iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fal-037569

Ensembl Protein ID

ENSFALP00000011735.1

UniProt Accession

U3K9N1; U3K9N1_FICAL

Genbank Protein ID

ENSFALP00000011735

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTO01000389

Gene Name

RNF8

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFALG00000011251.1	ENSFALT00000011783.1	ENSFALP00000011735.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.70e-07	29.9	345	383

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC e+f +  ++l+C H f+  C++ w      ++++  CP+Cr
   Q: 345  CTICSEHFIE-AVTLNCAHSFCSYCINEW------TKRKVECPICR 383
           ********99.899***************......**********8 PP

Organism

Ficedula albicollis

Protein Sequence
(Fasta)

MISRKHCVFQ QNAEGQWTIQ DNKSLNGVWL NKQRLDPSKV YPIAEGDHIQ LGVPLENRET 60
AEYEYEVIKD EWEKIKPFLA QRNDLGKAKS SRTKRKFSLE ELETSGSEGP SDSRCKRDRM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC 60
CCCCCCCCCC CCCAGCTGCG ACTGGCTGCT GCTGGAGGCC GGCACGCAGG TGAGCCGCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000253--FHA_dom
IPR029063--SAM-dependent_MTases
IPR008984--SMAD_FHA_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50006--FHA_DOMAIN
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00498--FHA

SMART

SM00184--RING

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0035861--C:site of double-strand break
GO:0000151--C:ubiquitin ligase complex
GO:0003682--F:chromatin binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0006302--P:double-strand break repair
GO:0070535--P:histone H2A K63-linked ubiquitination
GO:0034244--P:negative regulation of transcription elongation from RNA polymerase II promoter
GO:0045739--P:positive regulation of DNA repair
GO:0051865--P:protein autoubiquitination
GO:0070936--P:protein K48-linked ubiquitination
GO:0010212--P:response to ionizing radiation
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

fab:101822243

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002124	Ailuropoda melanoleuca	61.50	3.00e-100	358.00
IUUC-Apl-003664	Anas platyrhynchos	83.19	1.00e-51	194.00
IUUC-Aca-005036	Anolis carolinensis	64.49	3.00e-120	425.00
IUUC-Ago-007705	Ashbya gossypii	36.99	3.00e-08	52.80
IUUC-Ame-011537	Astyanax mexicanus	41.82	5.00e-71	261.00
IUUC-Bta-013297	Bos taurus	61.21	2.00e-102	365.00
IUUC-Cja-019201	Callithrix jacchus	60.94	1.00e-110	393.00
IUUC-Cfa-021041	Canis familiaris	62.47	2.00e-114	405.00
IUUC-Csa-024133	Chlorocebus sabaeus	60.89	5.00e-115	407.00
IUUC-Cho-024624	Choloepus hoffmanni	54.46	2.00e-77	282.00
IUUC-Cgl-026486	Colletotrichum gloeosporioides	43.86	2.00e-08	53.90
IUUC-Dre-027918	Danio rerio	42.01	6.00e-69	254.00
IUUC-Dno-029774	Dasypus novemcinctus	63.64	2.00e-115	408.00
IUUC-Dor-030190	Dipodomys ordii	51.18	6.00e-74	271.00
IUUC-Dse-031157	Dothistroma septosporum	41.27	8.00e-08	52.00
IUUC-Ete-032301	Echinops telfairi	55.09	5.00e-88	318.00
IUUC-Eca-033607	Equus caballus	63.57	1.00e-105	376.00
IUUC-Eeu-034888	Erinaceus europaeus	59.60	7.00e-77	280.00
IUUC-Fca-036075	Felis catus	62.47	2.00e-115	409.00
IUUC-Fox-037681	Fusarium oxysporum	30.83	5.00e-09	55.80
IUUC-Fso-038129	Fusarium solani	32.48	8.00e-09	55.10
IUUC-Gmo-038588	Gadus morhua	38.73	2.00e-53	202.00
IUUC-Ggr-039871	Gaeumannomyces graminis	42.86	2.00e-08	54.70
IUUC-Gga-040777	Gallus gallus	77.98	2.00e-162	565.00
IUUC-Gac-042463	Gasterosteus aculeatus	39.49	4.00e-46	178.00
IUUC-Ggo-045269	Gorilla gorilla	61.21	7.00e-115	407.00
IUUC-Hsa-046249	Homo sapiens	60.98	2.00e-111	395.00
IUUC-Itr-048314	Ictidomys tridecemlineatus	60.65	7.00e-113	400.00
IUUC-Kpa-049298	Komagataella pastoris	31.62	6.00e-07	48.10
IUUC-Lch-049805	Latimeria chalumnae	52.17	1.00e-96	347.00
IUUC-Loc-052377	Lepisosteus oculatus	46.01	3.00e-75	275.00
IUUC-Mcc-055344	Macaca mulatta	60.75	1.00e-113	402.00
IUUC-Meu-055950	Macropus eugenii	63.66	1.00e-109	389.00
IUUC-Mor-057012	Magnaporthe oryzae	42.86	5.00e-09	56.20
IUUC-Mla-059052	Melampsora laricipopulina	36.71	2.00e-11	61.60
IUUC-Mga-060049	Meleagris gallopavo	79.76	6.00e-160	556.00
IUUC-Mmr-061431	Microcebus murinus	61.74	2.00e-105	375.00
IUUC-Mdo-062016	Monodelphis domestica	68.43	5.00e-113	402.00
IUUC-Mmu-063235	Mus musculus	56.43	2.00e-102	365.00
IUUC-Mpu-066449	Mustela putorius furo	63.55	9.00e-120	423.00
IUUC-Mlu-067588	Myotis lucifugus	60.56	3.00e-101	362.00
IUUC-Nle-069192	Nomascus leucogenys	61.45	6.00e-115	407.00
IUUC-Opr-070300	Ochotona princeps	48.24	7.00e-76	277.00
IUUC-Ont-071998	Oreochromis niloticus	41.82	1.00e-52	200.00
IUUC-Oan-073610	Ornithorhynchus anatinus	64.78	5.00e-58	216.00
IUUC-Ocu-074603	Oryctolagus cuniculus	61.31	2.00e-107	382.00
IUUC-Ola-086681	Oryzias latipes	39.60	1.00e-58	220.00
IUUC-Oga-088183	Otolemur garnettii	61.21	1.00e-112	399.00
IUUC-Oar-090255	Ovis aries	60.65	2.00e-102	365.00
IUUC-Ptr-091029	Pan troglodytes	61.12	9.00e-117	413.00
IUUC-Pan-092241	Papio anubis	60.42	9.00e-114	403.00
IUUC-Psi-093506	Pelodiscus sinensis	76.92	6.00e-142	497.00
IUUC-Pma-094579	Petromyzon marinus	57.78	1.00e-25	110.00
IUUC-Pfo-097014	Poecilia formosa	42.36	5.00e-53	201.00
IUUC-Pab-098530	Pongo abelii	60.98	3.00e-115	408.00
IUUC-Pca-100939	Procavia capensis	51.36	2.00e-76	279.00
IUUC-Pva-103148	Pteropus vampyrus	56.98	1.00e-100	359.00
IUUC-Rno-105338	Rattus norvegicus	57.81	7.00e-107	380.00
IUUC-Sce-106402	Saccharomyces cerevisiae	38.36	2.00e-08	53.50
IUUC-Sha-107187	Sarcophilus harrisii	66.09	4.00e-103	367.00
IUUC-Sar-113356	Sorex araneus	51.24	1.00e-87	316.00
IUUC-Ssc-116290	Sus scrofa	63.23	4.00e-127	447.00
IUUC-Tru-117910	Takifugu rubripes	40.54	3.00e-49	189.00
IUUC-Tsy-119329	Tarsius syrichta	57.67	6.00e-97	347.00
IUUC-Tni-120521	Tetraodon nigroviridis	59.54	2.00e-34	139.00
IUUC-Tre-121954	Trichoderma reesei	41.27	1.00e-08	54.70
IUUC-Tvi-122295	Trichoderma virens	41.27	2.00e-08	53.50
IUUC-Ttr-128997	Tursiops truncatus	55.68	1.00e-101	362.00
IUUC-Vda-130024	Verticillium dahliae	42.86	9.00e-09	55.10
IUUC-Vpa-130154	Vicugna pacos	60.05	6.00e-115	407.00
IUUC-Xtr-132805	Xenopus tropicalis	53.97	2.00e-92	332.00
IUUC-Xma-133620	Xiphophorus maculatus	42.72	2.00e-51	196.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence