iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-098948

Ensembl Protein ID

POPTR_0004s00670.1

UniProt Accession

B9N8F2; B9N8F2_POPTR

Genbank Protein ID

ERP61658.1

Protein Name

Bromo-adjacent homology (BAH) domain-containing family protein

Genbank Nucleotide ID

CM000340

Gene Name

POPTR_0004s00670g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0004s00670	POPTR_0004s00670.1	POPTR_0004s00670.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.70e-08	35.6	149	197

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           +C  C+ +++ ++ +v+Ce C++w+HpaC+ +++ee ++ ++ + C++C s
   Q: 149  YC-KCEMPYNPDDLMVQCEGCKDWYHPACVDMTIEEAKKLDH-FVCSECAS 197
           78.7*****************************888888887.******86 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAKTRPGGLI SKPKTGKRDL DSYTIRGTTK VVRVGDCVMM RPSDTGRPSY VARIEGMEAD 60
SRNNVKVRVR WYYRPEESLG GRRQFHGAKE LFLSDHYDVQ SAHTIEGKCI VHSFKNYTKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGTTGTCTT CTCTCTCCCT TCAATGTCAA GAAGCTAGGG TTTCTCTCCC TCCAAAATCC 60
CATTATCTGT TTCTCCCAAA ATCCCACTCC ATCACTTTCA AGTAGAGGAT ACACTTAAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001025--BAH_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51038--BAH
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01426--BAH
PF00628--PHD

SMART

SM00439--BAH
SM00249--PHD

Gene Ontology

GO:0000785--C:chromatin
GO:0005677--C:chromatin silencing complex
GO:0003682--F:chromatin binding
GO:0000976--F:transcription regulatory region sequence-specific DNA binding
GO:0008270--F:zinc ion binding
GO:0006342--P:chromatin silencing
GO:0031507--P:heterochromatin assembly

KEGG

pop:POPTR_0004s00670g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005717	Arabidopsis lyrata	84.40	4.00e-112	396.00
IUUC-Ath-007631	Arabidopsis thaliana	84.86	7.00e-113	399.00
IUUC-Ame-010924	Astyanax mexicanus	43.33	2.00e-10	62.40
IUUC-Bdi-014153	Brachypodium distachyon	72.69	2.00e-95	340.00
IUUC-Bol-016238	Brassica oleracea	84.00	2.00e-114	404.00
IUUC-Bra-017570	Brassica rapa	84.00	7.00e-115	405.00
IUUC-Dre-028054	Danio rerio	41.94	2.00e-10	63.20
IUUC-Dno-029508	Dasypus novemcinctus	40.32	4.00e-10	61.20
IUUC-Fso-038446	Fusarium solani	38.89	3.00e-06	45.80
IUUC-Gma-043039	Glycine max	82.22	8.00e-111	392.00
IUUC-Lpe-051400	Leersia perrieri	73.61	2.00e-95	341.00
IUUC-Loc-052694	Lepisosteus oculatus	41.94	6.00e-10	61.20
IUUC-Lma-053190	Leptosphaeria maculans	33.33	7.00e-05	43.50
IUUC-Meu-056467	Macropus eugenii	35.85	2.00e-03	38.50
IUUC-Mpo-057588	Magnaporthe poae	37.04	3.00e-05	43.10
IUUC-Mtr-057710	Medicago truncatula	81.78	1.00e-104	371.00
IUUC-Oba-075188	Oryza barthii	73.40	8.00e-93	332.00
IUUC-Obr-076844	Oryza brachyantha	71.76	5.00e-96	342.00
IUUC-Ogl-077260	Oryza glaberrima	71.30	2.00e-95	340.00
IUUC-Opu-083591	Oryza punctata	74.07	1.00e-99	354.00
IUUC-Pan-092346	Papio anubis	40.32	4.00e-11	63.20
IUUC-Ptt-104009	Puccinia triticina	33.96	2.00e-05	43.10
IUUC-Smo-109649	Selaginella moellendorffii	65.00	3.00e-87	313.00
IUUC-Sit-110411	Setaria italica	73.61	2.00e-99	353.00
IUUC-Stu-112123	Solanum tuberosum	78.67	3.00e-103	367.00
IUUC-Sbi-114186	Sorghum bicolor	72.22	1.00e-97	348.00
IUUC-Sre-115140	Sporisorium reilianum	48.98	5.00e-08	53.10
IUUC-Tae-122704	Triticum aestivum	75.93	9.00e-95	338.00
IUUC-Tur-126461	Triticum urartu	62.96	2.00e-74	270.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence