iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA
Protein-protein Interaction
IID	iRefIndex	PINA	Mentha
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.30e-08	35.5	10	60

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkw...pglknssskefrCPlCr 46
           C++C+e+f+d+  p++ +CgH  +++C+ ++   +   + s ++ +CP+Cr
   Q: 10   CPVCQEEFDDQkaPFIISCGHSLCETCIVHLksdYSDAYGSGGQTQCPTCR 60
           ********66555***************6666777888899*********8 PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MDVNEELPTC PVCQEEFDDQ KAPFIISCGH SLCETCIVHL KSDYSDAYGS GGQTQCPTCR 60
AVVSKEKRTK NFALTNAVTM IQKLREKPKK PANAVDCTQC TKYDNESDMF VCRNCVTDAF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGATCCTGAA AACGTAGATC TTCTTCTCGT AGATCTTGAA AACGTGGTGC CCCGCTCAAA 60
AACATCGTGG GCGGAGCAAA AAACCGTGCC AGAATTGCAA AAATGGGCGT TTTTTTGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF14634--zf-RING_5

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

cel:CELE_Y47G6A.14

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-005168	Anolis carolinensis	36.36	4.00e-10	58.20
IUUC-Aly-006480	Arabidopsis lyrata	28.57	8.00e-09	55.80
IUUC-Ago-007969	Ashbya gossypii	31.34	5.00e-04	38.50
IUUC-Bta-013071	Bos taurus	29.41	3.00e-10	59.30
IUUC-Cfa-021152	Canis familiaris	23.87	2.00e-08	53.10
IUUC-Csa-023476	Chlorocebus sabaeus	37.84	1.00e-08	53.10
IUUC-Dre-028391	Danio rerio	31.90	7.00e-10	57.40
IUUC-Dno-029511	Dasypus novemcinctus	31.31	1.00e-10	58.90
IUUC-Eca-034336	Equus caballus	28.18	5.00e-08	52.00
IUUC-Fca-035533	Felis catus	28.18	5.00e-09	54.30
IUUC-Gmo-039179	Gadus morhua	37.04	1.00e-09	56.60
IUUC-Hsa-046707	Homo sapiens	32.97	1.00e-09	56.60
IUUC-Lch-049738	Latimeria chalumnae	39.19	1.00e-10	59.30
IUUC-Laf-053984	Loxodonta africana	34.88	4.00e-09	55.10
IUUC-Mcc-055643	Macaca mulatta	36.00	6.00e-08	50.80
IUUC-Mtr-058731	Medicago truncatula	34.18	2.00e-11	63.20
IUUC-Mdo-062995	Monodelphis domestica	33.33	2.00e-08	51.60
IUUC-Mmu-063682	Mus musculus	28.18	3.00e-10	58.50
IUUC-Mpu-066377	Mustela putorius furo	28.18	6.00e-09	54.30
IUUC-Opr-070458	Ochotona princeps	32.22	9.00e-09	52.80
IUUC-Oga-088082	Otolemur garnettii	29.41	5.00e-09	52.40
IUUC-Pan-092332	Papio anubis	41.10	7.00e-08	50.80
IUUC-Ppa-096025	Physcomitrella patens	31.63	2.00e-08	51.20
IUUC-Pfo-097051	Poecilia formosa	36.08	5.00e-10	57.80
IUUC-Pva-102131	Pteropus vampyrus	33.94	5.00e-10	57.80
IUUC-Rno-105401	Rattus norvegicus	30.00	6.00e-09	54.30
IUUC-Ssc-115780	Sus scrofa	29.20	7.00e-08	51.60
IUUC-Tni-120905	Tetraodon nigroviridis	38.16	2.00e-10	58.90
IUUC-Vda-129777	Verticillium dahliae	33.33	6.00e-06	43.90
IUUC-Vpa-130599	Vicugna pacos	30.68	2.00e-08	52.80
IUUC-Xtr-132394	Xenopus tropicalis	35.35	4.00e-09	55.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence