iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-028522

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING finger and transmembrane domain-containing protein 1

Genbank Nucleotide ID

BC066378

Gene Name

rnft1; zgc:77306

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000015917.7	ENSDART00000022484.6	ENSDARP00000013898.6

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.60e-10	42.2	359	397

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+ dfk+ p+vl C+H+f+++C+ +w       ++e +CPlCr
   Q: 359  CPICQADFKQ-PRVLVCQHIFCEECIAQW------LNQERTCPLCR 397
           ********99.******************......**********8 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MKLRAQFDRG TYSESKGSFK LRDSLDPMQP EPSSREGNGL SLTLQPELLA RMPGAGSSSG 60
TETGEDVRVP MGSSSGSTNG RGATSRRMRT ASHSHSHTHG HGHSHEHESD SGESDLESGE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGTCAGATT AGCAGATAGC TCCCGGAACA ATGTCAGACT GAAACTAAAC TCAGCCGATG 60
AGCTGTTTTG CTTATTATAT ATTTAATTTT ATGTTGTTTT GGTCTTCAAA CGGCACTACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

dre:406509

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001586	Ailuropoda melanoleuca	56.85	6.00e-89	321.00
IUUC-Apl-003875	Anas platyrhynchos	58.76	1.00e-87	317.00
IUUC-Aca-004325	Anolis carolinensis	47.51	7.00e-78	284.00
IUUC-Ame-010748	Astyanax mexicanus	61.03	3.00e-118	418.00
IUUC-Bta-013167	Bos taurus	58.56	3.00e-92	332.00
IUUC-Cja-019669	Callithrix jacchus	58.90	8.00e-93	333.00
IUUC-Cfa-020610	Canis familiaris	57.19	8.00e-90	323.00
IUUC-Cpo-021979	Cavia porcellus	58.76	2.00e-86	313.00
IUUC-Cre-022592	Chlamydomonas reinhardtii	43.55	1.00e-11	64.70
IUUC-Csa-023752	Chlorocebus sabaeus	58.22	4.00e-92	332.00
IUUC-Cho-024880	Choloepus hoffmanni	52.92	3.00e-78	285.00
IUUC-Dno-029312	Dasypus novemcinctus	57.53	4.00e-89	321.00
IUUC-Dor-030524	Dipodomys ordii	46.94	4.00e-53	201.00
IUUC-Ete-032456	Echinops telfairi	50.34	3.00e-76	278.00
IUUC-Eeu-034649	Erinaceus europaeus	61.63	1.00e-23	103.00
IUUC-Fca-036321	Felis catus	55.97	5.00e-88	318.00
IUUC-Fal-036873	Ficedula albicollis	53.74	4.00e-88	318.00
IUUC-Gmo-038501	Gadus morhua	56.91	3.00e-94	338.00
IUUC-Gga-040583	Gallus gallus	56.85	2.00e-85	309.00
IUUC-Gac-042530	Gasterosteus aculeatus	54.80	1.00e-99	356.00
IUUC-Ggo-045577	Gorilla gorilla	56.66	9.00e-89	320.00
IUUC-Hsa-046395	Homo sapiens	57.88	1.00e-91	330.00
IUUC-Itr-048888	Ictidomys tridecemlineatus	57.88	2.00e-91	329.00
IUUC-Lch-049516	Latimeria chalumnae	54.39	5.00e-102	364.00
IUUC-Loc-052692	Lepisosteus oculatus	59.19	3.00e-111	395.00
IUUC-Laf-054478	Loxodonta africana	57.88	6.00e-90	324.00
IUUC-Meu-056056	Macropus eugenii	59.09	4.00e-79	288.00
IUUC-Mga-059908	Meleagris gallopavo	58.50	6.00e-73	267.00
IUUC-Mdo-063071	Monodelphis domestica	59.04	5.00e-90	324.00
IUUC-Mmu-063446	Mus musculus	57.73	1.00e-88	319.00
IUUC-Mpu-065810	Mustela putorius furo	54.86	2.00e-70	259.00
IUUC-Nle-069009	Nomascus leucogenys	58.22	3.00e-93	335.00
IUUC-Ont-071863	Oreochromis niloticus	59.58	1.00e-100	359.00
IUUC-Oan-073490	Ornithorhynchus anatinus	59.25	9.00e-96	343.00
IUUC-Ocu-074346	Oryctolagus cuniculus	59.45	3.00e-92	332.00
IUUC-Ola-086809	Oryzias latipes	55.25	3.00e-91	328.00
IUUC-Oga-087950	Otolemur garnettii	58.08	4.00e-90	325.00
IUUC-Oar-089816	Ovis aries	58.56	4.00e-92	331.00
IUUC-Ptr-090736	Pan troglodytes	57.88	1.00e-91	330.00
IUUC-Psi-093766	Pelodiscus sinensis	59.93	5.00e-90	324.00
IUUC-Pfo-097090	Poecilia formosa	53.46	1.00e-94	340.00
IUUC-Pab-098474	Pongo abelii	58.56	2.00e-92	332.00
IUUC-Rno-105126	Rattus norvegicus	57.39	2.00e-89	323.00
IUUC-Sha-107537	Sarcophilus harrisii	59.73	5.00e-92	331.00
IUUC-Tgu-117409	Taeniopygia guttata	58.56	3.00e-90	325.00
IUUC-Tru-117926	Takifugu rubripes	55.87	5.00e-96	344.00
IUUC-Tsy-118995	Tarsius syrichta	57.04	1.00e-89	323.00
IUUC-Tni-120361	Tetraodon nigroviridis	53.73	5.00e-99	354.00
IUUC-Tbe-128158	Tupaia belangeri	42.61	2.00e-49	190.00
IUUC-Ttr-128496	Tursiops truncatus	57.19	2.00e-88	319.00
IUUC-Vpa-130045	Vicugna pacos	43.70	2.00e-50	193.00
IUUC-Xtr-132923	Xenopus tropicalis	44.24	7.00e-77	281.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence