iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121634

Ensembl Protein ID

EOX96634

UniProt Accession

A0A061DV19; A0A061DV19_THECC

Genbank Protein ID

EOX96634.1

Protein Name

WD-40 repeat family protein / notchless protein, putative isoform 2

Genbank Nucleotide ID

CM001879

Gene Name

TCM_005844

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_005844	EOX96633	EOX96633
TCM_005844	EOX96634	EOX96634

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.30e-61	201.4	151	187
UBD/Beta-Prp	1.10e-74	252.3	103	300

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH+++v c+a+  d ++lvsGs  g +++WD++tg++
   Q: 151  GHKNWVLCIAWsLDgKHLVSGSKSGELQCWDPHTGKP 187
           8***********666*******************986 PP

UBD/Beta-Prp

   S: 44   llrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvv 144
           + +++ gh+++v +v fspdg  l++gs D t+++wdl+t +++ t +gh++ vl++++s +g++lvsGs+   +++wd +tg+   ++l+gh++++++++
   Q: 103  CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFTCTGHKNWVLCIAWSLDGKHLVSGSKSGELQCWDPHTGKPAGNPLTGHKKWITGIS 203
           47899************************************************************************************************ PP
   S: 145  vhpdg.n....llvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsg 240
           + p   n     +vs+s+D+  r+Wd++ +k++  l+g ht +v+++++  +g  + +gs+d t+k+w+ ++g+ +r+l+gh  +v+s+++s  +e+++ +
   Q: 204  WEPLHlNapcrRFVSASKDGDARIWDISLKKCVICLSG-HTLAVTCVKWGGDG-VIYTGSQDCTIKVWETSQGKLIRELKGHGHWVNSLALS--TEYVLRT 300
           988644422228*************************9.************98.99***********************************9..5555443 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MEVETEQGET GKSVMCVLTD PEGITLGGTM YLPQNVGPIQ LQQIVNTLLK NEEKLPYAFY 60
ISNQELLVPL GTYLEKNKVS MEKTLSIVYQ PQAVFRIRPV NRCSATIAGH TEAVLSVAFS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAAAATTCC CCCAAAACTC CCACTTTCAA TCGCGCAGAA ACCAAAAACC CTAAACTCCT 60
CTAAAACCCT CTGATTTTCT CCAGAATTTC CGAATTGTTT ACAGCGAACA AAAAGGGAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR012972--NLE
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08154--NLE
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0042254--P:ribosome biogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000437	Aegilops tauschii	80.09	0.00e+00	783.00
IUUC-Aml-001793	Ailuropoda melanoleuca	58.94	9.00e-170	588.00
IUUC-Atr-002507	Amborella trichopoda	82.69	0.00e+00	826.00
IUUC-Apl-003964	Anas platyrhynchos	59.33	4.00e-161	560.00
IUUC-Aly-006396	Arabidopsis lyrata	79.66	0.00e+00	808.00
IUUC-Ath-007278	Arabidopsis thaliana	81.02	0.00e+00	809.00
IUUC-Ago-007951	Ashbya gossypii	48.41	1.00e-133	469.00
IUUC-Acl-008298	Aspergillus clavatus	45.82	1.00e-118	419.00
IUUC-Afl-008581	Aspergillus flavus	53.95	1.00e-109	388.00
IUUC-Afu-008906	Aspergillus fumigatus	45.71	2.00e-116	412.00
IUUC-Ani-009189	Aspergillus nidulans	47.58	5.00e-117	414.00
IUUC-Ang-009630	Aspergillus niger	49.45	1.00e-126	446.00
IUUC-Aor-010038	Aspergillus oryzae	47.96	6.00e-130	456.00
IUUC-Ate-010278	Aspergillus terreus	49.78	1.00e-120	425.00
IUUC-Ame-011890	Astyanax mexicanus	57.02	2.00e-160	557.00
IUUC-Bgr-012011	Blumeria graminis	51.74	2.00e-123	435.00
IUUC-Bta-012964	Bos taurus	57.87	4.00e-168	583.00
IUUC-Bci-013592	Botrytis cinerea	50.37	4.00e-118	417.00
IUUC-Bdi-015035	Brachypodium distachyon	80.47	0.00e+00	792.00
IUUC-Bol-015501	Brassica oleracea	79.92	0.00e+00	811.00
IUUC-Bra-017642	Brassica rapa	79.29	0.00e+00	806.00
IUUC-Cel-018430	Caenorhabditis elegans	53.07	3.00e-142	497.00
IUUC-Cja-019125	Callithrix jacchus	58.72	8.00e-169	585.00
IUUC-Cfa-021013	Canis familiaris	59.09	1.00e-161	561.00
IUUC-Cpo-021743	Cavia porcellus	57.87	2.00e-168	584.00
IUUC-Cre-022973	Chlamydomonas reinhardtii	51.47	1.00e-140	491.00
IUUC-Csa-024270	Chlorocebus sabaeus	58.30	5.00e-168	583.00
IUUC-Cin-025795	Ciona intestinalis	56.42	2.00e-162	565.00
IUUC-Csv-025953	Ciona savignyi	57.29	9.00e-164	568.00
IUUC-Cgl-026517	Colletotrichum gloeosporioides	51.34	7.00e-105	373.00
IUUC-Cne-026901	Cryptococcus neoformans	48.03	7.00e-132	463.00
IUUC-Cme-027281	Cyanidioschyzon merolae	48.21	5.00e-117	414.00
IUUC-Dre-028515	Danio rerio	58.30	1.00e-161	561.00
IUUC-Dno-029596	Dasypus novemcinctus	58.30	3.00e-168	583.00
IUUC-Dor-030494	Dipodomys ordii	58.09	4.00e-167	580.00
IUUC-Dse-031538	Dothistroma septosporum	49.02	5.00e-126	443.00
IUUC-Dme-031974	Drosophila melanogaster	54.70	2.00e-154	538.00
IUUC-Ete-032948	Echinops telfairi	64.42	6.00e-77	280.00
IUUC-Eca-033399	Equus caballus	58.30	3.00e-168	584.00
IUUC-Eeu-035013	Erinaceus europaeus	63.46	7.00e-76	276.00
IUUC-Fca-035860	Felis catus	57.66	2.00e-168	584.00
IUUC-Fal-037069	Ficedula albicollis	62.40	5.00e-91	326.00
IUUC-Fox-038059	Fusarium oxysporum	49.66	1.00e-120	425.00
IUUC-Fso-038445	Fusarium solani	48.97	2.00e-120	425.00
IUUC-Gmo-039319	Gadus morhua	57.73	9.00e-150	522.00
IUUC-Ggr-040095	Gaeumannomyces graminis	45.90	1.00e-119	422.00
IUUC-Gga-040303	Gallus gallus	62.00	4.00e-90	323.00
IUUC-Gac-042267	Gasterosteus aculeatus	58.35	1.00e-156	545.00
IUUC-Gma-043974	Glycine max	85.65	0.00e+00	862.00
IUUC-Ggo-044637	Gorilla gorilla	57.87	2.00e-166	578.00
IUUC-Hsa-046128	Homo sapiens	58.09	2.00e-168	584.00
IUUC-Hvu-047373	Hordeum vulgare	77.94	0.00e+00	782.00
IUUC-Itr-048070	Ictidomys tridecemlineatus	57.89	9.00e-168	582.00
IUUC-Kpa-049274	Komagataella pastoris	47.58	1.00e-129	455.00
IUUC-Lch-049907	Latimeria chalumnae	55.25	1.00e-154	538.00
IUUC-Lpe-050778	Leersia perrieri	74.27	0.00e+00	726.00
IUUC-Loc-051889	Lepisosteus oculatus	58.09	2.00e-163	567.00
IUUC-Lma-053041	Leptosphaeria maculans	50.70	5.00e-121	427.00
IUUC-Laf-053598	Loxodonta africana	57.98	3.00e-169	587.00
IUUC-Mcc-055660	Macaca mulatta	58.30	5.00e-168	583.00
IUUC-Meu-056197	Macropus eugenii	50.85	5.00e-138	483.00
IUUC-Mor-056949	Magnaporthe oryzae	45.93	1.00e-116	412.00
IUUC-Mpo-057571	Magnaporthe poae	53.92	1.00e-63	236.00
IUUC-Mtr-058530	Medicago truncatula	83.92	0.00e+00	821.00
IUUC-Mla-059133	Melampsora laricipopulina	52.00	9.00e-126	442.00
IUUC-Mga-059252	Meleagris gallopavo	61.81	5.00e-133	466.00
IUUC-Mvi-060522	Microbotryum violaceum	45.25	1.00e-128	452.00
IUUC-Mmr-061117	Microcebus murinus	57.54	1.00e-165	575.00
IUUC-Mdo-062892	Monodelphis domestica	58.51	6.00e-167	579.00
IUUC-Mmu-064108	Mus musculus	58.30	8.00e-163	565.00
IUUC-Mac-064430	Musa acuminata	86.19	0.00e+00	860.00
IUUC-Mpu-065882	Mustela putorius furo	58.09	3.00e-168	583.00
IUUC-Mlu-068123	Myotis lucifugus	58.30	2.00e-168	584.00
IUUC-Nfi-068484	Neosartorya fischeri	45.51	5.00e-117	413.00
IUUC-Ncr-068649	Neurospora crassa	46.92	3.00e-112	398.00
IUUC-Nle-069140	Nomascus leucogenys	58.09	6.00e-168	582.00
IUUC-Opr-070220	Ochotona princeps	54.30	2.00e-142	498.00
IUUC-Ont-072643	Oreochromis niloticus	58.23	5.00e-162	563.00
IUUC-Ocu-074007	Oryctolagus cuniculus	58.72	2.00e-164	571.00
IUUC-Oba-075904	Oryza barthii	81.43	0.00e+00	796.00
IUUC-Obr-076618	Oryza brachyantha	79.70	0.00e+00	793.00
IUUC-Ogl-077425	Oryza glaberrima	80.99	0.00e+00	793.00
IUUC-Ogu-078586	Oryza glumaepatula	80.04	0.00e+00	800.00
IUUC-Oin-079489	Oryza indica	79.05	0.00e+00	764.00
IUUC-Olo-080766	Oryza longistaminata	81.17	0.00e+00	794.00
IUUC-Ome-081905	Oryza meridionalis	81.64	0.00e+00	796.00
IUUC-Oni-083022	Oryza nivara	81.43	0.00e+00	796.00
IUUC-Opu-083615	Oryza punctata	81.64	0.00e+00	796.00
IUUC-Oru-085076	Oryza rufipogon	81.43	0.00e+00	796.00
IUUC-Osa-085516	Oryza sativa	81.43	0.00e+00	796.00
IUUC-Ola-087290	Oryzias latipes	57.59	2.00e-162	564.00
IUUC-Olu-087898	Ostreococcus lucimarinus	57.51	1.00e-164	572.00
IUUC-Oga-088980	Otolemur garnettii	57.87	6.00e-168	582.00
IUUC-Oar-089580	Ovis aries	55.28	8.00e-139	485.00
IUUC-Ptr-090845	Pan troglodytes	57.45	5.00e-165	573.00
IUUC-Pan-092836	Papio anubis	58.30	2.00e-168	584.00
IUUC-Pno-095052	Phaeosphaeria nodorum	49.22	4.00e-124	437.00
IUUC-Ppa-095432	Physcomitrella patens	74.68	0.00e+00	749.00
IUUC-Pfo-096963	Poecilia formosa	52.11	2.00e-137	481.00
IUUC-Pab-097716	Pongo abelii	55.53	1.00e-157	548.00
IUUC-Pop-099224	Populus trichocarpa	89.60	0.00e+00	881.00
IUUC-Pca-100682	Procavia capensis	60.85	7.00e-129	452.00
IUUC-Ppe-101819	Prunus persica	88.47	0.00e+00	878.00
IUUC-Pva-102338	Pteropus vampyrus	53.57	4.00e-116	410.00
IUUC-Pgr-103583	Puccinia graminis	53.22	2.00e-126	445.00
IUUC-Ptt-103737	Puccinia triticina	42.76	8.00e-94	337.00
IUUC-Pte-104150	Pyrenophora teres	49.54	9.00e-122	429.00
IUUC-Pyt-104606	Pyrenophora triticirepentis	49.54	9.00e-122	429.00
IUUC-Rno-105987	Rattus norvegicus	58.30	3.00e-168	584.00
IUUC-Sce-106315	Saccharomyces cerevisiae	55.09	3.00e-135	474.00
IUUC-Sha-107273	Sarcophilus harrisii	57.64	1.00e-168	585.00
IUUC-Sja-107677	Schizosaccharomyces japonicus	45.25	1.00e-119	422.00
IUUC-Spo-108092	Schizosaccharomyces pombe	47.11	8.00e-121	426.00
IUUC-Ssl-108442	Sclerotinia sclerotiorum	46.49	1.00e-118	419.00
IUUC-Smo-108855	Selaginella moellendorffii	68.61	0.00e+00	703.00
IUUC-Sit-110329	Setaria italica	80.13	0.00e+00	795.00
IUUC-Sly-111830	Solanum lycopersicum	87.31	0.00e+00	858.00
IUUC-Stu-112603	Solanum tuberosum	87.31	0.00e+00	858.00
IUUC-Sar-113504	Sorex araneus	46.31	3.00e-38	152.00
IUUC-Sbi-114560	Sorghum bicolor	78.21	0.00e+00	777.00
IUUC-Sre-115133	Sporisorium reilianum	41.30	5.00e-127	447.00
IUUC-Ssc-115903	Sus scrofa	57.87	3.00e-167	580.00
IUUC-Tgu-116798	Taeniopygia guttata	57.45	2.00e-163	568.00
IUUC-Tru-118361	Takifugu rubripes	57.38	3.00e-162	564.00
IUUC-Tsy-118849	Tarsius syrichta	57.91	6.00e-167	579.00
IUUC-Tni-120094	Tetraodon nigroviridis	57.38	7.00e-163	566.00
IUUC-Tre-122051	Trichoderma reesei	47.61	6.00e-112	397.00
IUUC-Tvi-122322	Trichoderma virens	48.42	5.00e-116	410.00
IUUC-Tae-123133	Triticum aestivum	79.87	0.00e+00	789.00
IUUC-Tur-126766	Triticum urartu	70.86	0.00e+00	755.00
IUUC-Tme-127175	Tuber melanosporum	50.75	4.00e-131	460.00
IUUC-Tbe-127779	Tupaia belangeri	60.51	2.00e-156	544.00
IUUC-Ttr-128224	Tursiops truncatus	58.74	2.00e-154	537.00
IUUC-Uma-129537	Ustilago maydis	40.96	6.00e-126	443.00
IUUC-Vda-129927	Verticillium dahliae	46.01	2.00e-111	395.00
IUUC-Vpa-130658	Vicugna pacos	53.67	3.00e-85	308.00
IUUC-Vvi-131659	Vitis vinifera	90.15	0.00e+00	892.00
IUUC-Xtr-132918	Xenopus tropicalis	54.58	1.00e-154	538.00
IUUC-Xma-133700	Xiphophorus maculatus	58.02	3.00e-162	563.00
IUUC-Yli-134478	Yarrowia lipolytica	50.85	2.00e-135	474.00
IUUC-Zma-135835	Zea mays	75.10	0.00e+00	769.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence