iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Eca-033443

UUCD1 version

UUC-EqC-00038

Ensembl Protein ID

ENSECAP00000022429.1

UniProt Accession

F6PYI6; F6PYI6_HORSE

Protein Name

Uncharacterized protein

Gene Name

RNF4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSECAG00000024877.1	ENSECAT00000026839.1	ENSECAP00000022429.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.40e-09	35.8	132	177

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf......kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC++ +       +  +++ CgHvf+ +Cl       +s +++ +CP+Cr
   Q: 132  CPICMDGYseivqnGRLIVSTECGHVFCSQCL------RDSLKNANTCPTCR 177
           ********55553322255788*********9......4559*********8 PP

Organism

Equus caballus

Protein Sequence
(Fasta)

MSTRKRRGGT VNSRQAQKRT REAASTPEMA LEAEPIELVE SAGDEIVDLT CESLEPVVVD 60
LTHNDSVVIV DERRRPRRNA RRLRQDHADS CVVSSDDEEL SRDRDVYVTT HTPRNTREEA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCAGGGCTT GAAGATACTG GAAATCTGTT TGGCTCCAAA TTCCTGTGCT AGCCAGAGGA 60
TGAGTAGCCA GTGGGCATGA GCAGTTGAGA ACATTGGACT TCTCTGCAAA CCTTGGTACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0016605--C:PML body
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0016567--P:protein ubiquitination
GO:0090234--P:regulation of kinetochore assembly
GO:0090169--P:regulation of spindle assembly
GO:0046685--P:response to arsenic-containing substance

KEGG

ecb:100051309

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000620	Aegilops tauschii	39.34	1.00e-10	59.70
IUUC-Aml-002206	Ailuropoda melanoleuca	98.93	4.00e-89	320.00
IUUC-Atr-002771	Amborella trichopoda	32.88	2.00e-09	55.80
IUUC-Apl-004120	Anas platyrhynchos	72.96	2.00e-73	268.00
IUUC-Aca-004236	Anolis carolinensis	63.16	3.00e-61	227.00
IUUC-Ame-011555	Astyanax mexicanus	51.55	4.00e-37	147.00
IUUC-Bta-012913	Bos taurus	89.47	3.00e-88	317.00
IUUC-Bdi-014655	Brachypodium distachyon	42.62	1.00e-10	60.10
IUUC-Bol-016418	Brassica oleracea	37.70	5.00e-09	55.10
IUUC-Bra-016890	Brassica rapa	36.84	8.00e-08	50.10
IUUC-Cja-019151	Callithrix jacchus	93.19	3.00e-85	306.00
IUUC-Cfa-020868	Canis familiaris	95.79	1.00e-85	308.00
IUUC-Cpo-022249	Cavia porcellus	87.17	6.00e-74	269.00
IUUC-Csa-024125	Chlorocebus sabaeus	94.21	2.00e-87	314.00
IUUC-Cin-025749	Ciona intestinalis	40.98	1.00e-13	69.70
IUUC-Csv-026318	Ciona savignyi	36.99	5.00e-13	67.40
IUUC-Dre-028145	Danio rerio	42.05	7.00e-33	133.00
IUUC-Dno-029605	Dasypus novemcinctus	93.16	4.00e-94	336.00
IUUC-Dor-030898	Dipodomys ordii	91.05	1.00e-88	318.00
IUUC-Dme-032177	Drosophila melanogaster	42.37	1.00e-10	60.50
IUUC-Ete-032694	Echinops telfairi	86.10	6.00e-73	266.00
IUUC-Eeu-034603	Erinaceus europaeus	95.15	3.00e-56	209.00
IUUC-Fca-035507	Felis catus	95.72	6.00e-84	302.00
IUUC-Fal-037382	Ficedula albicollis	71.94	4.00e-66	243.00
IUUC-Gmo-038960	Gadus morhua	71.43	5.00e-19	85.90
IUUC-Gga-040493	Gallus gallus	69.59	3.00e-69	253.00
IUUC-Gac-042194	Gasterosteus aculeatus	47.50	1.00e-35	142.00
IUUC-Ggo-044726	Gorilla gorilla	94.74	2.00e-87	314.00
IUUC-Hsa-046212	Homo sapiens	94.74	2.00e-87	314.00
IUUC-Hvu-047337	Hordeum vulgare	37.70	2.00e-10	59.70
IUUC-Itr-047892	Ictidomys tridecemlineatus	95.19	7.00e-85	305.00
IUUC-Lpe-050920	Leersia perrieri	34.18	1.00e-10	59.70
IUUC-Loc-051907	Lepisosteus oculatus	47.59	1.00e-36	145.00
IUUC-Laf-054145	Loxodonta africana	93.05	2.00e-82	297.00
IUUC-Mcc-055689	Macaca mulatta	94.74	2.00e-87	314.00
IUUC-Meu-056654	Macropus eugenii	48.13	1.00e-41	162.00
IUUC-Mtr-058314	Medicago truncatula	45.45	1.00e-10	58.90
IUUC-Mga-059303	Meleagris gallopavo	71.43	1.00e-72	265.00
IUUC-Mmr-061355	Microcebus murinus	94.74	8.00e-87	312.00
IUUC-Mdo-062968	Monodelphis domestica	67.72	4.00e-68	250.00
IUUC-Mmu-064421	Mus musculus	90.91	1.00e-91	328.00
IUUC-Mac-064573	Musa acuminata	31.68	5.00e-12	65.10
IUUC-Mpu-066522	Mustela putorius furo	98.93	4.00e-89	320.00
IUUC-Mlu-067065	Myotis lucifugus	91.44	1.00e-82	298.00
IUUC-Nle-069198	Nomascus leucogenys	93.16	5.00e-86	309.00
IUUC-Opr-071141	Ochotona princeps	88.24	1.00e-86	311.00
IUUC-Oan-073341	Ornithorhynchus anatinus	68.03	2.00e-36	144.00
IUUC-Ocu-073787	Oryctolagus cuniculus	94.12	4.00e-94	336.00
IUUC-Oba-075460	Oryza barthii	40.32	4.00e-11	61.60
IUUC-Obr-076349	Oryza brachyantha	37.70	8.00e-10	57.40
IUUC-Ogl-077094	Oryza glaberrima	36.71	3.00e-12	65.10
IUUC-Ogu-078677	Oryza glumaepatula	40.32	4.00e-11	61.60
IUUC-Oin-079992	Oryza indica	36.71	3.00e-12	65.10
IUUC-Olo-080257	Oryza longistaminata	41.94	3.00e-11	62.00
IUUC-Ome-081943	Oryza meridionalis	36.71	3.00e-12	65.50
IUUC-Oni-082671	Oryza nivara	40.32	4.00e-11	61.60
IUUC-Opu-083644	Oryza punctata	40.32	6.00e-11	60.80
IUUC-Oru-084650	Oryza rufipogon	40.32	4.00e-11	61.60
IUUC-Osa-086110	Oryza sativa	36.71	3.00e-12	65.10
IUUC-Ola-086970	Oryzias latipes	43.37	1.00e-34	139.00
IUUC-Olu-087634	Ostreococcus lucimarinus	37.29	2.00e-10	58.20
IUUC-Oga-088242	Otolemur garnettii	94.65	2.00e-94	337.00
IUUC-Oar-089469	Ovis aries	90.91	4.00e-92	329.00
IUUC-Ptr-091254	Pan troglodytes	88.95	4.00e-80	290.00
IUUC-Pan-092776	Papio anubis	94.74	2.00e-87	314.00
IUUC-Psi-093929	Pelodiscus sinensis	70.56	1.00e-68	251.00
IUUC-Pma-094118	Petromyzon marinus	55.38	2.00e-20	89.70
IUUC-Ppa-095567	Physcomitrella patens	44.26	2.00e-11	62.40
IUUC-Pfo-097412	Poecilia formosa	47.83	3.00e-34	137.00
IUUC-Pab-098424	Pongo abelii	94.21	5.00e-87	312.00
IUUC-Pop-099483	Populus trichocarpa	37.10	6.00e-09	53.90
IUUC-Pca-100463	Procavia capensis	89.36	1.00e-52	198.00
IUUC-Ppe-101755	Prunus persica	38.71	2.00e-09	54.70
IUUC-Pva-102594	Pteropus vampyrus	95.74	2.00e-65	240.00
IUUC-Rno-105460	Rattus norvegicus	88.89	3.00e-80	290.00
IUUC-Sha-107487	Sarcophilus harrisii	71.96	4.00e-69	253.00
IUUC-Sit-109959	Setaria italica	36.07	3.00e-05	42.40
IUUC-Stu-112694	Solanum tuberosum	39.06	3.00e-09	54.70
IUUC-Sar-113601	Sorex araneus	90.91	1.00e-80	291.00
IUUC-Sbi-114398	Sorghum bicolor	36.07	9.00e-05	40.40
IUUC-Ssc-115911	Sus scrofa	96.84	3.00e-88	317.00
IUUC-Tgu-117264	Taeniopygia guttata	71.96	2.00e-63	234.00
IUUC-Tru-117663	Takifugu rubripes	49.06	3.00e-36	144.00
IUUC-Tsy-118883	Tarsius syrichta	87.84	7.00e-67	245.00
IUUC-Tae-123990	Triticum aestivum	37.10	2.00e-06	45.80
IUUC-Tur-126408	Triticum urartu	39.34	1.00e-10	59.70
IUUC-Ttr-128950	Tursiops truncatus	67.89	5.00e-68	250.00
IUUC-Vvi-130833	Vitis vinifera	40.32	4.00e-10	58.20
IUUC-Xtr-132879	Xenopus tropicalis	60.39	2.00e-39	154.00
IUUC-Xma-133319	Xiphophorus maculatus	45.58	5.00e-31	126.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence