iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fal-037078

Ensembl Protein ID

ENSFALP00000004074.1

UniProt Accession

U3JMS0; U3JMS0_FICAL

Genbank Protein ID

ENSFALP00000004074

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTO01011403

Gene Name

KDM5A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFALG00000003907.1	ENSFALT00000004093.1	ENSFALP00000004074.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	5.20e-15	55.1	294	341

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           vCl+Cg+g +++ +l+ C+ C++ +H  Cl ++  +++p+ + w CpkC +
   Q: 294  VCLFCGRGNNED-KLLLCDGCDDSYHTFCLIPP-LPDVPKGD-WRCPKCVA 341
           8*********88.6*******************.*******7.******75 PP

Organism

Ficedula albicollis

Protein Sequence
(Fasta)

MAGGGGSRYA AEFVPPPECP VFEPSWEEFS DPLGFIGRIR GLAEKTGICK IRPPKDWQPP 60
FACEVQSFRF TPRIQRLNEL EAMTRVKLDF LDQLAKFWEL QGSNLKIPVV ERKILDLYGL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGGGGGGGG GGGGGGGGGG GGGGGGGGGG GGGGGGGGGG GGGGGGGGGG GGGGGGGGGG 60
GGGGGGGGGG GGCCGGCCCG GCAGCGCCGC CGGGGGATGC GCCTCAGCGC CCGGCCCAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR003349--JmjN
IPR013637--Lys_sp_deMease-like_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51011--ARID
PS51184--JMJC
PS51183--JMJN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01388--ARID
PF02373--JmjC
PF02375--JmjN
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2

SMART

SM00501--BRIGHT
SM00558--JmjC
SM00545--JmjN
SM00249--PHD

Gene Ontology

GO:0019907--C:cyclin-dependent protein kinase activating kinase holoenzyme complex
GO:0032993--C:protein-DNA complex
GO:0031490--F:chromatin DNA binding
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0003713--F:transcription coactivator activity
GO:0008270--F:zinc ion binding
GO:0032922--P:circadian regulation of gene expression
GO:0034720--P:histone H3-K4 demethylation
GO:1901726--P:negative regulation of histone deacetylase activity
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0045893--P:positive regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002061	Ailuropoda melanoleuca	91.59	0.00e+00	2457.00
IUUC-Atr-002595	Amborella trichopoda	30.99	1.00e-122	435.00
IUUC-Apl-004141	Anas platyrhynchos	98.37	0.00e+00	2602.00
IUUC-Aca-004952	Anolis carolinensis	92.70	0.00e+00	2514.00
IUUC-Acl-008162	Aspergillus clavatus	30.58	2.00e-118	420.00
IUUC-Afl-008625	Aspergillus flavus	29.64	1.00e-114	408.00
IUUC-Afu-008796	Aspergillus fumigatus	30.33	4.00e-116	413.00
IUUC-Ani-009139	Aspergillus nidulans	29.17	1.00e-110	395.00
IUUC-Aor-010155	Aspergillus oryzae	29.64	1.00e-114	408.00
IUUC-Ate-010453	Aspergillus terreus	30.06	1.00e-111	398.00
IUUC-Ame-011323	Astyanax mexicanus	74.13	0.00e+00	2080.00
IUUC-Bgr-012241	Blumeria graminis	31.52	4.00e-104	373.00
IUUC-Bta-012902	Bos taurus	91.02	0.00e+00	2477.00
IUUC-Bdi-014050	Brachypodium distachyon	28.63	4.00e-118	420.00
IUUC-Cja-018988	Callithrix jacchus	91.63	0.00e+00	2288.00
IUUC-Cfa-020212	Canis familiaris	90.52	0.00e+00	2420.00
IUUC-Cpo-022221	Cavia porcellus	92.45	0.00e+00	1631.00
IUUC-Csa-023575	Chlorocebus sabaeus	91.66	0.00e+00	2476.00
IUUC-Cho-024280	Choloepus hoffmanni	86.32	0.00e+00	2236.00
IUUC-Cin-025321	Ciona intestinalis	49.70	0.00e+00	1095.00
IUUC-Csv-026185	Ciona savignyi	47.30	0.00e+00	1165.00
IUUC-Dre-027909	Danio rerio	76.97	0.00e+00	1650.00
IUUC-Dno-029473	Dasypus novemcinctus	91.29	0.00e+00	2332.00
IUUC-Dor-030226	Dipodomys ordii	53.31	0.00e+00	1028.00
IUUC-Dse-031479	Dothistroma septosporum	27.58	6.00e-112	399.00
IUUC-Dme-032021	Drosophila melanogaster	45.98	0.00e+00	1100.00
IUUC-Eca-034265	Equus caballus	90.05	0.00e+00	2457.00
IUUC-Eeu-034692	Erinaceus europaeus	58.26	0.00e+00	1108.00
IUUC-Fca-035476	Felis catus	91.65	0.00e+00	2454.00
IUUC-Fso-038127	Fusarium solani	28.94	2.00e-110	394.00
IUUC-Gmo-039140	Gadus morhua	54.20	0.00e+00	1361.00
IUUC-Gga-040466	Gallus gallus	97.00	0.00e+00	2688.00
IUUC-Gac-042566	Gasterosteus aculeatus	75.27	0.00e+00	2025.00
IUUC-Ggo-044524	Gorilla gorilla	91.61	0.00e+00	2182.00
IUUC-Hsa-045821	Homo sapiens	91.73	0.00e+00	2472.00
IUUC-Itr-048348	Ictidomys tridecemlineatus	57.20	0.00e+00	1434.00
IUUC-Kpa-049245	Komagataella pastoris	21.42	7.00e-36	146.00
IUUC-Lch-050630	Latimeria chalumnae	75.39	0.00e+00	2007.00
IUUC-Loc-051963	Lepisosteus oculatus	76.00	0.00e+00	1980.00
IUUC-Laf-053918	Loxodonta africana	84.41	0.00e+00	2196.00
IUUC-Mcc-055672	Macaca mulatta	91.59	0.00e+00	2470.00
IUUC-Meu-056643	Macropus eugenii	55.93	0.00e+00	1352.00
IUUC-Mor-057198	Magnaporthe oryzae	30.47	8.00e-117	415.00
IUUC-Mtr-058113	Medicago truncatula	31.41	3.00e-92	333.00
IUUC-Mga-059192	Meleagris gallopavo	86.47	0.00e+00	2204.00
IUUC-Mmr-060968	Microcebus murinus	91.51	0.00e+00	2470.00
IUUC-Mdo-062945	Monodelphis domestica	92.58	0.00e+00	2489.00
IUUC-Mmu-063614	Mus musculus	90.52	0.00e+00	2455.00
IUUC-Mpu-066349	Mustela putorius furo	91.66	0.00e+00	2454.00
IUUC-Mlu-067363	Myotis lucifugus	91.09	0.00e+00	2487.00
IUUC-Nle-070142	Nomascus leucogenys	91.59	0.00e+00	2483.00
IUUC-Ont-072471	Oreochromis niloticus	78.58	0.00e+00	1801.00
IUUC-Oan-072797	Ornithorhynchus anatinus	78.81	0.00e+00	2004.00
IUUC-Ocu-074164	Oryctolagus cuniculus	91.51	0.00e+00	2491.00
IUUC-Oba-075388	Oryza barthii	27.70	5.00e-81	296.00
IUUC-Obr-076296	Oryza brachyantha	31.05	3.00e-95	344.00
IUUC-Ogu-079040	Oryza glumaepatula	27.96	2.00e-81	298.00
IUUC-Ome-081764	Oryza meridionalis	29.78	1.00e-99	358.00
IUUC-Oni-083012	Oryza nivara	27.87	1.00e-80	295.00
IUUC-Oru-084630	Oryza rufipogon	27.58	4.00e-80	293.00
IUUC-Ola-087076	Oryzias latipes	74.66	0.00e+00	1999.00
IUUC-Oga-088350	Otolemur garnettii	89.09	0.00e+00	2386.00
IUUC-Oar-090045	Ovis aries	91.22	0.00e+00	2476.00
IUUC-Ptr-091199	Pan troglodytes	92.08	0.00e+00	2474.00
IUUC-Pan-092094	Papio anubis	88.89	0.00e+00	2412.00
IUUC-Psi-093550	Pelodiscus sinensis	94.69	0.00e+00	2505.00
IUUC-Pma-094137	Petromyzon marinus	56.44	0.00e+00	1238.00
IUUC-Pno-094879	Phaeosphaeria nodorum	29.41	5.00e-118	419.00
IUUC-Pfo-097266	Poecilia formosa	75.32	0.00e+00	2030.00
IUUC-Pab-098576	Pongo abelii	91.80	0.00e+00	2471.00
IUUC-Pca-100123	Procavia capensis	88.95	0.00e+00	1436.00
IUUC-Pva-103109	Pteropus vampyrus	85.15	0.00e+00	2276.00
IUUC-Pgr-103434	Puccinia graminis	35.15	2.00e-27	116.00
IUUC-Pte-104195	Pyrenophora teres	29.63	7.00e-123	435.00
IUUC-Pyt-104566	Pyrenophora triticirepentis	29.82	2.00e-124	441.00
IUUC-Rno-105664	Rattus norvegicus	90.81	0.00e+00	2452.00
IUUC-Sha-107506	Sarcophilus harrisii	91.92	0.00e+00	2134.00
IUUC-Sja-107970	Schizosaccharomyces japonicus	20.82	2.00e-40	161.00
IUUC-Spo-108283	Schizosaccharomyces pombe	23.14	3.00e-54	207.00
IUUC-Ssl-108489	Sclerotinia sclerotiorum	29.31	8.00e-118	419.00
IUUC-Smo-108843	Selaginella moellendorffii	52.08	1.00e-10	61.60
IUUC-Sit-110534	Setaria italica	29.13	2.00e-115	411.00
IUUC-Sar-113052	Sorex araneus	90.09	0.00e+00	2432.00
IUUC-Sre-115161	Sporisorium reilianum	29.71	4.00e-129	456.00
IUUC-Ssc-116354	Sus scrofa	57.20	0.00e+00	1422.00
IUUC-Tgu-116613	Taeniopygia guttata	98.64	0.00e+00	2635.00
IUUC-Tru-118604	Takifugu rubripes	75.38	0.00e+00	2066.00
IUUC-Tni-120779	Tetraodon nigroviridis	74.93	0.00e+00	2043.00
IUUC-Tre-122213	Trichoderma reesei	29.71	3.00e-116	413.00
IUUC-Tvi-122263	Trichoderma virens	29.43	2.00e-112	400.00
IUUC-Tme-127087	Tuber melanosporum	30.81	2.00e-128	454.00
IUUC-Tbe-128040	Tupaia belangeri	67.38	0.00e+00	769.00
IUUC-Ttr-129242	Tursiops truncatus	89.94	0.00e+00	2396.00
IUUC-Uma-129590	Ustilago maydis	29.72	1.00e-130	462.00
IUUC-Vda-129733	Verticillium dahliae	28.77	1.00e-101	365.00
IUUC-Vpa-130429	Vicugna pacos	85.19	0.00e+00	1391.00
IUUC-Xtr-131762	Xenopus tropicalis	75.81	0.00e+00	1993.00
IUUC-Xma-133693	Xiphophorus maculatus	75.43	0.00e+00	2050.00
IUUC-Zma-135829	Zea mays	34.40	1.00e-113	405.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence