iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	96.08	2.00e-137	485.00	IUUC-Hsa-046980

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MAVGNINELP ENILLELFTH IPARQLLLRC RPVCSLWRDL IDLVTLWKRK CLQEGFITED 60
WDQPVADWKI FYFLRSLQRN LLHNPCAEEG FEFWSLDVNG GDEWKVEDLS KDQRKEFPND 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCAGCGCGA CCAAACGTGG GTGACAAGGA GAATGGAGAG GGAGAGGGGC CAGTGTTGTG 60
GGATTATGGT TAGGGCGGGG TCTGATGAGT AGTGGGCGGG ACTGTGCCTT AGGTGCTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR007397--F-box-assoc_dom
IPR001810--F-box_dom
IPR008979--Galactose-bd-like

PROSITE

PS51114--FBA
PS50181--FBOX

Pfam

PF12937--F-box-like
PF04300--FBA

SMART

SM01198--FBA
SM00256--FBOX

KEGG

rno:500587

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000136	Aegilops tauschii	48.57	4.00e-04	39.30
IUUC-Afl-008683	Aspergillus flavus	27.69	3.50e-01	29.60
IUUC-Aor-009983	Aspergillus oryzae	27.69	2.90e-01	30.00
IUUC-Bta-013435	Bos taurus	96.86	1.00e-140	491.00
IUUC-Cpo-022098	Cavia porcellus	92.55	5.00e-144	503.00
IUUC-Cre-022851	Chlamydomonas reinhardtii	28.21	3.50e+00	26.60
IUUC-Dno-029141	Dasypus novemcinctus	93.05	2.00e-103	367.00
IUUC-Fca-035783	Felis catus	96.08	1.00e-138	485.00
IUUC-Ggo-044871	Gorilla gorilla	96.08	4.00e-139	486.00
IUUC-Hsa-046980	Homo sapiens	96.08	7.00e-139	486.00
IUUC-Itr-048981	Ictidomys tridecemlineatus	96.86	2.00e-140	490.00
IUUC-Laf-054093	Loxodonta africana	94.90	6.00e-137	479.00
IUUC-Mdo-062841	Monodelphis domestica	83.12	5.00e-119	420.00
IUUC-Mmu-063279	Mus musculus	98.82	1.00e-141	495.00
IUUC-Mpu-066829	Mustela putorius furo	96.47	2.00e-139	487.00
IUUC-Mlu-067889	Myotis lucifugus	95.26	1.00e-136	478.00
IUUC-Nle-069509	Nomascus leucogenys	84.65	2.00e-118	418.00
IUUC-Oan-073142	Ornithorhynchus anatinus	81.70	1.00e-117	416.00
IUUC-Oin-080209	Oryza indica	40.54	6.00e-03	35.40
IUUC-Oga-089060	Otolemur garnettii	94.09	8.00e-145	505.00
IUUC-Oar-090113	Ovis aries	96.86	2.00e-140	491.00
IUUC-Ptr-090986	Pan troglodytes	95.69	4.00e-138	483.00
IUUC-Pma-094635	Petromyzon marinus	41.46	4.00e-31	127.00
IUUC-Ppe-101983	Prunus persica	30.88	4.40e-01	28.50
IUUC-Sce-106428	Saccharomyces cerevisiae	25.23	6.00e-03	37.70
IUUC-Sha-107296	Sarcophilus harrisii	82.21	2.00e-125	441.00
IUUC-Sit-109886	Setaria italica	26.58	2.70e-01	29.60
IUUC-Ssc-115419	Sus scrofa	96.86	2.00e-140	491.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence