iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Dre-027750

Ensembl Protein ID

ENSDARP00000069979.4

UniProt Accession

F1QA30; F1QA30_DANRE

Genbank Protein ID

ENSDARP00000069979

Protein Name

RING1 and YY1-binding protein B

Genbank Nucleotide ID

BX546459

Gene Name

rybpb

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000053459.5	ENSDART00000075497.5	ENSDARP00000069979.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/ZnF/NZF	1.30e-13	51.0	20	48

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/ZnF/NZF

   S: 2    eaqWaCsaCTflNePeavkCemCsrpRgc 30
           +++W+Cs+CTf+N++ea+kC++C+ ++g+
   Q: 20   NGFWDCSVCTFRNSAEAFKCSICDVRKGT 48
           789************************95 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MGDKKSPTRP KRQAKPTADN GFWDCSVCTF RNSAEAFKCS ICDVRKGTST RKPRINSQLV 60
AQQVAQQYAT PPPPKKEKKE KPERPEKDRA EEERPDINPP DEHPVEQRDK EKSEKEQPEK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTCGGGGGA AGGCGAGTCT GCCTGCAAGC GCTTCTCTCA GTGTGGATCC ACCATACACA 60
CACATACACG CTCACACGGA CCTTTACGCA CAATTATTGT TAATTACGGA ACCCGTTTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome

Interpro

IPR033774--YAF2_RYBP
IPR001876--Znf_RanBP2

PROSITE

PS01358--ZF_RANBP2_1
PS50199--ZF_RANBP2_2

Pfam

PF17219--YAF2_RYBP
PF00641--zf-RanBP

SMART

SM00547--ZnF_RBZ

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-004725	Anolis carolinensis	96.49	1.00e-29	122.00
IUUC-Bta-012724	Bos taurus	64.89	4.00e-22	97.40
IUUC-Cpo-022408	Cavia porcellus	64.89	3.00e-22	97.80
IUUC-Csa-023628	Chlorocebus sabaeus	96.49	1.00e-29	122.00
IUUC-Dno-029292	Dasypus novemcinctus	64.89	3.00e-22	97.80
IUUC-Dor-030691	Dipodomys ordii	64.89	3.00e-22	97.80
IUUC-Fca-035645	Felis catus	64.89	3.00e-22	97.80
IUUC-Fal-036647	Ficedula albicollis	66.41	5.00e-23	101.00
IUUC-Gga-040262	Gallus gallus	96.49	2.00e-29	122.00
IUUC-Gac-041354	Gasterosteus aculeatus	94.12	6.00e-29	121.00
IUUC-Ggo-045026	Gorilla gorilla	64.89	3.00e-22	97.80
IUUC-Hsa-046566	Homo sapiens	96.49	1.00e-29	122.00
IUUC-Itr-048728	Ictidomys tridecemlineatus	64.12	1.00e-21	95.90
IUUC-Lch-050014	Latimeria chalumnae	96.49	1.00e-29	123.00
IUUC-Loc-051746	Lepisosteus oculatus	78.76	1.00e-67	249.00
IUUC-Mga-059812	Meleagris gallopavo	66.41	5.00e-23	100.00
IUUC-Mmr-060766	Microcebus murinus	86.27	4.00e-24	102.00
IUUC-Mmu-063177	Mus musculus	96.49	1.00e-29	122.00
IUUC-Mlu-067973	Myotis lucifugus	69.88	4.00e-13	67.40
IUUC-Opr-070623	Ochotona princeps	64.89	3.00e-22	97.80
IUUC-Ont-071994	Oreochromis niloticus	88.46	2.00e-29	122.00
IUUC-Oan-072949	Ornithorhynchus anatinus	96.49	1.00e-29	122.00
IUUC-Ocu-074013	Oryctolagus cuniculus	64.89	4.00e-22	98.60
IUUC-Oar-090312	Ovis aries	64.89	4.00e-22	97.80
IUUC-Pan-091877	Papio anubis	96.49	1.00e-29	122.00
IUUC-Pfo-096909	Poecilia formosa	67.49	7.00e-58	217.00
IUUC-Pab-098578	Pongo abelii	95.74	6.00e-23	101.00
IUUC-Pca-100706	Procavia capensis	65.65	2.00e-22	98.60
IUUC-Rno-105156	Rattus norvegicus	95.92	2.00e-24	106.00
IUUC-Sar-113234	Sorex araneus	69.23	1.00e-22	99.80
IUUC-Ssc-116262	Sus scrofa	64.89	3.00e-22	97.80
IUUC-Tru-118642	Takifugu rubripes	92.65	9.00e-28	117.00
IUUC-Tsy-119328	Tarsius syrichta	64.89	3.00e-22	97.80
IUUC-Tni-120066	Tetraodon nigroviridis	64.46	2.00e-61	228.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence