iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-132476

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ligand of numb-protein X 1, E3 ubiquitin protein ligase

Genbank Nucleotide ID

AAMC01036188

Gene Name

lnx1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000011680.3	ENSXETT00000025540.2	ENSXETP00000025540.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	63.19	0.00e+00	852.00	IUUC-Hsa-046470
E3 activity/RING/RING	63.11	0.00e+00	843.00	IUUC-Mmu-063364

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MESNDAIEEL DNEKPQSLCT VCGQLHSEEE NHSYTYTEEV DDDLLCNICL HALIQPLDTP 60
CGHTYCTLCL TSFLVHEDFC PVDRKHILLQ TCKKSTILVK NLLDKLPVIC PFKEHCTDIV 120

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Nucleotide Sequence
(Fasta)

ATGGAGTCAA ATGATGCAAT TGAAGAACTG GACAATGAAA AACCCCAATC ACTGTGTACT 60
GTATGTGGTC AACTGCATTC AGAAGAGGAG AACCATTCTT ATACATACAC TGAGGAAGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001478--PDZ
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50106--PDZ
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00595--PDZ
PF00097--zf-C3HC4

SMART

SM00228--PDZ
SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002005	Ailuropoda melanoleuca	60.97	0.00e+00	814.00
IUUC-Apl-003561	Anas platyrhynchos	66.02	0.00e+00	877.00
IUUC-Aca-005346	Anolis carolinensis	63.26	0.00e+00	862.00
IUUC-Afl-008741	Aspergillus flavus	33.33	2.00e-08	52.00
IUUC-Bta-012970	Bos taurus	63.03	0.00e+00	855.00
IUUC-Cja-019412	Callithrix jacchus	63.51	0.00e+00	839.00
IUUC-Cfa-020735	Canis familiaris	62.11	0.00e+00	868.00
IUUC-Cpo-022198	Cavia porcellus	59.01	0.00e+00	774.00
IUUC-Dre-028841	Danio rerio	50.37	4.00e-22	97.10
IUUC-Dno-028889	Dasypus novemcinctus	63.31	0.00e+00	873.00
IUUC-Dor-030810	Dipodomys ordii	56.67	1.00e-178	620.00
IUUC-Dse-031172	Dothistroma septosporum	39.58	7.00e-08	51.20
IUUC-Fca-036264	Felis catus	63.00	0.00e+00	827.00
IUUC-Fal-037198	Ficedula albicollis	66.76	0.00e+00	928.00
IUUC-Gga-040766	Gallus gallus	61.28	0.00e+00	879.00
IUUC-Ggo-045057	Gorilla gorilla	63.60	0.00e+00	851.00
IUUC-Hsa-046470	Homo sapiens	63.60	0.00e+00	867.00
IUUC-Itr-048393	Ictidomys tridecemlineatus	63.39	0.00e+00	864.00
IUUC-Lch-050081	Latimeria chalumnae	62.26	0.00e+00	875.00
IUUC-Loc-052884	Lepisosteus oculatus	57.69	0.00e+00	815.00
IUUC-Laf-054498	Loxodonta africana	62.40	0.00e+00	870.00
IUUC-Meu-056401	Macropus eugenii	52.56	5.00e-127	447.00
IUUC-Mla-059113	Melampsora laricipopulina	33.33	9.00e-10	58.20
IUUC-Mga-059504	Meleagris gallopavo	64.23	0.00e+00	897.00
IUUC-Mmr-060696	Microcebus murinus	46.90	2.00e-161	561.00
IUUC-Mdo-062731	Monodelphis domestica	65.38	0.00e+00	909.00
IUUC-Mmu-063364	Mus musculus	63.52	0.00e+00	858.00
IUUC-Mpu-066626	Mustela putorius furo	62.24	0.00e+00	850.00
IUUC-Mlu-068207	Myotis lucifugus	62.17	0.00e+00	835.00
IUUC-Nle-069304	Nomascus leucogenys	63.46	0.00e+00	865.00
IUUC-Opr-071080	Ochotona princeps	54.67	0.00e+00	751.00
IUUC-Ont-072002	Oreochromis niloticus	54.08	0.00e+00	730.00
IUUC-Ola-086477	Oryzias latipes	53.81	0.00e+00	754.00
IUUC-Oga-089142	Otolemur garnettii	61.91	0.00e+00	838.00
IUUC-Oar-090359	Ovis aries	62.45	0.00e+00	852.00
IUUC-Ptr-090797	Pan troglodytes	63.32	0.00e+00	862.00
IUUC-Pan-091910	Papio anubis	63.05	0.00e+00	858.00
IUUC-Psi-093386	Pelodiscus sinensis	67.57	0.00e+00	916.00
IUUC-Pfo-096370	Poecilia formosa	53.42	0.00e+00	724.00
IUUC-Pab-097761	Pongo abelii	61.92	0.00e+00	645.00
IUUC-Pva-102443	Pteropus vampyrus	62.03	0.00e+00	676.00
IUUC-Rno-106030	Rattus norvegicus	62.84	0.00e+00	843.00
IUUC-Sha-107609	Sarcophilus harrisii	64.92	0.00e+00	903.00
IUUC-Sar-113333	Sorex araneus	60.95	0.00e+00	825.00
IUUC-Ssc-116222	Sus scrofa	57.07	0.00e+00	774.00
IUUC-Tgu-117019	Taeniopygia guttata	65.66	0.00e+00	906.00
IUUC-Tru-118481	Takifugu rubripes	54.50	0.00e+00	761.00
IUUC-Tni-119796	Tetraodon nigroviridis	51.81	4.00e-132	464.00
IUUC-Tbe-127538	Tupaia belangeri	61.29	0.00e+00	842.00
IUUC-Ttr-128787	Tursiops truncatus	61.37	0.00e+00	815.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence