iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-115895

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU928029

Gene Name

TRIM65

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000017195.2	ENSSSCT00000018720.2	ENSSSCP00000018218.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.60e-06	28.1	12	51
E3 activity/RING/U-box	8.10e-06	26.1	9	56

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl  ++  p++l CgH f++ C+q w       + e  CP Cr
   Q: 12   CAICLGLYQV-PVTLLCGHNFCRGCIQDW-----WGRHEKACPECR 51
           ********88.999************999.....799999*****8 PP

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplte 52
            + C+I l l + Pv+l +G+ + r +I+ w  + +k cP +r+p+  
   Q: 9    RLTCAICLGLYQVPVTLLCGHNFCRGCIQDWWGRHEKACPECREPFPA 56
           678*****************************************9854 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MAAQRLEDRL TCAICLGLYQ VPVTLLCGHN FCRGCIQDWW GRHEKACPEC REPFPAGAEP 60
RRNVALSGVV EELRARPAPG PGPGPDPGPG PDSDSGARCP RHGRPLELFC RTEGLCVCSA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCCCGGCGC TGGGCCCGCG CGCCGCCGCC ATGGCCGCGC AGCGGCTGGA GGACAGGCTG 60
ACCTGCGCCA TCTGCCTGGG GCTCTACCAG GTACCCGTGA CGCTGCTCTG CGGCCACAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR006574--PRY
IPR003877--SPRY_dom
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00622--SPRY
PF00643--zf-B_box
PF13445--zf-RING_UBOX

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00589--PRY
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0008270--F:zinc ion binding
GO:0010508--P:positive regulation of autophagy

KEGG

ssc:100523461

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002422	Ailuropoda melanoleuca	77.36	3.00e-159	554.00
IUUC-Apl-003984	Anas platyrhynchos	39.32	8.00e-15	72.00
IUUC-Ang-009514	Aspergillus niger	40.00	3.00e-10	59.70
IUUC-Ame-011110	Astyanax mexicanus	31.48	2.00e-55	209.00
IUUC-Bta-012830	Bos taurus	78.97	0.00e+00	687.00
IUUC-Cja-019398	Callithrix jacchus	77.60	5.00e-105	373.00
IUUC-Cfa-021033	Canis familiaris	78.07	6.00e-164	570.00
IUUC-Cpo-021359	Cavia porcellus	64.75	9.00e-170	589.00
IUUC-Cre-022788	Chlamydomonas reinhardtii	35.71	1.00e-08	53.50
IUUC-Csa-023706	Chlorocebus sabaeus	72.87	0.00e+00	660.00
IUUC-Dre-027965	Danio rerio	30.04	3.00e-57	215.00
IUUC-Dno-029551	Dasypus novemcinctus	57.51	3.00e-151	528.00
IUUC-Dor-030830	Dipodomys ordii	67.59	2.00e-154	538.00
IUUC-Eca-033217	Equus caballus	76.58	2.00e-141	494.00
IUUC-Fca-036403	Felis catus	75.95	0.00e+00	702.00
IUUC-Fal-037118	Ficedula albicollis	39.28	2.00e-89	322.00
IUUC-Gmo-039107	Gadus morhua	30.92	5.00e-53	201.00
IUUC-Gac-042501	Gasterosteus aculeatus	31.36	7.00e-54	204.00
IUUC-Ggo-044481	Gorilla gorilla	69.42	0.00e+00	635.00
IUUC-Hsa-046113	Homo sapiens	74.37	0.00e+00	675.00
IUUC-Itr-049000	Ictidomys tridecemlineatus	63.88	5.00e-150	524.00
IUUC-Kpa-049392	Komagataella pastoris	37.88	5.00e-09	54.70
IUUC-Loc-052279	Lepisosteus oculatus	30.33	1.00e-58	220.00
IUUC-Laf-054143	Loxodonta africana	70.36	6.00e-177	613.00
IUUC-Mcc-055216	Macaca mulatta	71.71	0.00e+00	642.00
IUUC-Meu-056384	Macropus eugenii	63.41	3.00e-71	262.00
IUUC-Mmr-061758	Microcebus murinus	76.42	4.00e-173	600.00
IUUC-Mdo-062422	Monodelphis domestica	44.94	7.00e-73	267.00
IUUC-Mmu-063753	Mus musculus	62.29	5.00e-158	550.00
IUUC-Mpu-065880	Mustela putorius furo	74.42	1.00e-180	625.00
IUUC-Mlu-067629	Myotis lucifugus	70.62	8.00e-93	333.00
IUUC-Nle-069604	Nomascus leucogenys	72.41	5.00e-130	456.00
IUUC-Opr-070884	Ochotona princeps	64.01	1.00e-164	572.00
IUUC-Ont-072089	Oreochromis niloticus	31.41	2.00e-47	182.00
IUUC-Oan-073697	Ornithorhynchus anatinus	56.82	5.00e-52	196.00
IUUC-Ocu-073936	Oryctolagus cuniculus	63.50	1.00e-162	566.00
IUUC-Ola-087079	Oryzias latipes	28.07	3.00e-48	185.00
IUUC-Oga-087916	Otolemur garnettii	71.70	1.00e-146	512.00
IUUC-Oar-090188	Ovis aries	79.20	0.00e+00	630.00
IUUC-Ptr-091364	Pan troglodytes	75.43	2.00e-133	468.00
IUUC-Pan-092240	Papio anubis	72.09	0.00e+00	679.00
IUUC-Psi-093439	Pelodiscus sinensis	45.49	2.00e-52	197.00
IUUC-Pfo-097460	Poecilia formosa	30.21	2.00e-55	209.00
IUUC-Pab-098661	Pongo abelii	66.67	4.00e-162	563.00
IUUC-Pva-102208	Pteropus vampyrus	76.67	0.00e+00	681.00
IUUC-Rno-105456	Rattus norvegicus	61.86	1.00e-153	535.00
IUUC-Sha-107040	Sarcophilus harrisii	51.05	1.00e-126	446.00
IUUC-Sar-113700	Sorex araneus	72.13	2.00e-74	273.00
IUUC-Tru-118244	Takifugu rubripes	31.12	3.00e-52	199.00
IUUC-Tni-120643	Tetraodon nigroviridis	29.64	2.00e-51	196.00
IUUC-Tbe-127865	Tupaia belangeri	64.85	3.00e-81	294.00
IUUC-Ttr-128578	Tursiops truncatus	82.03	0.00e+00	700.00
IUUC-Xtr-131897	Xenopus tropicalis	34.04	5.00e-81	295.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence