iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076308

Ensembl Protein ID

OB05G29950.1

UniProt Accession

J3M8S1; J3M8S1_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB05G29950	OB05G29950.1	OB05G29950.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	51.72	9.00e-113	405.00	IUUC-Ath-006986
E3 activity/RING/RING	38.78	6.00e-20	97.80	IUUC-Hsa-045826

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MADVGSLEKM GRELKCPICL SLLSSAVSIS CNHIFCNDCL TESMKSASSC PVCKIPFRRR 60
EMRPAPHMDN LVSIFKSMEA ATGINVVSTQ VDPAVKVADR SECVNSGKNS KSSLKPLARK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGACG TGGGGAGCCT GGAGAAGATG GGCCGAGAGC TCAAGTGCCC CATCTGGTAA 60
AATGAATCCC CTCGCGATCG CTCCCCCCGC CTTCTCTCCG TTTCGTGTTT TTTGGATTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR031099--BRCA1-associated
IPR001357--BRCT_dom
IPR034732--EPHD
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50172--BRCT
PS51805--EPHD
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00533--BRCT
PF16589--BRCT_2

SMART

SM00292--BRCT
SM00184--RING

Gene Ontology

GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0071480--P:cellular response to gamma radiation
GO:0000724--P:double-strand break repair via homologous recombination

KEGG

obr:102701266

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000225	Aegilops tauschii	61.45	0.00e+00	1138.00
IUUC-Aml-002346	Ailuropoda melanoleuca	32.16	1.00e-21	97.40
IUUC-Atr-002625	Amborella trichopoda	48.38	9.00e-120	424.00
IUUC-Apl-004108	Anas platyrhynchos	29.27	1.00e-18	87.40
IUUC-Aca-005387	Anolis carolinensis	28.81	6.00e-20	91.70
IUUC-Ath-006986	Arabidopsis thaliana	52.33	5.00e-115	407.00
IUUC-Ame-011720	Astyanax mexicanus	27.16	9.00e-18	85.50
IUUC-Bta-013417	Bos taurus	38.78	1.00e-21	97.80
IUUC-Bci-013998	Botrytis cinerea	39.58	5.00e-07	48.10
IUUC-Bdi-014760	Brachypodium distachyon	61.98	0.00e+00	1185.00
IUUC-Bol-016476	Brassica oleracea	50.24	4.00e-114	404.00
IUUC-Bra-017176	Brassica rapa	50.99	2.00e-115	409.00
IUUC-Cel-018370	Caenorhabditis elegans	31.51	4.00e-07	48.10
IUUC-Cja-019415	Callithrix jacchus	38.10	2.00e-21	97.10
IUUC-Cfa-020351	Canis familiaris	38.78	1.00e-21	97.40
IUUC-Cpo-021746	Cavia porcellus	38.78	2.00e-21	97.10
IUUC-Cre-022597	Chlamydomonas reinhardtii	32.22	1.00e-09	56.60
IUUC-Csa-023450	Chlorocebus sabaeus	38.10	4.00e-21	95.90
IUUC-Cho-024530	Choloepus hoffmanni	32.33	4.00e-14	73.60
IUUC-Csv-025987	Ciona savignyi	24.77	5.00e-14	71.20
IUUC-Cme-027224	Cyanidioschyzon merolae	40.00	5.00e-10	59.30
IUUC-Dno-029038	Dasypus novemcinctus	38.78	1.00e-21	97.40
IUUC-Dor-030826	Dipodomys ordii	39.17	1.00e-16	80.50
IUUC-Ete-033061	Echinops telfairi	33.33	8.00e-24	104.00
IUUC-Eca-033446	Equus caballus	31.72	3.00e-14	74.30
IUUC-Eeu-034749	Erinaceus europaeus	43.04	6.00e-15	74.30
IUUC-Fca-035414	Felis catus	39.46	8.00e-22	98.20
IUUC-Fal-037357	Ficedula albicollis	31.53	1.00e-20	94.40
IUUC-Gmo-038782	Gadus morhua	31.47	4.00e-16	79.70
IUUC-Gga-040255	Gallus gallus	30.73	3.00e-17	82.80
IUUC-Gac-042296	Gasterosteus aculeatus	27.23	4.00e-21	96.70
IUUC-Gma-044372	Glycine max	50.59	1.00e-118	421.00
IUUC-Ggo-045300	Gorilla gorilla	38.78	8.00e-22	98.20
IUUC-Hsa-045826	Homo sapiens	38.78	1.00e-21	97.40
IUUC-Itr-048456	Ictidomys tridecemlineatus	36.73	2.00e-19	90.10
IUUC-Lch-050674	Latimeria chalumnae	34.45	2.00e-15	77.00
IUUC-Lpe-050895	Leersia perrieri	78.18	0.00e+00	1528.00
IUUC-Loc-051952	Lepisosteus oculatus	30.40	4.00e-21	96.70
IUUC-Laf-054591	Loxodonta africana	37.41	3.00e-21	96.30
IUUC-Mcc-055017	Macaca mulatta	38.10	3.00e-21	96.30
IUUC-Meu-056452	Macropus eugenii	34.52	1.00e-10	59.30
IUUC-Mtr-058400	Medicago truncatula	54.34	1.00e-128	453.00
IUUC-Mga-059484	Meleagris gallopavo	30.73	4.00e-17	82.80
IUUC-Mmr-061544	Microcebus murinus	38.78	2.00e-22	100.00
IUUC-Mdo-062408	Monodelphis domestica	37.29	6.00e-17	82.00
IUUC-Mmu-064203	Mus musculus	36.73	8.00e-20	91.70
IUUC-Mac-065131	Musa acuminata	44.22	0.00e+00	811.00
IUUC-Mpu-066899	Mustela putorius furo	39.46	1.00e-21	97.40
IUUC-Mlu-067781	Myotis lucifugus	39.46	9.00e-23	101.00
IUUC-Nle-069031	Nomascus leucogenys	38.10	3.00e-21	96.30
IUUC-Opr-071057	Ochotona princeps	36.59	1.00e-12	67.00
IUUC-Ont-072380	Oreochromis niloticus	27.80	3.00e-20	93.60
IUUC-Oan-073015	Ornithorhynchus anatinus	37.66	1.00e-11	63.90
IUUC-Ocu-074785	Oryctolagus cuniculus	37.41	5.00e-21	95.50
IUUC-Oba-075676	Oryza barthii	80.64	0.00e+00	1522.00
IUUC-Ogl-077654	Oryza glaberrima	80.64	0.00e+00	1522.00
IUUC-Ogu-078659	Oryza glumaepatula	80.84	0.00e+00	1550.00
IUUC-Oin-079086	Oryza indica	81.04	0.00e+00	1557.00
IUUC-Olo-080264	Oryza longistaminata	79.74	0.00e+00	1488.00
IUUC-Ome-081445	Oryza meridionalis	81.19	0.00e+00	1566.00
IUUC-Oni-082502	Oryza nivara	81.04	0.00e+00	1552.00
IUUC-Opu-083700	Oryza punctata	81.26	0.00e+00	1610.00
IUUC-Oru-085093	Oryza rufipogon	81.14	0.00e+00	1559.00
IUUC-Osa-086087	Oryza sativa	81.24	0.00e+00	1562.00
IUUC-Ola-086863	Oryzias latipes	27.39	5.00e-19	89.40
IUUC-Olu-087771	Ostreococcus lucimarinus	31.82	5.00e-08	51.20
IUUC-Oga-088383	Otolemur garnettii	41.53	1.00e-18	87.40
IUUC-Oar-089357	Ovis aries	38.36	3.00e-21	96.30
IUUC-Ptr-090959	Pan troglodytes	38.78	1.00e-21	97.80
IUUC-Pan-092160	Papio anubis	38.10	3.00e-21	96.30
IUUC-Psi-093036	Pelodiscus sinensis	29.27	3.00e-17	83.20
IUUC-Pfo-096328	Poecilia formosa	28.22	7.00e-19	89.40
IUUC-Pab-098198	Pongo abelii	39.46	4.00e-22	99.00
IUUC-Pop-099956	Populus trichocarpa	54.91	1.00e-119	423.00
IUUC-Pca-100698	Procavia capensis	28.95	4.00e-18	87.00
IUUC-Ppe-101676	Prunus persica	53.81	2.00e-121	429.00
IUUC-Pva-102243	Pteropus vampyrus	36.05	2.00e-18	87.00
IUUC-Rno-104832	Rattus norvegicus	40.00	2.00e-19	90.10
IUUC-Sha-106630	Sarcophilus harrisii	37.65	3.00e-11	62.40
IUUC-Sit-110609	Setaria italica	62.16	0.00e+00	1121.00
IUUC-Sly-111863	Solanum lycopersicum	48.89	4.00e-118	418.00
IUUC-Stu-112154	Solanum tuberosum	48.43	7.00e-117	414.00
IUUC-Sar-113096	Sorex araneus	33.33	1.00e-12	65.90
IUUC-Sbi-114470	Sorghum bicolor	61.28	0.00e+00	1150.00
IUUC-Sre-115123	Sporisorium reilianum	37.93	3.00e-06	45.40
IUUC-Ssc-115611	Sus scrofa	38.10	2.00e-21	97.10
IUUC-Tgu-116812	Taeniopygia guttata	29.57	4.00e-19	89.00
IUUC-Tru-117895	Takifugu rubripes	24.69	3.00e-17	84.00
IUUC-Tsy-119446	Tarsius syrichta	31.63	6.00e-18	85.10
IUUC-Tni-119654	Tetraodon nigroviridis	27.53	3.00e-17	83.60
IUUC-Tca-121417	Theobroma cacao	55.40	3.00e-142	498.00
IUUC-Tae-124838	Triticum aestivum	61.25	0.00e+00	1121.00
IUUC-Tur-126725	Triticum urartu	61.15	0.00e+00	1053.00
IUUC-Tbe-127550	Tupaia belangeri	38.78	4.00e-21	95.90
IUUC-Ttr-128364	Tursiops truncatus	30.73	3.00e-15	76.30
IUUC-Vda-129938	Verticillium dahliae	32.50	4.00e-08	52.40
IUUC-Vpa-130659	Vicugna pacos	32.16	4.00e-22	99.00
IUUC-Vvi-131586	Vitis vinifera	54.68	6.00e-120	425.00
IUUC-Xtr-131846	Xenopus tropicalis	26.91	1.00e-18	87.80
IUUC-Xma-133651	Xiphophorus maculatus	29.89	2.00e-12	67.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence