iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095213

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

SNF2 family DNA-dependent ATPase

Genbank Nucleotide ID

DS544922

Gene Name

CHR1512; PHYPADRAFT_120666

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S33_329V6	PP1S33_329V6.1	PP1S33_329V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.50e-08	35.5	75	119

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C +C+ gg+    l++C+ C+ +fH +Cl ++  + +p+ + w CpkC 
   Q: 75   DFCSICHLGGD----LLCCDTCTAVFHLGCLDPP-MKVVPRGK-WSCPKCA 119
           79*********....*******************.99999997.******7 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MTKEDFTDEP VNEGGDGDEE YSLVTERLRQ RTNRKPVYVE EEEGMEEDEW EEEADEGEEE 60
EDEEKEVLKM EQSEDFCSIC HLGGDLLCCD TCTAVFHLGC LDPPMKVVPR GKWSCPKCAD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACTAAAG AGGACTTTAC GGACGAGCCT GTGAACGAAG GCGGCGATGG AGATGAGGTT 60
TGTGAGCTTG TCCTGAATTA GCTCTTGACA TTGGTTTTTG CTTACTATTG ATGTCATAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0005524--F:ATP binding
GO:0008270--F:zinc ion binding

KEGG

ppp:PHYPADRAFT_120666

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001361	Ailuropoda melanoleuca	42.04	0.00e+00	719.00
IUUC-Apl-004175	Anas platyrhynchos	42.28	0.00e+00	720.00
IUUC-Aca-004560	Anolis carolinensis	41.64	0.00e+00	702.00
IUUC-Ame-011098	Astyanax mexicanus	41.90	0.00e+00	701.00
IUUC-Bta-013220	Bos taurus	42.23	0.00e+00	720.00
IUUC-Cel-018108	Caenorhabditis elegans	40.22	0.00e+00	725.00
IUUC-Cja-019018	Callithrix jacchus	41.79	0.00e+00	706.00
IUUC-Cfa-020422	Canis familiaris	42.23	0.00e+00	721.00
IUUC-Cpo-021704	Cavia porcellus	42.15	0.00e+00	721.00
IUUC-Csa-023625	Chlorocebus sabaeus	42.19	0.00e+00	722.00
IUUC-Cho-024361	Choloepus hoffmanni	43.71	8.00e-161	561.00
IUUC-Csv-025847	Ciona savignyi	41.27	0.00e+00	714.00
IUUC-Dre-028226	Danio rerio	41.15	0.00e+00	700.00
IUUC-Dno-029656	Dasypus novemcinctus	42.23	0.00e+00	723.00
IUUC-Dor-030167	Dipodomys ordii	41.51	0.00e+00	700.00
IUUC-Dme-031719	Drosophila melanogaster	44.99	0.00e+00	644.00
IUUC-Eca-034112	Equus caballus	42.23	0.00e+00	721.00
IUUC-Fca-036056	Felis catus	42.23	0.00e+00	721.00
IUUC-Fal-037312	Ficedula albicollis	42.24	0.00e+00	716.00
IUUC-Gmo-038957	Gadus morhua	42.21	5.00e-179	621.00
IUUC-Gga-040216	Gallus gallus	42.24	0.00e+00	721.00
IUUC-Gac-042478	Gasterosteus aculeatus	41.86	0.00e+00	723.00
IUUC-Ggo-045538	Gorilla gorilla	41.61	0.00e+00	702.00
IUUC-Hsa-045908	Homo sapiens	42.01	0.00e+00	721.00
IUUC-Itr-048002	Ictidomys tridecemlineatus	42.23	0.00e+00	720.00
IUUC-Lch-049948	Latimeria chalumnae	38.67	0.00e+00	640.00
IUUC-Loc-052144	Lepisosteus oculatus	42.10	0.00e+00	708.00
IUUC-Laf-053870	Loxodonta africana	41.89	0.00e+00	709.00
IUUC-Mcc-055773	Macaca mulatta	42.01	0.00e+00	721.00
IUUC-Meu-056292	Macropus eugenii	36.16	1.00e-75	278.00
IUUC-Mga-059633	Meleagris gallopavo	42.28	0.00e+00	721.00
IUUC-Mmr-060886	Microcebus murinus	42.04	0.00e+00	720.00
IUUC-Mdo-062872	Monodelphis domestica	42.17	0.00e+00	717.00
IUUC-Mmu-063672	Mus musculus	42.23	0.00e+00	720.00
IUUC-Mpu-066692	Mustela putorius furo	42.23	0.00e+00	721.00
IUUC-Mlu-067785	Myotis lucifugus	42.27	0.00e+00	722.00
IUUC-Nle-070039	Nomascus leucogenys	42.01	0.00e+00	719.00
IUUC-Opr-070960	Ochotona princeps	40.77	0.00e+00	673.00
IUUC-Ont-072418	Oreochromis niloticus	41.93	0.00e+00	719.00
IUUC-Oan-072885	Ornithorhynchus anatinus	41.99	2.00e-142	500.00
IUUC-Ocu-074177	Oryctolagus cuniculus	42.23	0.00e+00	721.00
IUUC-Ola-086880	Oryzias latipes	42.33	0.00e+00	724.00
IUUC-Oga-088970	Otolemur garnettii	42.04	0.00e+00	721.00
IUUC-Oar-090422	Ovis aries	42.15	0.00e+00	719.00
IUUC-Ptr-090799	Pan troglodytes	41.89	0.00e+00	702.00
IUUC-Pan-092441	Papio anubis	42.19	0.00e+00	722.00
IUUC-Psi-093530	Pelodiscus sinensis	42.57	0.00e+00	743.00
IUUC-Pfo-097530	Poecilia formosa	42.07	0.00e+00	711.00
IUUC-Pab-098174	Pongo abelii	41.63	0.00e+00	676.00
IUUC-Pca-100829	Procavia capensis	44.46	5.00e-179	622.00
IUUC-Pva-103186	Pteropus vampyrus	41.88	0.00e+00	714.00
IUUC-Rno-105692	Rattus norvegicus	42.23	0.00e+00	721.00
IUUC-Sha-107233	Sarcophilus harrisii	41.29	0.00e+00	705.00
IUUC-Sly-110976	Solanum lycopersicum	57.77	0.00e+00	1273.00
IUUC-Ssc-115295	Sus scrofa	42.23	0.00e+00	721.00
IUUC-Tgu-117484	Taeniopygia guttata	42.32	0.00e+00	720.00
IUUC-Tru-118745	Takifugu rubripes	41.93	0.00e+00	711.00
IUUC-Tsy-119261	Tarsius syrichta	46.52	3.00e-141	496.00
IUUC-Tni-120764	Tetraodon nigroviridis	42.03	0.00e+00	710.00
IUUC-Tbe-128117	Tupaia belangeri	41.96	4.00e-112	399.00
IUUC-Ttr-128478	Tursiops truncatus	41.34	0.00e+00	699.00
IUUC-Vpa-130209	Vicugna pacos	52.66	4.00e-84	306.00
IUUC-Vvi-130849	Vitis vinifera	58.25	0.00e+00	1307.00
IUUC-Xtr-132668	Xenopus tropicalis	40.61	0.00e+00	706.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence