iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cpo-021913

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02023459

Gene Name

TRIM54

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000003839.3	ENSCPOT00000003883.2	ENSCPOP00000003465.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.50e-09	37.5	26	82

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw...........pglknssskefrCPlCr 46
           C+iCle+f++++++lpC+H  +++C + +                ss ++frCP Cr
   Q: 26   CPICLEMFSKPVVILPCQHNLCRKCANDVfqasnplwqsrGSTAVSSGGRFRCPSCR 82
           *************************87777777888899977788899********8 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

MNFTVGFKPL LGDAHSMDNL EKQLICPICL EMFSKPVVIL PCQHNLCRKC ANDVFQASNP 60
LWQSRGSTAV SSGGRFRCPS CRHEVVLDRH GVYGLQRNLL VENIIDIYKQ ESSRPLHSKA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACTTCA CGGTGGGTTT CAAGCCGCTG CTAGGGGATG CGCACAGCAT GGACAACCTG 60
GAGAAGCAGC TCATCTGCCC CATCTGCTTG GAGATGTTCT CCAAGCCCGT GGTGATCCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR017903--COS_domain
IPR033492--TRIM54
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51262--COS
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005874--C:microtubule
GO:0005875--C:microtubule associated complex
GO:0008270--F:zinc ion binding
GO:0055001--P:muscle cell development
GO:0007026--P:negative regulation of microtubule depolymerization

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002282	Ailuropoda melanoleuca	97.10	6.00e-134	469.00
IUUC-Bta-013385	Bos taurus	96.70	9.00e-177	612.00
IUUC-Cja-019697	Callithrix jacchus	78.06	1.00e-139	488.00
IUUC-Cfa-020995	Canis familiaris	97.88	2.00e-169	587.00
IUUC-Csa-023342	Chlorocebus sabaeus	97.22	0.00e+00	652.00
IUUC-Cin-025224	Ciona intestinalis	52.10	4.00e-94	338.00
IUUC-Csv-026374	Ciona savignyi	51.97	1.00e-81	295.00
IUUC-Dre-027562	Danio rerio	69.21	5.00e-145	506.00
IUUC-Dno-029582	Dasypus novemcinctus	98.48	2.00e-172	598.00
IUUC-Dor-031139	Dipodomys ordii	95.84	0.00e+00	652.00
IUUC-Ete-032346	Echinops telfairi	99.01	3.00e-109	388.00
IUUC-Eca-033645	Equus caballus	97.30	2.00e-178	618.00
IUUC-Eeu-035333	Erinaceus europaeus	69.41	4.00e-116	410.00
IUUC-Fca-035865	Felis catus	97.27	0.00e+00	629.00
IUUC-Fal-036978	Ficedula albicollis	73.09	9.00e-168	582.00
IUUC-Gga-040452	Gallus gallus	77.60	9.00e-163	565.00
IUUC-Ggo-044467	Gorilla gorilla	86.07	1.00e-173	602.00
IUUC-Hsa-046379	Homo sapiens	95.83	4.00e-179	620.00
IUUC-Itr-047912	Ictidomys tridecemlineatus	96.69	0.00e+00	642.00
IUUC-Lch-050029	Latimeria chalumnae	77.44	3.00e-152	530.00
IUUC-Loc-051801	Lepisosteus oculatus	80.62	1.00e-135	475.00
IUUC-Laf-054215	Loxodonta africana	95.60	0.00e+00	672.00
IUUC-Mcc-055027	Macaca mulatta	87.31	0.00e+00	635.00
IUUC-Meu-056412	Macropus eugenii	93.87	2.00e-168	584.00
IUUC-Mmr-060920	Microcebus murinus	96.39	0.00e+00	660.00
IUUC-Mdo-062832	Monodelphis domestica	96.66	2.00e-165	575.00
IUUC-Mmu-063707	Mus musculus	95.05	0.00e+00	627.00
IUUC-Mpu-066375	Mustela putorius furo	80.07	2.00e-107	381.00
IUUC-Mlu-067653	Myotis lucifugus	82.15	1.00e-139	488.00
IUUC-Nle-069020	Nomascus leucogenys	97.22	0.00e+00	645.00
IUUC-Opr-070577	Ochotona princeps	78.98	7.00e-144	503.00
IUUC-Ont-072491	Oreochromis niloticus	62.54	8.00e-121	426.00
IUUC-Oan-073101	Ornithorhynchus anatinus	95.15	4.00e-172	597.00
IUUC-Ocu-074454	Oryctolagus cuniculus	95.87	0.00e+00	634.00
IUUC-Oga-088361	Otolemur garnettii	98.50	2.00e-176	611.00
IUUC-Oar-089950	Ovis aries	80.48	1.00e-139	489.00
IUUC-Ptr-090785	Pan troglodytes	85.82	4.00e-173	600.00
IUUC-Pan-092344	Papio anubis	97.50	0.00e+00	653.00
IUUC-Pab-098322	Pongo abelii	93.89	2.00e-176	611.00
IUUC-Pca-100385	Procavia capensis	76.10	2.00e-122	431.00
IUUC-Rno-105134	Rattus norvegicus	95.03	0.00e+00	683.00
IUUC-Sha-106768	Sarcophilus harrisii	96.35	2.00e-178	618.00
IUUC-Tgu-117494	Taeniopygia guttata	79.81	4.00e-157	546.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence