iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005494

UUCD1 version

UUC-ArL-01263

Ensembl Protein ID

fgenesh2_kg.1__424__AT1G04860.1

UniProt Accession

D7KE85; D7KE85_ARALL

Genbank Protein ID

EFH68506.1

Protein Name

Ubiquitinyl hydrolase 1

Genbank Nucleotide ID

GL348713

Gene Name

UBP2; ARALYDRAFT_470470

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.1__424__AT1G04860.1	fgenesh2_kg.1__424__AT1G04860.1	fgenesh2_kg.1__424__AT1G04860.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	4.10e-80	270.2	229	922

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkal 77
           Gl NlgNtC++NS++Q L+++  lr+ +l++        n ++   +l++sl+klf+e     + k++++pr ++ ++
   Q: 229  GLVNLGNTCFFNSIMQNLLSLDRLRDHFLKE--------NGSGAGRPLASSLRKLFAETKpeAGLKSVINPRVFFGSF 298
           9*****************************2........22345669************99999************** PP
   S: 78   kkeaeefsgyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqik 155
           +++a++f+gy+q+D++E+l++lld+l++e +        ++             +++++k+++li+ +F+g+++s ++
   Q: 299  CSKAPQFRGYDQHDSHELLRCLLDALSTEESA-----LRKK----------RGISDNDEKSTTLIDSVFGGETSSIVR 361
           *****************************922.....2222..........23346789999**************** PP
   S: 156  clecdnvssreepfldlslpvpgkeetkke................................................ 185
           c ec+++s+ +epfldlslpvp k++  k+                                                
   Q: 362  CMECGHSSKVYEPFLDLSLPVPFKKSPPKKlqpvsrarkaklppkrvpknvskvskvsnvlpskalselnspgkalvv 439
           ***********************99886669*********************************************** PP
   S: 186  .............................................................................. 185
                                                                                         
   Q: 440  iadsdtscssfapldngpvletlsvltadnkqasesvtqsdtgfdsfwldiigpensgdetnldmqedgtdnvstteg 517
           ****************************************************************************** PP
   S: 186  .............................................................................. 185
                                                                                         
   Q: 518  dqslecnterlmqdnvqamqsdegpvtsgisaefiqasciscdpgigessssvnpwdeeelplvvgdsqilympynei 595
           ****************************************************************************** PP
   S: 186  .............................................................................. 185
                                                                                         
   Q: 596  scndksvaegefeasssfgtgdhepqnsdfvdfgglfdepettegpvfgppskaeasgvgimafssesdpeeiddsds 673
           ****************************************************************************** PP
   S: 186  ..slqdcLesftkeeelegenkyycekck................................................. 212
             s++ cL++ftk+e l ++n+++ce+c                                                  
   Q: 674  pvSVERCLAHFTKPEILSDDNAWHCENCSknlklqrlrekqkskkdesrssntsngwvkenesegfgetdilavkqdp 751
           *****************************9999999999999999999999999999999999999999999999999 PP
   S: 213  ..........................................kkqeaekklklkklPevLilhLkRfsfseeqksrek 248
                                                      k++a+k++ ++k P+vL++hLkRfs + + ++ +k
   Q: 752  ndtccvkdhssngrkatrshsadeseskgtqdededsekvitVKRDASKRVLINKAPPVLTIHLKRFSQDLR-GRLSK 828
           9999999999999999999999999999988888888888887788*********************98887.8889* PP
   S: 249  inkkvefpleLdlspfctspeekqkekkkYeLiavvvHsGslssGHYvayvkn......ekgk.....WllfdDskVt 315
           +n +v f + +dl +++ ++ +++ ++  Y+L + v HsG++++GHYvayv+       +  +     W++++D +V+
   Q: 829  LNGHVAFQEVIDLGQYMDTRFSGE-DPPVYRLAGLVEHSGTMRGGHYVAYVRGgqrvkeS--DssstvWYNVSDAHVR 903
           ********99*******9988776.5***************************7776541..145678********** PP
   S: 316  evkeeevleetgstaYvlfYkr 337
           +v+ e+vl    s+aY+lfY+r
   Q: 904  QVSLEKVLH---SEAYILFYER 922
           *********...********98 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGKKAKKKAR APTKEIQTTE ISMKVSEEPP SQAGEIAEGD VKPVKETQAC VHFDKGLNLE 60
KVLDKIKSSR QIKCEECKEG LSGKRGTKAK GNKGKKDFSS SDKKAIWLCL ECGCYVCGGV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACTAGCCCC TTTGTCTGCC CCTCTTTCGG AGCGATTATT TCACATTGTT TCGTCGGACT 60
CTCTGTCTCC TCCTTTTGAC GGCGGCAGAA ACAACGAAGC ACGCACTGAT AACACCTATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

SMART

SM00290--ZnF_UBP

Gene Ontology

GO:0009507--C:chloroplast
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

aly:ARALYDRAFT_470470

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000997	Aegilops tauschii	28.82	4.00e-60	226.00
IUUC-Atr-003015	Amborella trichopoda	33.04	4.00e-82	299.00
IUUC-Ath-007211	Arabidopsis thaliana	85.46	0.00e+00	1519.00
IUUC-Bdi-014465	Brachypodium distachyon	31.52	2.00e-60	226.00
IUUC-Bol-015853	Brassica oleracea	72.21	0.00e+00	1032.00
IUUC-Bra-017226	Brassica rapa	67.36	0.00e+00	1063.00
IUUC-Csv-026075	Ciona savignyi	36.42	1.00e-20	94.40
IUUC-Cme-027348	Cyanidioschyzon merolae	39.55	2.00e-19	90.50
IUUC-Dor-030443	Dipodomys ordii	42.76	2.00e-26	114.00
IUUC-Ete-032807	Echinops telfairi	42.00	1.00e-26	114.00
IUUC-Eeu-034835	Erinaceus europaeus	42.76	9.00e-27	114.00
IUUC-Gma-044402	Glycine max	44.62	0.00e+00	671.00
IUUC-Meu-056256	Macropus eugenii	38.41	1.00e-22	100.00
IUUC-Mtr-057945	Medicago truncatula	55.62	2.00e-97	349.00
IUUC-Mac-064941	Musa acuminata	32.18	6.00e-74	271.00
IUUC-Ppa-095622	Physcomitrella patens	59.44	2.00e-46	180.00
IUUC-Pop-099136	Populus trichocarpa	46.73	0.00e+00	718.00
IUUC-Pca-101069	Procavia capensis	41.33	1.00e-27	117.00
IUUC-Ppe-101794	Prunus persica	46.50	5.00e-130	458.00
IUUC-Pva-103092	Pteropus vampyrus	42.76	1.00e-26	114.00
IUUC-Spo-108149	Schizosaccharomyces pombe	34.90	6.00e-20	92.40
IUUC-Smo-108942	Selaginella moellendorffii	47.28	2.00e-41	162.00
IUUC-Sit-110283	Setaria italica	31.50	6.00e-62	232.00
IUUC-Sly-111491	Solanum lycopersicum	52.60	2.00e-104	373.00
IUUC-Stu-112820	Solanum tuberosum	41.61	5.00e-180	624.00
IUUC-Sbi-113785	Sorghum bicolor	30.70	2.00e-54	206.00
IUUC-Tca-121701	Theobroma cacao	48.85	6.00e-162	564.00
IUUC-Vvi-131230	Vitis vinifera	70.97	3.00e-21	92.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence