iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fal-036996

Ensembl Protein ID

ENSFALP00000011304.1

UniProt Accession

U3K8F0; U3K8F0_FICAL

Genbank Protein ID

ENSFALP00000011304

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTO01021052

Gene Name

RLIM

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFALG00000010831.1	ENSFALT00000011349.1	ENSFALP00000011304.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.80e-07	30.7	551	592

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C +++ +g  ++ lpC H +h +C+ +w       s + +CP+Cr
   Q: 551  CSVCITEYTEGnkLRKLPCSHEYHVHCIDRW------LSENSTCPICR 592
           9*******5554499****************......**********8 PP

Organism

Ficedula albicollis

Protein Sequence
(Fasta)

MESSDSSDKG SIDQSEAQRQ SQLDRLDREE AFYQFVNNLS EEDYRLMRDN NLLGTPGEIT 60
EEELLRRLHQ VKEGPPQQNS DENRGAESAE DVSNGDSIID WLNSVRQTGN TTRSGQRGNQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGAGGC AGGAGCAGTC TAAACATTCC AGTAAGTTCA GTCTGGCCAT GGAGAGCTCT 60
GCAGCGGGCT GGGAGGTGAG GCTTAGGTTG GACAATGAGC TCAGTGAGCT GAGTGCACAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043433--P:negative regulation of sequence-specific DNA binding transcription factor activity
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001407	Ailuropoda melanoleuca	77.28	1.00e-152	533.00
IUUC-Atr-002539	Amborella trichopoda	44.29	3.00e-15	75.50
IUUC-Apl-003969	Anas platyrhynchos	89.85	0.00e+00	960.00
IUUC-Aca-005377	Anolis carolinensis	78.70	6.00e-172	597.00
IUUC-Ame-011097	Astyanax mexicanus	60.25	4.00e-114	405.00
IUUC-Bta-013113	Bos taurus	78.82	4.00e-158	551.00
IUUC-Bdi-014392	Brachypodium distachyon	47.06	5.00e-14	70.90
IUUC-Bol-015085	Brassica oleracea	43.01	2.00e-16	79.30
IUUC-Bra-017624	Brassica rapa	43.01	2.00e-16	79.30
IUUC-Cja-018860	Callithrix jacchus	77.15	6.00e-151	527.00
IUUC-Cfa-020358	Canis familiaris	75.22	2.00e-154	539.00
IUUC-Cpo-021533	Cavia porcellus	77.19	2.00e-137	481.00
IUUC-Cre-022755	Chlamydomonas reinhardtii	44.68	9.00e-14	67.40
IUUC-Csa-023242	Chlorocebus sabaeus	73.20	3.00e-145	508.00
IUUC-Cho-024536	Choloepus hoffmanni	67.58	1.00e-124	439.00
IUUC-Cne-026941	Cryptococcus neoformans	34.94	1.00e-10	61.60
IUUC-Dre-027894	Danio rerio	57.51	2.00e-169	588.00
IUUC-Dno-029606	Dasypus novemcinctus	77.83	6.00e-162	563.00
IUUC-Dor-031042	Dipodomys ordii	71.71	7.00e-142	496.00
IUUC-Ete-033099	Echinops telfairi	70.79	5.00e-146	511.00
IUUC-Eca-033976	Equus caballus	77.03	3.00e-162	564.00
IUUC-Eeu-034964	Erinaceus europaeus	67.84	7.00e-178	617.00
IUUC-Fca-035662	Felis catus	77.28	1.00e-152	533.00
IUUC-Gga-040816	Gallus gallus	89.59	0.00e+00	944.00
IUUC-Gac-041767	Gasterosteus aculeatus	63.90	4.00e-102	365.00
IUUC-Gma-043292	Glycine max	47.37	3.00e-16	79.30
IUUC-Ggo-044754	Gorilla gorilla	77.53	3.00e-158	551.00
IUUC-Hsa-045776	Homo sapiens	77.53	3.00e-158	551.00
IUUC-Hvu-047745	Hordeum vulgare	52.94	1.00e-14	74.30
IUUC-Itr-048044	Ictidomys tridecemlineatus	75.85	5.00e-160	557.00
IUUC-Lch-050178	Latimeria chalumnae	68.27	7.00e-131	460.00
IUUC-Lpe-051680	Leersia perrieri	44.16	2.00e-14	73.90
IUUC-Loc-052124	Lepisosteus oculatus	58.49	4.00e-163	567.00
IUUC-Laf-054328	Loxodonta africana	77.70	6.00e-156	543.00
IUUC-Mcc-054739	Macaca mulatta	77.75	9.00e-159	553.00
IUUC-Meu-056359	Macropus eugenii	75.48	0.00e+00	764.00
IUUC-Mtr-058167	Medicago truncatula	47.37	2.00e-15	76.60
IUUC-Mga-059838	Meleagris gallopavo	90.08	0.00e+00	960.00
IUUC-Mmr-060608	Microcebus murinus	75.56	1.00e-152	533.00
IUUC-Mdo-061961	Monodelphis domestica	79.02	5.00e-155	541.00
IUUC-Mmu-064278	Mus musculus	72.17	4.00e-136	478.00
IUUC-Mac-064703	Musa acuminata	44.44	9.00e-15	73.90
IUUC-Mpu-066539	Mustela putorius furo	70.36	7.00e-121	427.00
IUUC-Mlu-066930	Myotis lucifugus	78.33	8.00e-166	576.00
IUUC-Nle-069311	Nomascus leucogenys	77.53	5.00e-158	550.00
IUUC-Opr-071124	Ochotona princeps	77.95	2.00e-69	256.00
IUUC-Ont-071511	Oreochromis niloticus	61.08	4.00e-97	348.00
IUUC-Oan-073036	Ornithorhynchus anatinus	80.80	3.00e-159	555.00
IUUC-Ocu-073795	Oryctolagus cuniculus	74.23	0.00e+00	737.00
IUUC-Oba-075403	Oryza barthii	44.16	2.00e-14	73.90
IUUC-Obr-076503	Oryza brachyantha	44.16	2.00e-14	73.20
IUUC-Ogl-077574	Oryza glaberrima	44.16	2.00e-14	73.90
IUUC-Ogu-077986	Oryza glumaepatula	44.16	2.00e-14	73.90
IUUC-Oin-079091	Oryza indica	44.16	1.00e-14	73.90
IUUC-Ome-081627	Oryza meridionalis	44.16	2.00e-14	73.90
IUUC-Oni-082260	Oryza nivara	44.16	2.00e-14	73.90
IUUC-Opu-083578	Oryza punctata	44.16	2.00e-14	73.90
IUUC-Oru-084794	Oryza rufipogon	44.16	2.00e-14	73.90
IUUC-Osa-085348	Oryza sativa	44.16	2.00e-14	73.90
IUUC-Ola-087461	Oryzias latipes	91.40	6.00e-51	195.00
IUUC-Oga-088022	Otolemur garnettii	74.88	0.00e+00	753.00
IUUC-Oar-089348	Ovis aries	79.06	1.00e-158	553.00
IUUC-Ptr-090604	Pan troglodytes	77.30	2.00e-158	551.00
IUUC-Pan-092322	Papio anubis	77.75	9.00e-159	553.00
IUUC-Psi-093936	Pelodiscus sinensis	83.14	0.00e+00	846.00
IUUC-Ppa-095197	Physcomitrella patens	46.58	1.00e-16	80.90
IUUC-Pab-098671	Pongo abelii	77.30	2.00e-157	548.00
IUUC-Pop-099808	Populus trichocarpa	45.95	6.00e-16	78.20
IUUC-Pca-100263	Procavia capensis	74.47	0.00e+00	723.00
IUUC-Ppe-101995	Prunus persica	46.58	1.00e-15	77.00
IUUC-Pva-102709	Pteropus vampyrus	74.55	5.00e-147	514.00
IUUC-Ptt-103976	Puccinia triticina	44.68	1.00e-10	59.30
IUUC-Rno-105759	Rattus norvegicus	73.88	1.00e-134	473.00
IUUC-Sha-106792	Sarcophilus harrisii	73.55	0.00e+00	703.00
IUUC-Sly-111405	Solanum lycopersicum	45.83	3.00e-16	79.00
IUUC-Stu-112609	Solanum tuberosum	47.22	2.00e-16	79.70
IUUC-Sar-113271	Sorex araneus	72.87	2.00e-142	498.00
IUUC-Sbi-114435	Sorghum bicolor	56.25	2.00e-14	73.90
IUUC-Ssc-115738	Sus scrofa	77.51	1.00e-159	556.00
IUUC-Tgu-117205	Taeniopygia guttata	93.88	0.00e+00	966.00
IUUC-Tru-118123	Takifugu rubripes	61.60	3.00e-91	328.00
IUUC-Tsy-119421	Tarsius syrichta	77.28	6.00e-164	570.00
IUUC-Tni-120299	Tetraodon nigroviridis	61.82	4.00e-87	315.00
IUUC-Tca-121367	Theobroma cacao	47.37	2.00e-16	79.70
IUUC-Tae-125871	Triticum aestivum	34.07	6.00e-16	77.40
IUUC-Tur-126084	Triticum urartu	48.89	2.00e-13	71.60
IUUC-Tbe-127543	Tupaia belangeri	75.49	0.00e+00	793.00
IUUC-Vpa-130058	Vicugna pacos	77.06	3.00e-152	531.00
IUUC-Vvi-131093	Vitis vinifera	47.37	2.00e-16	80.10
IUUC-Xtr-132663	Xenopus tropicalis	64.00	1.00e-165	576.00
IUUC-Xma-133076	Xiphophorus maculatus	62.04	2.00e-103	369.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence