iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-109441

Ensembl Protein ID

EFJ24278

UniProt Accession

D8QY36; D8QY36_SELML

Genbank Protein ID

EFJ24278.1; EFJ35540.1

Protein Name

PHD finger protein ING

Genbank Nucleotide ID

GL377590; GL377568

Gene Name

SELMODRAFT_228279; SELMODRAFT_270360

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_228279	EFJ24278	EFJ24278

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.60e-08	34.2	159	206

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCek..Cr.ewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C +C + + +e  ++ C++  C+ ewfH++C +     e+p+ + w+Cp+C++
   Q: 159  TYC-LCNQVSYGE--MIACDNpdCKiEWFHFECAGVR---ERPKGK-WYCPDCSQ 206
           69*.*******99..**********************...999997.******86 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MTGISFLEDF IGSTASLPAE LQQNYSLIRQ LDEQQNELQR QMHGCCAHGL EDVKQVLKAG 60
GAAAEAVANK YASSIASVHK TCVDVANEKV ALALSTYDMV DNYIQRLDKY LKKYKEDCEQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGTTAGGGC AAAGTTCACT GTGGGCAACA CAAGGCATAG ATCCTGGGGC TCGATCGGTC 60
GATCAGGCAA GAAATTCTAG CTTGTAAGCG TCGATCTGGT GGCGGTGCGT TGGTCCGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028651--ING_fam
IPR024610--ING_N_histone_binding
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF12998--ING

SMART

SM01408--ING
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
GO:0016569--P:covalent chromatin modification

KEGG

smo:SELMODRAFT_228279; smo:SELMODRAFT_270360

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001338	Ailuropoda melanoleuca	30.59	2.00e-34	138.00
IUUC-Atr-002906	Amborella trichopoda	42.92	2.00e-49	187.00
IUUC-Apl-004097	Anas platyrhynchos	31.23	8.00e-37	145.00
IUUC-Aca-005009	Anolis carolinensis	34.02	4.00e-40	156.00
IUUC-Aly-005815	Arabidopsis lyrata	39.22	5.00e-41	159.00
IUUC-Ath-006765	Arabidopsis thaliana	39.22	1.00e-40	158.00
IUUC-Ago-007859	Ashbya gossypii	61.11	7.70e+00	23.90
IUUC-Acl-008091	Aspergillus clavatus	62.96	8.00e-19	88.20
IUUC-Ate-010297	Aspergillus terreus	46.74	4.00e-20	92.40
IUUC-Ame-011879	Astyanax mexicanus	33.60	2.00e-40	158.00
IUUC-Bta-012590	Bos taurus	36.91	4.00e-40	157.00
IUUC-Bdi-014504	Brachypodium distachyon	41.56	4.00e-50	190.00
IUUC-Bol-015245	Brassica oleracea	38.56	8.00e-42	162.00
IUUC-Bra-017027	Brassica rapa	39.32	7.00e-42	162.00
IUUC-Cja-019518	Callithrix jacchus	36.29	1.00e-40	158.00
IUUC-Cfa-020620	Canis familiaris	35.77	9.00e-42	162.00
IUUC-Cpo-022085	Cavia porcellus	34.82	1.00e-40	158.00
IUUC-Cre-022920	Chlamydomonas reinhardtii	34.50	7.00e-27	113.00
IUUC-Csa-023421	Chlorocebus sabaeus	34.13	4.00e-40	157.00
IUUC-Cho-024577	Choloepus hoffmanni	76.36	2.00e-26	111.00
IUUC-Cin-025479	Ciona intestinalis	36.60	2.00e-39	155.00
IUUC-Cne-027005	Cryptococcus neoformans	51.02	8.00e-12	63.90
IUUC-Dre-027430	Danio rerio	36.18	7.00e-42	162.00
IUUC-Dno-029766	Dasypus novemcinctus	32.78	2.00e-35	141.00
IUUC-Dor-030910	Dipodomys ordii	70.59	6.00e-29	119.00
IUUC-Dse-031323	Dothistroma septosporum	55.36	2.00e-16	80.10
IUUC-Dme-032200	Drosophila melanogaster	67.65	1.00e-29	122.00
IUUC-Ete-032510	Echinops telfairi	66.67	3.00e-25	108.00
IUUC-Eca-033493	Equus caballus	36.64	3.00e-39	154.00
IUUC-Eeu-034948	Erinaceus europaeus	33.61	3.00e-36	144.00
IUUC-Fca-036368	Felis catus	32.42	8.00e-38	149.00
IUUC-Fal-036998	Ficedula albicollis	34.54	3.00e-41	160.00
IUUC-Fox-037925	Fusarium oxysporum	48.15	1.00e-15	76.60
IUUC-Gmo-038982	Gadus morhua	33.72	2.00e-40	158.00
IUUC-Gga-040578	Gallus gallus	35.04	1.00e-42	165.00
IUUC-Gac-042172	Gasterosteus aculeatus	35.08	3.00e-41	160.00
IUUC-Gma-044339	Glycine max	39.58	7.00e-47	179.00
IUUC-Ggo-045559	Gorilla gorilla	32.03	6.00e-39	153.00
IUUC-Hsa-045965	Homo sapiens	34.13	4.00e-40	157.00
IUUC-Hvu-047046	Hordeum vulgare	69.57	7.00e-31	126.00
IUUC-Itr-047978	Ictidomys tridecemlineatus	32.81	1.00e-38	152.00
IUUC-Kpa-049229	Komagataella pastoris	55.10	9.00e-16	76.30
IUUC-Lch-050397	Latimeria chalumnae	76.36	2.00e-26	112.00
IUUC-Lpe-050822	Leersia perrieri	41.39	2.00e-49	187.00
IUUC-Loc-052725	Lepisosteus oculatus	34.15	1.00e-40	158.00
IUUC-Lma-053234	Leptosphaeria maculans	53.57	1.00e-14	74.30
IUUC-Laf-054057	Loxodonta africana	32.42	8.00e-38	149.00
IUUC-Mcc-055212	Macaca mulatta	69.12	9.00e-30	122.00
IUUC-Meu-056511	Macropus eugenii	31.69	1.00e-32	132.00
IUUC-Mtr-058089	Medicago truncatula	39.34	3.00e-44	171.00
IUUC-Mga-059967	Meleagris gallopavo	32.24	8.00e-37	145.00
IUUC-Mmr-060843	Microcebus murinus	32.81	9.00e-40	155.00
IUUC-Mdo-062282	Monodelphis domestica	34.52	4.00e-42	163.00
IUUC-Mmu-063201	Mus musculus	35.89	3.00e-41	160.00
IUUC-Mac-064625	Musa acuminata	42.29	6.00e-50	189.00
IUUC-Mpu-066302	Mustela putorius furo	34.13	1.00e-40	159.00
IUUC-Mlu-068192	Myotis lucifugus	35.08	6.00e-41	159.00
IUUC-Nle-069062	Nomascus leucogenys	32.03	6.00e-39	153.00
IUUC-Opr-070207	Ochotona princeps	33.74	1.00e-34	139.00
IUUC-Ont-072446	Oreochromis niloticus	33.20	2.00e-39	154.00
IUUC-Oan-073652	Ornithorhynchus anatinus	34.71	1.00e-39	155.00
IUUC-Ocu-073871	Oryctolagus cuniculus	34.54	3.00e-39	154.00
IUUC-Obr-076266	Oryza brachyantha	40.98	2.00e-48	184.00
IUUC-Ogl-077118	Oryza glaberrima	73.13	1.00e-30	125.00
IUUC-Oin-079049	Oryza indica	73.13	1.00e-30	125.00
IUUC-Ome-081291	Oryza meridionalis	73.13	1.00e-30	125.00
IUUC-Oni-082218	Oryza nivara	73.13	1.00e-30	125.00
IUUC-Opu-084171	Oryza punctata	37.66	2.00e-41	162.00
IUUC-Osa-085563	Oryza sativa	73.13	1.00e-30	125.00
IUUC-Ola-087103	Oryzias latipes	33.60	1.00e-40	158.00
IUUC-Olu-087851	Ostreococcus lucimarinus	39.20	7.00e-21	92.80
IUUC-Oga-088066	Otolemur garnettii	40.23	4.00e-34	137.00
IUUC-Oar-089524	Ovis aries	33.07	4.00e-38	150.00
IUUC-Ptr-091665	Pan troglodytes	34.13	4.00e-40	157.00
IUUC-Pan-091875	Papio anubis	34.13	4.00e-40	157.00
IUUC-Psi-093904	Pelodiscus sinensis	34.22	6.00e-36	142.00
IUUC-Pma-094144	Petromyzon marinus	65.22	3.00e-25	106.00
IUUC-Pfo-096981	Poecilia formosa	33.73	1.00e-40	158.00
IUUC-Pab-097978	Pongo abelii	31.95	2.00e-34	137.00
IUUC-Pop-099415	Populus trichocarpa	40.16	1.00e-45	175.00
IUUC-Pca-100600	Procavia capensis	70.59	3.00e-29	120.00
IUUC-Ppe-101441	Prunus persica	41.03	5.00e-51	192.00
IUUC-Pva-102282	Pteropus vampyrus	35.25	2.00e-41	161.00
IUUC-Pte-104284	Pyrenophora teres	55.36	5.00e-15	75.90
IUUC-Pyt-104787	Pyrenophora triticirepentis	55.36	9.00e-15	75.10
IUUC-Rno-105646	Rattus norvegicus	35.89	3.00e-41	160.00
IUUC-Sha-107031	Sarcophilus harrisii	34.30	2.00e-39	154.00
IUUC-Sit-109827	Setaria italica	40.42	7.00e-48	182.00
IUUC-Sly-111750	Solanum lycopersicum	40.34	1.00e-46	178.00
IUUC-Stu-112250	Solanum tuberosum	40.34	1.00e-46	178.00
IUUC-Sar-113193	Sorex araneus	57.65	1.00e-25	110.00
IUUC-Sbi-114826	Sorghum bicolor	39.58	4.00e-48	183.00
IUUC-Sre-115124	Sporisorium reilianum	55.36	9.00e-19	88.20
IUUC-Ssc-115797	Sus scrofa	33.74	8.00e-38	149.00
IUUC-Tgu-116837	Taeniopygia guttata	35.80	7.00e-42	162.00
IUUC-Tru-117974	Takifugu rubripes	33.60	9.00e-39	152.00
IUUC-Tsy-119035	Tarsius syrichta	63.77	3.00e-25	108.00
IUUC-Tni-120024	Tetraodon nigroviridis	34.00	7.00e-38	149.00
IUUC-Tca-121597	Theobroma cacao	75.36	6.00e-32	129.00
IUUC-Tre-121950	Trichoderma reesei	60.34	4.00e-20	92.80
IUUC-Tvi-122341	Trichoderma virens	62.96	2.00e-15	74.30
IUUC-Tae-123043	Triticum aestivum	39.22	3.00e-47	180.00
IUUC-Tbe-127558	Tupaia belangeri	30.59	2.00e-34	138.00
IUUC-Ttr-128300	Tursiops truncatus	69.12	3.00e-29	120.00
IUUC-Uma-129581	Ustilago maydis	55.36	6.00e-19	88.60
IUUC-Vpa-130063	Vicugna pacos	69.64	1.00e-23	102.00
IUUC-Vvi-131487	Vitis vinifera	44.64	3.00e-50	190.00
IUUC-Xtr-132189	Xenopus tropicalis	34.43	3.00e-39	154.00
IUUC-Xma-133297	Xiphophorus maculatus	33.73	8.00e-40	155.00
IUUC-Yli-134326	Yarrowia lipolytica	51.72	9.00e-18	83.20
IUUC-Zma-135298	Zea mays	73.21	9.00e-26	109.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence