iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ggo-045426

UUCD1 version

UUC-GoG-00651

Ensembl Protein ID

ENSGGOP00000016328.2

UniProt Accession

G3RKQ1; G3RKQ1_GORGO

Protein Name

Uncharacterized protein

Gene Name

RNF40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGGOG00000016728.2	ENSGGOT00000016792.2	ENSGGOP00000016328.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	30.03	2.00e-30	132.00	IUUC-Ath-007462
E3 activity/RING/RING	42.75	0.00e+00	699.00	IUUC-Dme-032034
E3 activity/RING/RING	99.50	0.00e+00	1772.00	IUUC-Hsa-045732
E3 activity/RING/RING	92.71	0.00e+00	1634.00	IUUC-Rno-105165
E3 activity/RING/RING	24.25	2.00e-15	79.70	IUUC-Sce-106384

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Gorilla gorilla

Protein Sequence
(Fasta)

MSGPGNKRAA GDGGSGPPEK KLSREEKTTT TLIEPIRLGG ISSTEEMDLK VLQFKNKKLA 60
ERLEQRQACE DELRERIEKL EKRQATDDAT LLIVNRYWAQ LDETVEALLR CHESQGELSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTGACGTCC GGTGAAATTC AAGATGGCGG CGCTAGGCTG ACCCTGCTGC TGGTGAGGGC 60
TCTGGCGCCG GGGGGGACGG GATCCAGCAG GTGTGTGCAG GGTGGAGGGT GTTTGGGGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0033503--C:HULC complex
GO:0016020--C:membrane
GO:0005654--C:nucleoplasm
GO:0003730--F:mRNA 3'-UTR binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0033523--P:histone H2B ubiquitination
GO:0010390--P:histone monoubiquitination
GO:1900364--P:negative regulation of mRNA polyadenylation
GO:2001168--P:positive regulation of histone H2B ubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001027	Aegilops tauschii	29.24	1.00e-12	68.20
IUUC-Aml-002295	Ailuropoda melanoleuca	96.90	0.00e+00	1716.00
IUUC-Atr-002836	Amborella trichopoda	31.12	7.00e-27	115.00
IUUC-Aca-004850	Anolis carolinensis	76.32	0.00e+00	681.00
IUUC-Aly-006055	Arabidopsis lyrata	27.90	9.00e-30	125.00
IUUC-Ath-007462	Arabidopsis thaliana	29.21	9.00e-30	125.00
IUUC-Ang-009601	Aspergillus niger	26.57	1.00e-16	82.00
IUUC-Ame-011745	Astyanax mexicanus	81.79	2.00e-152	533.00
IUUC-Bgr-012245	Blumeria graminis	23.91	4.00e-10	60.10
IUUC-Bta-013173	Bos taurus	95.70	0.00e+00	1690.00
IUUC-Bci-013926	Botrytis cinerea	37.74	4.00e-08	53.50
IUUC-Bdi-014799	Brachypodium distachyon	29.20	9.00e-32	132.00
IUUC-Bol-015421	Brassica oleracea	29.20	2.00e-28	121.00
IUUC-Bra-016804	Brassica rapa	29.32	8.00e-35	142.00
IUUC-Cja-019042	Callithrix jacchus	96.80	0.00e+00	1688.00
IUUC-Cfa-020318	Canis familiaris	96.60	0.00e+00	1711.00
IUUC-Cpo-021539	Cavia porcellus	95.20	0.00e+00	1693.00
IUUC-Cre-022940	Chlamydomonas reinhardtii	37.93	9.00e-09	55.50
IUUC-Csa-024051	Chlorocebus sabaeus	98.50	0.00e+00	1671.00
IUUC-Cin-025174	Ciona intestinalis	62.28	5.00e-109	389.00
IUUC-Csv-025830	Ciona savignyi	54.79	5.00e-97	348.00
IUUC-Cgl-026569	Colletotrichum gloeosporioides	40.38	2.00e-09	58.20
IUUC-Cne-026878	Cryptococcus neoformans	26.57	9.00e-16	79.00
IUUC-Dre-028171	Danio rerio	80.95	1.00e-153	536.00
IUUC-Dno-028892	Dasypus novemcinctus	95.40	0.00e+00	1648.00
IUUC-Dor-030268	Dipodomys ordii	93.28	0.00e+00	776.00
IUUC-Dme-032034	Drosophila melanogaster	42.73	0.00e+00	713.00
IUUC-Ete-032505	Echinops telfairi	91.88	0.00e+00	640.00
IUUC-Eca-033436	Equus caballus	96.90	0.00e+00	1746.00
IUUC-Eeu-035291	Erinaceus europaeus	90.23	0.00e+00	1297.00
IUUC-Fca-035720	Felis catus	96.10	0.00e+00	1709.00
IUUC-Fox-038017	Fusarium oxysporum	27.39	2.00e-10	61.20
IUUC-Fso-038414	Fusarium solani	25.91	3.00e-10	60.50
IUUC-Gmo-039269	Gadus morhua	80.41	2.00e-143	503.00
IUUC-Gac-041303	Gasterosteus aculeatus	64.55	2.00e-151	530.00
IUUC-Gma-042797	Glycine max	27.82	2.00e-36	147.00
IUUC-Hsa-045732	Homo sapiens	99.50	0.00e+00	1807.00
IUUC-Hvu-047689	Hordeum vulgare	28.37	3.00e-28	120.00
IUUC-Itr-048724	Ictidomys tridecemlineatus	96.40	0.00e+00	1694.00
IUUC-Kpa-049345	Komagataella pastoris	28.74	1.00e-10	61.60
IUUC-Lch-049429	Latimeria chalumnae	84.75	3.00e-162	565.00
IUUC-Lpe-051253	Leersia perrieri	31.86	2.00e-34	141.00
IUUC-Laf-054267	Loxodonta africana	95.70	0.00e+00	1699.00
IUUC-Mcc-055240	Macaca mulatta	98.50	0.00e+00	1674.00
IUUC-Meu-056750	Macropus eugenii	83.71	0.00e+00	1417.00
IUUC-Mor-057068	Magnaporthe oryzae	43.40	5.00e-12	66.60
IUUC-Mtr-057632	Medicago truncatula	28.57	4.00e-33	136.00
IUUC-Mla-059072	Melampsora laricipopulina	28.10	1.00e-26	115.00
IUUC-Mvi-060341	Microbotryum violaceum	29.59	5.00e-23	103.00
IUUC-Mmr-061177	Microcebus murinus	96.70	0.00e+00	1711.00
IUUC-Mdo-062415	Monodelphis domestica	83.93	0.00e+00	1437.00
IUUC-Mmu-063981	Mus musculus	92.71	0.00e+00	1655.00
IUUC-Mac-065103	Musa acuminata	31.13	8.00e-43	169.00
IUUC-Mpu-066498	Mustela putorius furo	95.40	0.00e+00	1627.00
IUUC-Mlu-067242	Myotis lucifugus	94.81	0.00e+00	1675.00
IUUC-Nle-069320	Nomascus leucogenys	98.70	0.00e+00	882.00
IUUC-Opr-070286	Ochotona princeps	92.45	0.00e+00	1034.00
IUUC-Ont-071299	Oreochromis niloticus	80.56	2.00e-154	540.00
IUUC-Oan-073538	Ornithorhynchus anatinus	77.48	0.00e+00	632.00
IUUC-Ocu-073799	Oryctolagus cuniculus	96.00	0.00e+00	1699.00
IUUC-Oba-075000	Oryza barthii	28.47	2.00e-30	127.00
IUUC-Obr-076532	Oryza brachyantha	29.90	4.00e-33	136.00
IUUC-Ogl-077200	Oryza glaberrima	30.15	6.00e-33	136.00
IUUC-Ogu-078279	Oryza glumaepatula	28.47	2.00e-30	127.00
IUUC-Oin-079097	Oryza indica	30.15	6.00e-33	136.00
IUUC-Olo-080612	Oryza longistaminata	53.33	4.00e-15	77.40
IUUC-Ome-081304	Oryza meridionalis	29.77	1.00e-31	131.00
IUUC-Oni-082162	Oryza nivara	28.47	2.00e-30	127.00
IUUC-Opu-083683	Oryza punctata	50.00	3.00e-16	80.50
IUUC-Oru-084382	Oryza rufipogon	28.47	2.00e-30	127.00
IUUC-Osa-085839	Oryza sativa	50.00	4.00e-16	80.10
IUUC-Ola-086435	Oryzias latipes	68.95	5.00e-157	548.00
IUUC-Oga-089016	Otolemur garnettii	90.17	0.00e+00	1577.00
IUUC-Oar-089589	Ovis aries	96.00	0.00e+00	1701.00
IUUC-Ptr-090530	Pan troglodytes	99.64	0.00e+00	1381.00
IUUC-Pan-092502	Papio anubis	98.50	0.00e+00	1675.00
IUUC-Psi-093155	Pelodiscus sinensis	72.20	2.00e-142	499.00
IUUC-Pno-095079	Phaeosphaeria nodorum	27.06	1.00e-13	71.20
IUUC-Ppa-095735	Physcomitrella patens	33.88	2.00e-42	167.00
IUUC-Pfo-097527	Poecilia formosa	53.25	0.00e+00	758.00
IUUC-Pab-098619	Pongo abelii	99.00	0.00e+00	1759.00
IUUC-Pop-099376	Populus trichocarpa	29.71	8.00e-36	145.00
IUUC-Pca-100544	Procavia capensis	94.71	0.00e+00	1682.00
IUUC-Ppe-102065	Prunus persica	29.39	2.00e-31	131.00
IUUC-Pva-102479	Pteropus vampyrus	96.59	0.00e+00	1410.00
IUUC-Pgr-103536	Puccinia graminis	27.14	7.00e-22	99.40
IUUC-Ptt-104014	Puccinia triticina	26.98	3.00e-05	43.90
IUUC-Pte-104415	Pyrenophora teres	32.43	3.00e-13	70.90
IUUC-Pyt-104762	Pyrenophora triticirepentis	29.90	2.00e-13	71.20
IUUC-Rno-105165	Rattus norvegicus	92.71	0.00e+00	1632.00
IUUC-Sce-106384	Saccharomyces cerevisiae	24.25	4.00e-16	80.10
IUUC-Sha-107602	Sarcophilus harrisii	85.63	0.00e+00	1472.00
IUUC-Ssl-108546	Sclerotinia sclerotiorum	37.74	2.00e-08	54.70
IUUC-Smo-109550	Selaginella moellendorffii	29.92	8.00e-39	155.00
IUUC-Sit-109889	Setaria italica	29.81	4.00e-32	133.00
IUUC-Sly-111490	Solanum lycopersicum	32.74	7.00e-42	166.00
IUUC-Sar-113755	Sorex araneus	93.27	0.00e+00	1338.00
IUUC-Sbi-114734	Sorghum bicolor	31.33	4.00e-24	104.00
IUUC-Sre-115087	Sporisorium reilianum	24.91	3.00e-16	80.90
IUUC-Ssc-116134	Sus scrofa	94.91	0.00e+00	1704.00
IUUC-Tru-117867	Takifugu rubripes	80.56	3.00e-154	539.00
IUUC-Tsy-119065	Tarsius syrichta	91.84	0.00e+00	1476.00
IUUC-Tni-120790	Tetraodon nigroviridis	54.06	0.00e+00	812.00
IUUC-Tca-121060	Theobroma cacao	32.78	8.00e-40	159.00
IUUC-Tre-122150	Trichoderma reesei	39.62	3.00e-10	60.50
IUUC-Tvi-122431	Trichoderma virens	39.62	4.00e-10	60.10
IUUC-Tae-124308	Triticum aestivum	30.11	1.00e-31	132.00
IUUC-Tur-126160	Triticum urartu	51.56	4.00e-16	80.10
IUUC-Tme-127177	Tuber melanosporum	22.91	2.00e-12	67.80
IUUC-Tbe-127597	Tupaia belangeri	87.92	0.00e+00	1061.00
IUUC-Ttr-128303	Tursiops truncatus	95.42	0.00e+00	1647.00
IUUC-Uma-129488	Ustilago maydis	27.68	6.00e-19	89.40
IUUC-Vda-129815	Verticillium dahliae	42.55	2.00e-09	58.20
IUUC-Vvi-131316	Vitis vinifera	31.02	2.00e-35	144.00
IUUC-Xtr-132906	Xenopus tropicalis	68.66	0.00e+00	640.00
IUUC-Xma-133607	Xiphophorus maculatus	61.90	4.00e-153	535.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence