iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126162

Ensembl Protein ID

TRIUR3_17652-P1

UniProt Accession

M7YYQ9; M7YYQ9_TRIUA

Genbank Protein ID

EMS45200.1

Protein Name

Zinc finger protein GIS2

Genbank Nucleotide ID

KD289839

Gene Name

TRIUR3_17652

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_17652	TRIUR3_17652-T1	TRIUR3_17652-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.00e-05	26.2	12	53

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 20   vlpsGitydrssIekwlasggk...tcPvtrqplteedlvPn 58
           ++p+G++y rs++ekwla++gk   tcP +++ +++++++  
   Q: 12   CIPCGHVYGRSCLEKWLAQCGKksaTCPQCGKMFRQKNIINL 53
           789**************99999999*********99998865 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MRRFVRYRLT RCIPCGHVYG RSCLEKWLAQ CGKKSATCPQ CGKMFRQKNI INLYAPEIVV 60
PNNDLEKQVL SLRDKNEFLE NQQQKLIEEI KEYKRQILHQ QRLINESSSK RQNEFVLDGA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCGGCGGT TCGTGCGTTA CCGGCTCACC CGGTGAGCTC TACCAGCTCG GGTGATGAGG 60
ATGGGGAGGA GGCGGGGGAT GGGGATGATG AGGACGCGGA GGGGCCGCTC CTCCCCAGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR017986--WD40_repeat_dom
IPR001878--Znf_CCHC
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50158--ZF_CCHC

Pfam

PF00098--zf-CCHC

SMART

SM00343--ZnF_C2HC

Gene Ontology

GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000491	Aegilops tauschii	89.29	0.00e+00	803.00
IUUC-Aml-001188	Ailuropoda melanoleuca	25.09	2.00e-17	83.60
IUUC-Atr-003034	Amborella trichopoda	47.33	2.00e-60	224.00
IUUC-Aca-004619	Anolis carolinensis	26.04	1.00e-21	97.10
IUUC-Aly-006391	Arabidopsis lyrata	36.02	7.00e-73	267.00
IUUC-Ath-007300	Arabidopsis thaliana	34.61	2.00e-70	259.00
IUUC-Ame-010890	Astyanax mexicanus	27.04	2.00e-24	106.00
IUUC-Bta-013051	Bos taurus	25.38	7.00e-18	85.10
IUUC-Bol-015271	Brassica oleracea	35.04	3.00e-70	258.00
IUUC-Bra-017931	Brassica rapa	34.83	2.00e-69	256.00
IUUC-Cfa-021010	Canis familiaris	24.64	3.00e-17	83.20
IUUC-Cpo-022308	Cavia porcellus	22.83	1.00e-17	84.00
IUUC-Csa-023501	Chlorocebus sabaeus	26.69	2.00e-17	84.00
IUUC-Csv-025819	Ciona savignyi	28.67	2.00e-08	51.60
IUUC-Dre-028354	Danio rerio	23.28	2.00e-21	96.70
IUUC-Dno-029400	Dasypus novemcinctus	25.45	5.00e-17	82.00
IUUC-Eca-034320	Equus caballus	24.03	1.00e-19	90.90
IUUC-Fca-035732	Felis catus	23.06	1.00e-19	90.90
IUUC-Fal-036648	Ficedula albicollis	24.84	1.00e-16	80.90
IUUC-Gmo-038609	Gadus morhua	28.17	2.00e-14	72.80
IUUC-Gac-042318	Gasterosteus aculeatus	27.11	2.00e-14	72.80
IUUC-Gma-043184	Glycine max	34.12	3.00e-60	225.00
IUUC-Ggo-044464	Gorilla gorilla	25.36	2.00e-17	83.60
IUUC-Hsa-045991	Homo sapiens	25.00	8.00e-17	81.60
IUUC-Hvu-047705	Hordeum vulgare	87.08	0.00e+00	790.00
IUUC-Itr-047977	Ictidomys tridecemlineatus	24.63	2.00e-17	83.60
IUUC-Lch-050112	Latimeria chalumnae	25.80	6.00e-19	88.20
IUUC-Lpe-051666	Leersia perrieri	60.53	4.00e-134	470.00
IUUC-Laf-054559	Loxodonta africana	26.49	3.00e-18	85.90
IUUC-Mcc-055093	Macaca mulatta	26.33	4.00e-17	82.40
IUUC-Mtr-058533	Medicago truncatula	37.64	8.00e-77	280.00
IUUC-Mga-059498	Meleagris gallopavo	23.89	1.00e-18	87.40
IUUC-Mac-064582	Musa acuminata	52.10	9.00e-117	413.00
IUUC-Mpu-066087	Mustela putorius furo	23.59	2.00e-18	87.00
IUUC-Mlu-068147	Myotis lucifugus	22.83	2.00e-16	80.50
IUUC-Nle-069503	Nomascus leucogenys	24.73	6.00e-15	75.10
IUUC-Oan-073702	Ornithorhynchus anatinus	24.26	2.00e-20	93.60
IUUC-Ocu-074886	Oryctolagus cuniculus	28.12	7.00e-18	85.10
IUUC-Oba-075729	Oryza barthii	69.48	0.00e+00	639.00
IUUC-Obr-076562	Oryza brachyantha	60.68	1.00e-150	525.00
IUUC-Ogl-077615	Oryza glaberrima	69.48	0.00e+00	639.00
IUUC-Ogu-078921	Oryza glumaepatula	69.91	0.00e+00	645.00
IUUC-Oin-079250	Oryza indica	62.38	9.00e-152	529.00
IUUC-Olo-080758	Oryza longistaminata	76.26	0.00e+00	653.00
IUUC-Ome-081707	Oryza meridionalis	62.62	2.00e-152	531.00
IUUC-Oni-083006	Oryza nivara	70.13	0.00e+00	645.00
IUUC-Opu-083650	Oryza punctata	70.07	0.00e+00	632.00
IUUC-Oru-084924	Oryza rufipogon	69.70	0.00e+00	636.00
IUUC-Osa-085820	Oryza sativa	69.48	0.00e+00	640.00
IUUC-Ola-087229	Oryzias latipes	27.97	3.00e-14	72.00
IUUC-Oga-088243	Otolemur garnettii	24.46	1.00e-19	91.30
IUUC-Oar-089461	Ovis aries	24.95	2.00e-18	86.70
IUUC-Ptr-090527	Pan troglodytes	25.00	2.00e-15	76.60
IUUC-Pan-092431	Papio anubis	25.62	8.00e-17	81.60
IUUC-Psi-093156	Pelodiscus sinensis	26.71	1.00e-20	94.00
IUUC-Ppa-095305	Physcomitrella patens	36.71	4.00e-44	172.00
IUUC-Pfo-097065	Poecilia formosa	25.37	2.00e-22	100.00
IUUC-Pab-098272	Pongo abelii	25.36	9.00e-18	84.70
IUUC-Pop-099827	Populus trichocarpa	38.91	2.00e-81	296.00
IUUC-Ppe-102103	Prunus persica	36.07	4.00e-83	301.00
IUUC-Pva-103133	Pteropus vampyrus	24.29	6.00e-11	62.00
IUUC-Sit-109781	Setaria italica	68.33	0.00e+00	635.00
IUUC-Sly-111779	Solanum lycopersicum	36.62	6.00e-71	261.00
IUUC-Sbi-114107	Sorghum bicolor	57.43	4.00e-142	497.00
IUUC-Ssc-115850	Sus scrofa	25.27	2.00e-20	93.60
IUUC-Tgu-117295	Taeniopygia guttata	24.63	1.00e-21	96.70
IUUC-Tru-117539	Takifugu rubripes	26.26	5.00e-23	101.00
IUUC-Tsy-118805	Tarsius syrichta	41.51	9.00e-06	44.70
IUUC-Tni-120274	Tetraodon nigroviridis	25.80	7.00e-25	107.00
IUUC-Tca-121162	Theobroma cacao	35.21	8.00e-68	250.00
IUUC-Tae-124822	Triticum aestivum	89.31	0.00e+00	807.00
IUUC-Vpa-130385	Vicugna pacos	22.98	2.00e-18	87.00
IUUC-Vvi-131464	Vitis vinifera	38.96	5.00e-78	284.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence