iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099345

Ensembl Protein ID

POPTR_0012s04700.1

UniProt Accession

B9I2G9; B9I2G9_POPTR

Genbank Protein ID

EEE96748.1

Protein Name

GTP-binding protein beta chain

Genbank Nucleotide ID

CM000348

Gene Name

POPTRDRAFT_834267; POPTR_0012s04700g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0012s04700	POPTR_0012s04700.1	POPTR_0012s04700.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.20e-48	159.4	149	185
UBD/Beta-Prp	5.10e-55	187.9	11	160

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd..tllvsGsdDgtikvWDlrtgv 34
           Htd+v+c++f  s+  +++vs+s+D+t+kvW+l+ ++
   Q: 149  HTDWVSCVRFspSTlqPTIVSASWDKTVKVWNLTNCK 185
           ***********7445678**************99876 PP

UBD/Beta-Prp

   S: 89   tlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqclee....tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrt 174
           t+++h+d+v++++    ++d +vs+s+d+ i +w+l ++++ +      l+gh+++v+ vv+++dg+   sGs D+ +rlWdl+tg   r+
   Q: 11   TMRAHTDQVTAIATPIdNTDMIVSASRDKSIILWHLTKDEKTYGvarrRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGVSARR 101
           7899*******99877678******************999998899999****************************************** PP
   S: 175  ltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgec...vrtlnghtdnvksvrfsp 232
           + g ht++v s++f+ + +++vs+s+d+t+klw+   gec   +++ + htd+v++vrfsp
   Q: 102  FVG-HTKDVLSVAFSFDNRQIVSASRDKTIKLWNT-LGECkytIQEAESHTDWVSCVRFSP 160
           *99.******************************9.5666555888899**********96 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MATETLILRG TMRAHTDQVT AIATPIDNTD MIVSASRDKS IILWHLTKDE KTYGVARRRL 60
TGHSHFVQDV VLSSDGQFAL SGSWDGELRL WDLATGVSAR RFVGHTKDVL SVAFSFDNRQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATAGCCCAGT GTTGATCTCC GATAATCTCA AAACCCTAGT TTGGTTGCGC TTGTACTTCT 60
CCCTATATAA TTATCTTATC CTGGCTGCCT CTCTTCCTTA AGGGAAAAAA AAAAAACCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

pop:POPTR_0012s04700g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001935	Ailuropoda melanoleuca	67.80	6.00e-129	452.00
IUUC-Atr-002694	Amborella trichopoda	78.15	7.00e-154	535.00
IUUC-Apl-003918	Anas platyrhynchos	69.44	2.00e-118	417.00
IUUC-Aca-004869	Anolis carolinensis	67.80	6.00e-129	452.00
IUUC-Aly-005806	Arabidopsis lyrata	85.89	3.00e-166	576.00
IUUC-Ath-007584	Arabidopsis thaliana	85.58	1.00e-165	575.00
IUUC-Ago-007720	Ashbya gossypii	49.23	3.00e-87	314.00
IUUC-Acl-008156	Aspergillus clavatus	59.94	6.00e-114	402.00
IUUC-Afl-008684	Aspergillus flavus	61.18	1.00e-115	408.00
IUUC-Afu-008867	Aspergillus fumigatus	60.56	5.00e-115	406.00
IUUC-Ani-009221	Aspergillus nidulans	60.87	2.00e-115	408.00
IUUC-Ang-009843	Aspergillus niger	60.25	4.00e-114	403.00
IUUC-Aor-010193	Aspergillus oryzae	61.18	1.00e-115	408.00
IUUC-Ate-010420	Aspergillus terreus	61.69	2.00e-106	378.00
IUUC-Ame-010884	Astyanax mexicanus	67.49	4.00e-128	450.00
IUUC-Bgr-012064	Blumeria graminis	60.99	3.00e-116	410.00
IUUC-Bta-013357	Bos taurus	67.80	6.00e-129	452.00
IUUC-Bci-013862	Botrytis cinerea	61.49	3.00e-117	414.00
IUUC-Bdi-014690	Brachypodium distachyon	70.71	2.00e-137	481.00
IUUC-Bol-015582	Brassica oleracea	87.42	5.00e-168	582.00
IUUC-Bra-017700	Brassica rapa	86.54	2.00e-167	581.00
IUUC-Cel-018335	Caenorhabditis elegans	59.09	3.00e-100	357.00
IUUC-Cja-019914	Callithrix jacchus	67.80	6.00e-129	452.00
IUUC-Cfa-020755	Canis familiaris	67.80	6.00e-129	452.00
IUUC-Cpo-022377	Cavia porcellus	67.80	4.00e-129	453.00
IUUC-Cre-022909	Chlamydomonas reinhardtii	70.46	3.00e-136	477.00
IUUC-Csa-023025	Chlorocebus sabaeus	67.80	5.00e-129	453.00
IUUC-Cin-025647	Ciona intestinalis	63.53	7.00e-120	422.00
IUUC-Csv-026027	Ciona savignyi	63.53	1.00e-119	422.00
IUUC-Cgl-026718	Colletotrichum gloeosporioides	63.05	1.00e-108	385.00
IUUC-Cne-026930	Cryptococcus neoformans	63.35	1.00e-120	425.00
IUUC-Cme-027251	Cyanidioschyzon merolae	58.07	8.00e-110	389.00
IUUC-Dre-028669	Danio rerio	68.11	1.00e-128	451.00
IUUC-Dno-029470	Dasypus novemcinctus	58.46	1.00e-96	345.00
IUUC-Dor-031098	Dipodomys ordii	60.92	7.00e-97	346.00
IUUC-Dse-031255	Dothistroma septosporum	60.56	6.00e-114	403.00
IUUC-Dme-032118	Drosophila melanogaster	62.96	1.00e-116	411.00
IUUC-Ete-033182	Echinops telfairi	60.00	6.00e-76	276.00
IUUC-Eeu-034771	Erinaceus europaeus	65.02	5.00e-122	429.00
IUUC-Fca-036315	Felis catus	67.80	6.00e-129	452.00
IUUC-Fal-036990	Ficedula albicollis	63.16	4.00e-67	247.00
IUUC-Fox-037702	Fusarium oxysporum	61.80	6.00e-117	412.00
IUUC-Fso-038384	Fusarium solani	61.49	2.00e-116	411.00
IUUC-Gmo-039630	Gadus morhua	67.71	5.00e-127	446.00
IUUC-Ggr-039985	Gaeumannomyces graminis	61.80	4.00e-117	413.00
IUUC-Gga-040540	Gallus gallus	67.80	6.00e-129	452.00
IUUC-Gac-041316	Gasterosteus aculeatus	65.73	1.00e-124	438.00
IUUC-Gma-042872	Glycine max	86.15	1.00e-168	584.00
IUUC-Ggo-045253	Gorilla gorilla	67.80	6.00e-129	452.00
IUUC-Hsa-046809	Homo sapiens	67.80	6.00e-129	452.00
IUUC-Itr-048025	Ictidomys tridecemlineatus	67.80	6.00e-129	452.00
IUUC-Kpa-049214	Komagataella pastoris	51.55	3.00e-86	311.00
IUUC-Lch-049634	Latimeria chalumnae	66.25	5.00e-126	443.00
IUUC-Loc-052163	Lepisosteus oculatus	68.42	5.00e-129	453.00
IUUC-Lma-053113	Leptosphaeria maculans	61.18	2.00e-115	407.00
IUUC-Laf-054422	Loxodonta africana	67.80	6.00e-129	452.00
IUUC-Mcc-055348	Macaca mulatta	67.80	6.00e-129	453.00
IUUC-Meu-056543	Macropus eugenii	67.38	2.00e-129	454.00
IUUC-Mor-057107	Magnaporthe oryzae	61.18	2.00e-116	411.00
IUUC-Mpo-057487	Magnaporthe poae	61.49	1.00e-116	412.00
IUUC-Mtr-058808	Medicago truncatula	86.77	4.00e-169	586.00
IUUC-Mla-058909	Melampsora laricipopulina	63.38	3.00e-120	424.00
IUUC-Mga-059387	Meleagris gallopavo	67.80	6.00e-129	452.00
IUUC-Mvi-060392	Microbotryum violaceum	62.23	2.00e-117	414.00
IUUC-Mmr-061141	Microcebus murinus	62.16	3.00e-95	340.00
IUUC-Mdo-062932	Monodelphis domestica	67.80	6.00e-129	452.00
IUUC-Mmu-064132	Mus musculus	67.80	6.00e-129	452.00
IUUC-Mac-064447	Musa acuminata	69.94	2.00e-132	464.00
IUUC-Mpu-066721	Mustela putorius furo	66.87	5.00e-125	439.00
IUUC-Mlu-068221	Myotis lucifugus	67.18	5.00e-119	419.00
IUUC-Nfi-068344	Neosartorya fischeri	60.56	5.00e-115	406.00
IUUC-Ncr-068722	Neurospora crassa	60.87	3.00e-116	410.00
IUUC-Nle-069865	Nomascus leucogenys	67.80	5.00e-129	453.00
IUUC-Opr-071100	Ochotona princeps	57.28	5.00e-98	350.00
IUUC-Ont-072287	Oreochromis niloticus	68.11	5.00e-129	453.00
IUUC-Oan-072788	Ornithorhynchus anatinus	67.80	6.00e-129	452.00
IUUC-Ocu-073844	Oryctolagus cuniculus	65.33	5.00e-123	433.00
IUUC-Ola-086400	Oryzias latipes	67.80	2.00e-128	451.00
IUUC-Olu-087817	Ostreococcus lucimarinus	69.63	3.00e-138	484.00
IUUC-Oga-088811	Otolemur garnettii	67.80	6.00e-129	452.00
IUUC-Oar-089962	Ovis aries	67.80	6.00e-129	452.00
IUUC-Ptr-091340	Pan troglodytes	67.80	6.00e-129	452.00
IUUC-Pan-091946	Papio anubis	67.80	6.00e-129	453.00
IUUC-Pma-094535	Petromyzon marinus	67.49	2.00e-127	447.00
IUUC-Ppa-095898	Physcomitrella patens	74.46	3.00e-144	503.00
IUUC-Pfo-097311	Poecilia formosa	67.18	9.00e-128	449.00
IUUC-Pab-097863	Pongo abelii	67.80	6.00e-129	452.00
IUUC-Pca-100594	Procavia capensis	67.49	3.00e-128	450.00
IUUC-Ppe-101743	Prunus persica	87.69	8.00e-171	592.00
IUUC-Pva-102746	Pteropus vampyrus	54.15	1.00e-94	339.00
IUUC-Pgr-103375	Puccinia graminis	47.69	1.00e-81	295.00
IUUC-Ptt-103839	Puccinia triticina	63.16	1.00e-119	422.00
IUUC-Pte-104026	Pyrenophora teres	61.18	2.00e-115	407.00
IUUC-Pyt-104584	Pyrenophora triticirepentis	61.18	1.00e-115	408.00
IUUC-Rno-104964	Rattus norvegicus	67.80	6.00e-129	452.00
IUUC-Sce-106224	Saccharomyces cerevisiae	46.95	3.00e-83	301.00
IUUC-Sha-107409	Sarcophilus harrisii	67.80	6.00e-129	452.00
IUUC-Sja-107971	Schizosaccharomyces japonicus	59.88	4.00e-111	393.00
IUUC-Spo-108297	Schizosaccharomyces pombe	58.02	3.00e-107	380.00
IUUC-Ssl-108479	Sclerotinia sclerotiorum	61.49	3.00e-117	414.00
IUUC-Smo-109017	Selaginella moellendorffii	70.12	3.00e-136	477.00
IUUC-Sly-111496	Solanum lycopersicum	83.84	1.00e-162	565.00
IUUC-Stu-112775	Solanum tuberosum	82.62	1.00e-162	564.00
IUUC-Sar-113173	Sorex araneus	67.80	6.00e-129	452.00
IUUC-Sre-115107	Sporisorium reilianum	59.08	8.00e-116	409.00
IUUC-Ssc-116218	Sus scrofa	65.02	1.00e-124	439.00
IUUC-Tru-118202	Takifugu rubripes	66.87	9.00e-128	449.00
IUUC-Tca-120951	Theobroma cacao	88.34	6.00e-171	592.00
IUUC-Tre-121961	Trichoderma reesei	61.18	5.00e-116	409.00
IUUC-Tvi-122447	Trichoderma virens	61.18	3.00e-116	410.00
IUUC-Tme-127105	Tuber melanosporum	58.57	5.00e-108	383.00
IUUC-Tbe-128021	Tupaia belangeri	52.63	2.00e-54	204.00
IUUC-Ttr-128637	Tursiops truncatus	58.77	5.00e-106	377.00
IUUC-Uma-129634	Ustilago maydis	59.44	1.00e-115	408.00
IUUC-Vda-129923	Verticillium dahliae	61.18	1.00e-115	408.00
IUUC-Vpa-130410	Vicugna pacos	56.37	2.00e-77	281.00
IUUC-Vvi-131115	Vitis vinifera	88.31	1.00e-170	591.00
IUUC-Xtr-132105	Xenopus tropicalis	69.04	2.00e-130	457.00
IUUC-Xma-133875	Xiphophorus maculatus	67.18	8.00e-128	449.00
IUUC-Yli-134624	Yarrowia lipolytica	57.32	3.00e-107	380.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence