus eugenii	53.18	5.00e-54	205.00
IUUC-Mor-057082	Magnaporthe oryzae	47.47	1.00e-19	91.70
IUUC-Mpo-057573	Magnaporthe poae	46.46	9.00e-19	88.60
IUUC-Mga-059510	Meleagris gallopavo	96.39	5.00e-45	173.00
IUUC-Mmr-060922	Microcebus murinus	48.99	8.00e-76	278.00
IUUC-Mdo-062491	Monodelphis domestica	48.12	2.00e-73	270.00
IUUC-Mmu-063770	Mus musculus	49.13	1.00e-75	277.00
IUUC-Mpu-066107	Mustela putorius furo	49.14	2.00e-77	283.00
IUUC-Mlu-067918	Myotis lucifugus	45.14	9.00e-61	228.00
IUUC-Nfi-068389	Neosartorya fischeri	43.52	2.00e-20	94.00
IUUC-Ncr-068742	Neurospora crassa	46.46	2.00e-18	87.80
IUUC-Nle-069139	Nomascus leucogenys	49.13	3.00e-76	279.00
IUUC-Opr-070898	Ochotona princeps	53.74	1.00e-54	207.00
IUUC-Ont-071991	Oreochromis niloticus	46.88	4.00e-71	262.00
IUUC-Ocu-074065	Oryctolagus cuniculus	49.28	5.00e-76	278.00
IUUC-Ola-087449	Oryzias latipes	48.40	1.00e-67	251.00
IUUC-Oga-089036	Otolemur garnettii	48.98	3.00e-75	276.00
IUUC-Oar-089715	Ovis aries	49.13	3.00e-76	279.00
IUUC-Ptr-091000	Pan troglodytes	48.98	3.00e-75	275.00
IUUC-Pan-092187	Papio anubis	49.13	2.00e-76	280.00
IUUC-Psi-093377	Pelodiscus sinensis	47.22	9.00e-66	244.00
IUUC-Pma-094759	Petromyzon marinus	69.60	3.00e-47	182.00
IUUC-Pno-094883	Phaeosphaeria nodorum	46.39	5.00e-18	86.30
IUUC-Pfo-096861	Poecilia formosa	47.83	3.00e-71	262.00
IUUC-Pab-098030	Pongo abelii	49.13	3.00e-76	279.00
IUUC-Pca-100191	Procavia capensis	49.42	3.00e-76	279.00
IUUC-Pva-102689	Pteropus vampyrus	49.13	3.00e-76	279.00
IUUC-Pte-104372	Pyrenophora teres	47.71	1.00e-21	98.20
IUUC-Pyt-104456	Pyrenophora triticirepentis	47.17	3.00e-21	96.70
IUUC-Rno-105723	Rattus norvegicus	48.98	4.00e-75	275.00
IUUC-Sce-106348	Saccharomyces cerevisiae	39.02	2.00e-12	67.40
IUUC-Sha-107300	Sarcophilus harrisii	50.84	6.00e-55	208.00
IUUC-Sja-107685	Schizosaccharomyces japonicus	44.04	3.00e-20	92.80
IUUC-Ssl-108558	Sclerotinia sclerotiorum	43.64	6.00e-19	89.40
IUUC-Ssc-116323	Sus scrofa	48.69	3.00e-74	273.00
IUUC-Tru-118045	Takifugu rubripes	47.95	5.00e-74	271.00
IUUC-Tsy-118823	Tarsius syrichta	43.65	2.00e-59	222.00
IUUC-Tni-120106	Tetraodon nigroviridis	50.00	1.00e-47	183.00
IUUC-Tre-122204	Trichoderma reesei	48.48	2.00e-19	90.90
IUUC-Tvi-122550	Trichoderma virens	48.48	3.00e-19	90.50
IUUC-Tbe-127385	Tupaia belangeri	46.20	2.00e-70	259.00
IUUC-Ttr-128795	Tursiops truncatus	48.99	7.00e-76	278.00
IUUC-Uma-129401	Ustilago maydis	38.84	9.00e-19	88.60
IUUC-Vda-129968	Verticillium dahliae	45.00	2.00e-16	80.90
IUUC-Xtr-131884	Xenopus tropicalis	48.41	1.00e-73	271.00
IUUC-Xma-133488	Xiphophorus maculatus	48.41	4.00e-72	265.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence