iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Rno-105093

Ensembl Protein ID

ENSRNOP00000025309.4

UniProt Accession

G3V8F7; G3V8F7_RAT

Genbank Protein ID

EDM17574.1

Protein Name

Golgi associated, gamma adaptin ear containing, ARF binding protein 2, isoform CRA_a; Golgi-associated, gamma adaptin ear-containing, ARF-binding protein 2

Genbank Nucleotide ID

AC096610

Gene Name

Gga2; rCG_40071

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000018599.5	ENSRNOT00000025309.5	ENSRNOP00000025309.4

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC	RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/GAT	1.10e-47	161.7	190	316

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/GAT

   S: 1    deeksklLerLlkskkPeDLreAnkLikelvkededkaekikkliseleevksnvkllnemlselspegeepednellqelyetckaar 89
           deeksklL+rLlks++PeDL++An+Lik+lvke+++k+ek+++++s++eev+s+v++l emls++++ g++  d+ +lq +ye+c+++r
   Q: 190  DEEKSKLLTRLLKSNHPEDLQAANRLIKNLVKEEQEKSEKVSRRVSAVEEVRSHVRVLREMLSMYRRPGHALPDQQALQVVYERCEKLR 278
           79*************************************************************************************** PP
   S: 90   pkllklieeeedndellaellkanDelnqvlnkykqlk 127
           p+l++l+++++d+d++lae+l+anD l+q ++ ykq++
   Q: 279  PTLFRLASDTTDDDDALAEILQANDLLTQGVLLYKQVV 316
           ***********************************986 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MAATAVAAGT GSPAGTESAE GAPGSAAALE LWLNKATNPS MAEQDWSAIQ KFCEQVNTDP 60
SGPTHAPWLL AHKIQSPQER EALYALTVLE ICMNHCGEKF HNEVAKFRFL NELIKVLSPK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGGAGAGCT AGGCGGCGTC GGTGGCTGCA GCTTTTGAGC AGGGGTGACT GCGGCCGCAG 60
CGCTGGGCAG GGCAGATGGC AGCGACGGCT GTGGCGGCGG GGACCGGATC CCCCGCAGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR008152--Clathrin_a/b/g-adaptin_app_Ig
IPR008153--Clathrin_g-adaptin_app
IPR013041--Coatomer/clathrin_app_Ig-like
IPR008942--ENTH_VHS
IPR004152--GAT_dom
IPR002014--VHS_dom

PROSITE

PS50180--GAE
PS50909--GAT
PS50179--VHS

Pfam

PF02883--Alpha_adaptinC2
PF03127--GAT
PF00790--VHS

SMART

SM00809--Alpha_adaptinC2
SM00288--VHS

Gene Ontology

GO:0030131--C:clathrin adaptor complex
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport

KEGG

rno:293455

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001341	Ailuropoda melanoleuca	86.45	0.00e+00	961.00
IUUC-Apl-003827	Anas platyrhynchos	47.82	1.00e-95	343.00
IUUC-Aca-004431	Anolis carolinensis	47.12	5.00e-132	464.00
IUUC-Bgr-012048	Blumeria graminis	23.62	4.00e-18	86.70
IUUC-Bta-013492	Bos taurus	85.05	0.00e+00	944.00
IUUC-Bci-013954	Botrytis cinerea	24.21	1.00e-19	91.30
IUUC-Cja-018800	Callithrix jacchus	84.23	0.00e+00	882.00
IUUC-Cfa-021014	Canis familiaris	83.58	0.00e+00	956.00
IUUC-Cpo-021561	Cavia porcellus	86.42	0.00e+00	933.00
IUUC-Csa-024178	Chlorocebus sabaeus	86.50	0.00e+00	989.00
IUUC-Cho-024564	Choloepus hoffmanni	87.00	1.00e-112	400.00
IUUC-Dno-029286	Dasypus novemcinctus	84.01	0.00e+00	911.00
IUUC-Dor-030125	Dipodomys ordii	78.63	1.00e-173	602.00
IUUC-Dme-031654	Drosophila melanogaster	32.53	3.00e-36	147.00
IUUC-Ete-032922	Echinops telfairi	75.97	0.00e+00	815.00
IUUC-Eca-034426	Equus caballus	85.76	0.00e+00	1002.00
IUUC-Eeu-034886	Erinaceus europaeus	67.19	2.00e-100	359.00
IUUC-Fca-035516	Felis catus	86.52	0.00e+00	971.00
IUUC-Gga-040548	Gallus gallus	67.35	5.00e-113	401.00
IUUC-Ggo-044638	Gorilla gorilla	78.35	0.00e+00	867.00
IUUC-Hsa-045912	Homo sapiens	85.55	0.00e+00	978.00
IUUC-Itr-048824	Ictidomys tridecemlineatus	89.60	0.00e+00	977.00
IUUC-Kpa-049359	Komagataella pastoris	23.85	3.00e-15	76.60
IUUC-Lma-053070	Leptosphaeria maculans	24.23	2.00e-18	87.40
IUUC-Laf-054401	Loxodonta africana	86.28	0.00e+00	920.00
IUUC-Mcc-055612	Macaca mulatta	85.93	0.00e+00	979.00
IUUC-Meu-056854	Macropus eugenii	67.18	6.00e-88	318.00
IUUC-Mor-057096	Magnaporthe oryzae	26.59	9.00e-16	79.00
IUUC-Mmr-061458	Microcebus murinus	82.60	0.00e+00	872.00
IUUC-Mdo-062796	Monodelphis domestica	63.13	0.00e+00	702.00
IUUC-Mmu-063380	Mus musculus	97.05	0.00e+00	1027.00
IUUC-Mpu-066175	Mustela putorius furo	85.17	0.00e+00	894.00
IUUC-Nle-069012	Nomascus leucogenys	84.33	0.00e+00	956.00
IUUC-Opr-070412	Ochotona princeps	75.43	0.00e+00	765.00
IUUC-Ocu-073919	Oryctolagus cuniculus	74.46	2.00e-149	523.00
IUUC-Oga-087960	Otolemur garnettii	87.03	0.00e+00	930.00
IUUC-Oar-089238	Ovis aries	85.40	0.00e+00	945.00
IUUC-Ptr-090778	Pan troglodytes	79.57	0.00e+00	893.00
IUUC-Pan-092917	Papio anubis	86.67	0.00e+00	988.00
IUUC-Pab-098685	Pongo abelii	79.95	0.00e+00	636.00
IUUC-Pca-100932	Procavia capensis	88.85	2.00e-133	469.00
IUUC-Pva-102575	Pteropus vampyrus	77.97	0.00e+00	838.00
IUUC-Pte-104353	Pyrenophora teres	25.39	2.00e-18	87.40
IUUC-Pyt-104704	Pyrenophora triticirepentis	25.08	4.00e-18	86.30
IUUC-Sha-106784	Sarcophilus harrisii	65.33	0.00e+00	713.00
IUUC-Tgu-116453	Taeniopygia guttata	64.19	3.00e-104	371.00
IUUC-Tru-117962	Takifugu rubripes	42.86	8.00e-113	400.00
IUUC-Tsy-119576	Tarsius syrichta	77.94	4.00e-96	345.00
IUUC-Tni-120554	Tetraodon nigroviridis	42.90	7.00e-121	427.00
IUUC-Tme-126920	Tuber melanosporum	24.69	2.00e-19	90.90
IUUC-Tbe-127374	Tupaia belangeri	85.12	4.00e-172	597.00
IUUC-Ttr-128868	Tursiops truncatus	81.63	0.00e+00	890.00
IUUC-Vpa-130556	Vicugna pacos	86.10	5.00e-105	374.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence