iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAF	PhosphositePlus
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	97.36	3.00e-165	578.00	IUUC-Hsa-046920

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MSDSGVCVLA FKCPGLLRYT AYRCKQLSDT SIIAVASHCP LLQKVHVGNQ DKLTDEGLKQ 60
LGSKCRELKD IHFGQCYKIS DEGMVVIAKS CLKLQRIYMQ ENKLVTDQSV KAFAEHCPDL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGGCTG CTGCCAGGCC CCGGAGCAGC CCCCGCCGCC GCTCTGCCCC GCGCCCGCCT 60
CTCCCGCCTC CGAGTGTGCC CCCATCGAGG CCGCCGCCGG GGACGCAGTC CGAGCCGGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR006553--Leu-rich_rpt_Cys-con_subtyp

Pfam

PF13516--LRR_6

SMART

SM00367--LRR_CC

KEGG

rno:316663

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002032	Ailuropoda melanoleuca	97.36	5.00e-166	577.00
IUUC-Apl-003766	Anas platyrhynchos	89.77	5.00e-132	463.00
IUUC-Aca-005107	Anolis carolinensis	92.35	1.00e-98	352.00
IUUC-Ame-011514	Astyanax mexicanus	72.12	9.00e-43	167.00
IUUC-Bta-013098	Bos taurus	95.33	1.00e-58	218.00
IUUC-Cja-019467	Callithrix jacchus	97.36	1.00e-165	576.00
IUUC-Cfa-020024	Canis familiaris	97.36	5.00e-166	577.00
IUUC-Cpo-021473	Cavia porcellus	96.43	3.00e-94	337.00
IUUC-Csa-023932	Chlorocebus sabaeus	97.02	2.00e-94	339.00
IUUC-Cho-024827	Choloepus hoffmanni	96.17	2.00e-136	478.00
IUUC-Dor-030648	Dipodomys ordii	80.08	8.00e-105	373.00
IUUC-Ete-032460	Echinops telfairi	82.95	3.00e-102	364.00
IUUC-Eca-034004	Equus caballus	97.36	2.00e-166	577.00
IUUC-Eeu-034554	Erinaceus europaeus	73.33	4.00e-86	311.00
IUUC-Fca-035592	Felis catus	97.36	2.00e-166	577.00
IUUC-Fal-036750	Ficedula albicollis	91.39	2.00e-160	558.00
IUUC-Gmo-038685	Gadus morhua	69.03	2.00e-41	161.00
IUUC-Gga-040203	Gallus gallus	91.39	9.00e-160	556.00
IUUC-Hsa-046920	Homo sapiens	97.36	2.00e-165	576.00
IUUC-Lch-049535	Latimeria chalumnae	77.98	5.00e-78	284.00
IUUC-Loc-052238	Lepisosteus oculatus	73.53	4.00e-44	170.00
IUUC-Mcc-054939	Macaca mulatta	97.36	1.00e-165	576.00
IUUC-Meu-056168	Macropus eugenii	71.43	7.00e-78	283.00
IUUC-Mmr-061483	Microcebus murinus	97.36	2.00e-166	577.00
IUUC-Mdo-062006	Monodelphis domestica	95.70	5.00e-162	564.00
IUUC-Mpu-065771	Mustela putorius furo	97.36	4.00e-166	577.00
IUUC-Mlu-067338	Myotis lucifugus	97.02	1.00e-94	338.00
IUUC-Opr-070744	Ochotona princeps	86.80	2.00e-143	501.00
IUUC-Ola-086864	Oryzias latipes	68.57	1.00e-39	155.00
IUUC-Oga-088756	Otolemur garnettii	97.03	5.00e-165	573.00
IUUC-Oar-089491	Ovis aries	96.70	1.00e-165	575.00
IUUC-Ptr-091120	Pan troglodytes	97.36	2.00e-165	576.00
IUUC-Pan-092746	Papio anubis	97.02	2.00e-94	339.00
IUUC-Psi-093402	Pelodiscus sinensis	91.04	7.00e-134	469.00
IUUC-Pca-100179	Procavia capensis	84.11	4.00e-105	374.00
IUUC-Pva-102200	Pteropus vampyrus	79.07	4.00e-113	400.00
IUUC-Sha-107408	Sarcophilus harrisii	92.45	4.00e-56	210.00
IUUC-Sja-107658	Schizosaccharomyces japonicus	25.38	8.00e-10	58.50
IUUC-Sar-113484	Sorex araneus	67.05	1.00e-83	303.00
IUUC-Ssc-116229	Sus scrofa	97.12	9.00e-57	214.00
IUUC-Tgu-116754	Taeniopygia guttata	90.52	6.00e-107	380.00
IUUC-Tsy-119390	Tarsius syrichta	96.55	2.00e-137	482.00
IUUC-Tni-120505	Tetraodon nigroviridis	69.81	5.00e-41	160.00
IUUC-Ttr-129011	Tursiops truncatus	79.31	1.00e-114	405.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence