iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000396

Ensembl Protein ID

EMT27506

UniProt Accession

M8CUM4; M8CUM4_AEGTA

Genbank Protein ID

EMT27506.1

Protein Name

E3 ubiquitin-protein ligase RLIM

Genbank Nucleotide ID

KD511125

Gene Name

F775_08125

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_08125	EMT27506	EMT27506

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-06	29.4	371	412

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cle     d +++lpC H fh +C+  w       +++ +CP+C+
   Q: 371  CSVCLEQVvaGDLLRSLPCLHRFHVNCIDPW------LRQQGTCPICK 412
           9*****9965444999***************......**********6 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MAMVTYRRPT VVPMETRRRR KGRVKGSVGE KISSTKCRKF CIFINYVMLK LMLFKRGYFY 60
PRVPIYPVDD GHGKKLYPLA DIGIRDGGRC YVGSSKFLLP RGRKALLWNP SYTWWKWWWW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGATGG TGACTTACCG ACGTCCAACC GTGGTGCCGA TGGAGACTCG CCGGCGACGG 60
AAGGGTCGCG TGAAGGGAAG CGTTGGAGAG AAAATATCCT CCACCAAGTG CCGGAAGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0436--Ligase
KW-0472--Membrane
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0016874--F:ligase activity
GO:0008270--F:zinc ion binding

KEGG

ats:F775_08125

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002651	Amborella trichopoda	52.56	2.00e-53	201.00
IUUC-Apl-003834	Anas platyrhynchos	56.60	6.00e-16	78.60
IUUC-Aly-006305	Arabidopsis lyrata	56.08	1.00e-67	248.00
IUUC-Ath-007026	Arabidopsis thaliana	54.58	8.00e-67	246.00
IUUC-Ang-009613	Aspergillus niger	47.54	5.00e-12	65.10
IUUC-Ame-011435	Astyanax mexicanus	52.46	1.00e-13	70.50
IUUC-Bdi-015038	Brachypodium distachyon	63.02	2.00e-84	304.00
IUUC-Bol-015365	Brassica oleracea	54.58	9.00e-63	232.00
IUUC-Bra-017904	Brassica rapa	55.07	9.00e-63	232.00
IUUC-Cho-024867	Choloepus hoffmanni	53.33	4.00e-13	69.30
IUUC-Dre-027553	Danio rerio	50.98	8.00e-14	72.00
IUUC-Dor-030816	Dipodomys ordii	53.33	4.00e-13	69.30
IUUC-Ete-032882	Echinops telfairi	54.72	1.00e-13	70.90
IUUC-Fal-036981	Ficedula albicollis	52.83	3.00e-14	73.20
IUUC-Gmo-039099	Gadus morhua	45.90	1.00e-13	70.50
IUUC-Gga-041114	Gallus gallus	43.21	3.00e-15	76.60
IUUC-Gac-041340	Gasterosteus aculeatus	42.25	4.00e-14	72.00
IUUC-Gma-044260	Glycine max	56.01	1.00e-63	235.00
IUUC-Hvu-047764	Hordeum vulgare	76.43	9.00e-94	335.00
IUUC-Kpa-049389	Komagataella pastoris	33.33	2.00e-10	58.90
IUUC-Lch-050541	Latimeria chalumnae	55.32	2.00e-14	73.60
IUUC-Lpe-051371	Leersia perrieri	64.31	1.00e-77	281.00
IUUC-Loc-051830	Lepisosteus oculatus	48.00	1.00e-12	68.20
IUUC-Meu-056263	Macropus eugenii	47.27	2.00e-13	70.90
IUUC-Mtr-058078	Medicago truncatula	56.09	5.00e-64	236.00
IUUC-Mga-059307	Meleagris gallopavo	56.60	3.00e-15	76.30
IUUC-Mdo-062162	Monodelphis domestica	55.77	5.00e-14	72.40
IUUC-Mac-065081	Musa acuminata	58.01	3.00e-69	253.00
IUUC-Opr-070218	Ochotona princeps	53.33	6.00e-13	68.90
IUUC-Ont-072483	Oreochromis niloticus	45.76	9.00e-14	72.00
IUUC-Oba-075903	Oryza barthii	59.02	1.00e-25	108.00
IUUC-Obr-076184	Oryza brachyantha	59.52	5.00e-73	267.00
IUUC-Ogl-076965	Oryza glaberrima	64.08	7.00e-83	299.00
IUUC-Ogu-078414	Oryza glumaepatula	55.34	2.00e-66	244.00
IUUC-Oin-079430	Oryza indica	64.08	7.00e-83	299.00
IUUC-Olo-080739	Oryza longistaminata	63.11	7.00e-83	299.00
IUUC-Ome-081538	Oryza meridionalis	62.82	4.00e-83	300.00
IUUC-Oni-082633	Oryza nivara	63.11	6.00e-83	300.00
IUUC-Opu-084125	Oryza punctata	61.98	4.00e-78	283.00
IUUC-Oru-085061	Oryza rufipogon	55.34	2.00e-66	244.00
IUUC-Osa-086209	Oryza sativa	64.08	7.00e-83	299.00
IUUC-Ola-087358	Oryzias latipes	45.61	2.00e-12	67.00
IUUC-Psi-093735	Pelodiscus sinensis	54.72	9.00e-15	74.70
IUUC-Pma-094545	Petromyzon marinus	54.35	3.00e-13	65.50
IUUC-Ppa-095613	Physcomitrella patens	44.00	2.00e-44	171.00
IUUC-Pfo-096917	Poecilia formosa	45.76	5.00e-14	72.40
IUUC-Pop-099435	Populus trichocarpa	55.59	1.00e-67	248.00
IUUC-Ppe-101792	Prunus persica	56.13	2.00e-67	248.00
IUUC-Sha-106681	Sarcophilus harrisii	40.51	2.00e-14	73.60
IUUC-Ssl-108601	Sclerotinia sclerotiorum	49.02	3.00e-12	65.90
IUUC-Smo-109389	Selaginella moellendorffii	43.81	5.00e-48	183.00
IUUC-Sit-110587	Setaria italica	75.68	5.00e-21	92.00
IUUC-Sly-111915	Solanum lycopersicum	49.23	6.00e-62	229.00
IUUC-Stu-112568	Solanum tuberosum	52.61	4.00e-54	205.00
IUUC-Sbi-113958	Sorghum bicolor	65.91	8.00e-78	282.00
IUUC-Tgu-117477	Taeniopygia guttata	52.83	6.00e-14	72.00
IUUC-Tru-118502	Takifugu rubripes	45.61	2.00e-12	67.40
IUUC-Tsy-119210	Tarsius syrichta	53.33	6.00e-13	68.90
IUUC-Tni-120344	Tetraodon nigroviridis	44.93	3.00e-14	72.40
IUUC-Tca-121397	Theobroma cacao	55.26	6.00e-70	256.00
IUUC-Tae-125370	Triticum aestivum	78.03	8.00e-99	352.00
IUUC-Tur-125977	Triticum urartu	88.05	6.00e-135	472.00
IUUC-Vvi-131326	Vitis vinifera	55.63	7.00e-63	233.00
IUUC-Xtr-132280	Xenopus tropicalis	47.06	2.00e-12	67.40
IUUC-Xma-134192	Xiphophorus maculatus	45.76	7.00e-14	72.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence