iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ncr-068687

Ensembl Protein ID

EAA36482

UniProt Accession

Q7SHN1; Q7SHN1_NEUCR

Genbank Protein ID

EAA36482.1

Protein Name

RNA polymerase II transcription factor B subunit 3

Genbank Nucleotide ID

CM002236

Gene Name

NCU02587

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
NCU02587	EAA36482	EAA36482

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	39.32	5.00e-22	102.00	IUUC-Hsa-045876
E3 activity/RING/RING	28.91	3.00e-38	154.00	IUUC-Sce-106405

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Neurospora crassa

Protein Sequence
(Fasta)

MARPLDPLGF EDEMCPVCKS RKYLNPDIVF VFNPECYHSM CLNCANRLFN DGPNQCPHAG 60
CNKTLRRKGF RSAFFGDLAV EREVDIRRRV AAVFNQVEDD FETLQDYNNY LQMVEDLTFE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCGCC CTCTCGACCC CCTCGGCTTC GAAGACGAAA TGTGCCCCGT CTGCAAATCG 60
CGCAAGTACC TCAACCCCGA CATCGTCTTC GTCTTCAACC CCGAATGCTA CCACTCCATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR015877--Cdk-activating_kinase_MAT1_cen
IPR004575--MAT1/Tfb3
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF06391--MAT1
PF17121--zf-C3HC4_5

Gene Ontology

GO:0005675--C:holo TFIIH complex
GO:0061575--F:cyclin-dependent protein serine/threonine kinase activator activity
GO:0008270--F:zinc ion binding
GO:0007049--P:cell cycle
GO:0006281--P:DNA repair
GO:0000079--P:regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0006357--P:regulation of transcription from RNA polymerase II promoter

KEGG

ncr:NCU02587

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000821	Aegilops tauschii	50.00	5.00e-04	36.20
IUUC-Aml-002414	Ailuropoda melanoleuca	28.12	1.00e-28	118.00
IUUC-Atr-002627	Amborella trichopoda	49.02	2.00e-11	60.50
IUUC-Apl-003312	Anas platyrhynchos	26.30	2.00e-18	84.00
IUUC-Aca-004731	Anolis carolinensis	29.75	1.00e-31	128.00
IUUC-Aly-006244	Arabidopsis lyrata	42.22	9.00e-10	54.70
IUUC-Ath-007136	Arabidopsis thaliana	31.25	2.00e-09	53.10
IUUC-Ago-007788	Ashbya gossypii	31.04	2.00e-43	167.00
IUUC-Acl-008179	Aspergillus clavatus	37.90	1.00e-57	214.00
IUUC-Afl-008465	Aspergillus flavus	38.82	6.00e-57	213.00
IUUC-Afu-009056	Aspergillus fumigatus	38.76	4.00e-58	216.00
IUUC-Ani-009235	Aspergillus nidulans	34.51	4.00e-24	103.00
IUUC-Ang-009677	Aspergillus niger	39.94	2.00e-54	204.00
IUUC-Aor-010017	Aspergillus oryzae	39.24	2.00e-58	218.00
IUUC-Ate-010259	Aspergillus terreus	37.54	9.00e-53	198.00
IUUC-Ame-010934	Astyanax mexicanus	27.74	6.00e-23	99.40
IUUC-Bgr-012074	Blumeria graminis	46.01	7.00e-73	265.00
IUUC-Bta-013329	Bos taurus	28.12	4.00e-28	116.00
IUUC-Bci-013704	Botrytis cinerea	42.36	2.00e-76	277.00
IUUC-Bdi-014606	Brachypodium distachyon	49.02	1.00e-11	61.20
IUUC-Bra-017894	Brassica rapa	46.67	1.00e-10	57.80
IUUC-Cel-018428	Caenorhabditis elegans	34.06	7.00e-22	95.90
IUUC-Cja-019720	Callithrix jacchus	27.81	2.00e-28	117.00
IUUC-Cfa-020319	Canis familiaris	28.12	3.00e-28	117.00
IUUC-Cpo-021652	Cavia porcellus	28.12	3.00e-28	116.00
IUUC-Cre-022749	Chlamydomonas reinhardtii	32.93	6.00e-10	55.10
IUUC-Csa-023560	Chlorocebus sabaeus	28.12	9.00e-29	119.00
IUUC-Cin-025502	Ciona intestinalis	28.30	2.00e-27	114.00
IUUC-Csv-026302	Ciona savignyi	28.35	1.00e-29	121.00
IUUC-Cgl-026541	Colletotrichum gloeosporioides	36.05	8.00e-24	101.00
IUUC-Cne-027055	Cryptococcus neoformans	39.73	2.00e-30	124.00
IUUC-Cme-027128	Cyanidioschyzon merolae	43.10	5.00e-08	49.30
IUUC-Dre-027714	Danio rerio	37.06	1.00e-25	108.00
IUUC-Dno-029232	Dasypus novemcinctus	35.21	7.00e-25	104.00
IUUC-Dor-030996	Dipodomys ordii	36.36	1.00e-10	58.50
IUUC-Dse-031359	Dothistroma septosporum	40.81	5.00e-55	206.00
IUUC-Dme-031992	Drosophila melanogaster	39.19	2.00e-27	114.00
IUUC-Ete-032973	Echinops telfairi	31.03	8.00e-06	42.70
IUUC-Eca-034116	Equus caballus	28.12	2.00e-28	117.00
IUUC-Eeu-035143	Erinaceus europaeus	27.46	6.00e-13	65.90
IUUC-Fca-035960	Felis catus	28.12	3.00e-28	117.00
IUUC-Fal-037039	Ficedula albicollis	27.67	5.00e-18	82.80
IUUC-Fox-037882	Fusarium oxysporum	47.91	1.00e-77	281.00
IUUC-Fso-038318	Fusarium solani	48.36	1.00e-88	318.00
IUUC-Gmo-038905	Gadus morhua	28.35	2.00e-24	103.00
IUUC-Ggr-039857	Gaeumannomyces graminis	44.27	8.00e-53	198.00
IUUC-Gga-041216	Gallus gallus	33.80	2.00e-24	103.00
IUUC-Gac-041987	Gasterosteus aculeatus	36.62	6.00e-25	106.00
IUUC-Gma-044312	Glycine max	43.48	2.00e-12	63.90
IUUC-Ggo-044930	Gorilla gorilla	25.31	5.00e-17	79.70
IUUC-Hsa-045876	Homo sapiens	28.12	9.00e-29	119.00
IUUC-Hvu-047088	Hordeum vulgare	47.92	4.00e-11	59.30
IUUC-Itr-048476	Ictidomys tridecemlineatus	34.48	2.00e-20	90.10
IUUC-Kpa-049202	Komagataella pastoris	30.15	3.00e-42	163.00
IUUC-Lch-049886	Latimeria chalumnae	27.67	6.00e-26	109.00
IUUC-Lpe-051199	Leersia perrieri	54.17	2.00e-12	63.50
IUUC-Loc-052556	Lepisosteus oculatus	35.21	9.00e-25	105.00
IUUC-Lma-053002	Leptosphaeria maculans	35.39	1.00e-52	198.00
IUUC-Laf-054516	Loxodonta africana	28.44	6.00e-29	119.00
IUUC-Mcc-054761	Macaca mulatta	27.72	1.00e-25	108.00
IUUC-Mor-057048	Magnaporthe oryzae	47.80	3.00e-70	256.00
IUUC-Mpo-057598	Magnaporthe poae	55.96	4.00e-25	105.00
IUUC-Mtr-058131	Medicago truncatula	53.33	3.00e-12	62.80
IUUC-Mla-059009	Melampsora laricipopulina	44.12	1.00e-31	127.00
IUUC-Mga-060199	Meleagris gallopavo	33.33	2.00e-17	80.10
IUUC-Mvi-060382	Microbotryum violaceum	40.69	2.00e-29	121.00
IUUC-Mmr-061671	Microcebus murinus	27.62	6.00e-26	108.00
IUUC-Mdo-062228	Monodelphis domestica	28.88	1.00e-28	118.00
IUUC-Mmu-064416	Mus musculus	28.44	5.00e-29	119.00
IUUC-Mac-064807	Musa acuminata	57.78	1.00e-11	60.80
IUUC-Mpu-066455	Mustela putorius furo	28.12	4.00e-28	116.00
IUUC-Mlu-067325	Myotis lucifugus	34.48	3.00e-20	89.70
IUUC-Nfi-068566	Neosartorya fischeri	38.99	9.00e-59	218.00
IUUC-Nle-069937	Nomascus leucogenys	28.12	9.00e-29	119.00
IUUC-Opr-070321	Ochotona princeps	39.56	3.00e-16	77.40
IUUC-Ont-072636	Oreochromis niloticus	28.66	2.00e-25	107.00
IUUC-Oan-072915	Ornithorhynchus anatinus	27.27	2.00e-16	77.40
IUUC-Ocu-074547	Oryctolagus cuniculus	27.90	2.00e-25	107.00
IUUC-Oba-075318	Oryza barthii	52.08	6.00e-12	62.00
IUUC-Obr-076081	Oryza brachyantha	39.29	3.00e-12	62.80
IUUC-Ogl-077072	Oryza glaberrima	52.08	6.00e-12	62.00
IUUC-Ogu-078667	Oryza glumaepatula	49.02	1.00e-11	61.20
IUUC-Oin-079796	Oryza indica	52.08	5.00e-12	62.40
IUUC-Olo-080344	Oryza longistaminata	31.31	2.00e-07	47.00
IUUC-Ome-081805	Oryza meridionalis	52.08	4.00e-12	63.20
IUUC-Oni-082783	Oryza nivara	52.08	6.00e-12	62.00
IUUC-Opu-083247	Oryza punctata	47.06	2.00e-11	60.50
IUUC-Oru-084336	Oryza rufipogon	52.08	6.00e-12	62.00
IUUC-Osa-086047	Oryza sativa	52.08	5.00e-12	62.40
IUUC-Ola-086780	Oryzias latipes	29.91	5.00e-30	122.00
IUUC-Olu-087653	Ostreococcus lucimarinus	46.67	1.00e-07	47.40
IUUC-Oga-088012	Otolemur garnettii	27.39	2.00e-26	110.00
IUUC-Oar-090274	Ovis aries	25.31	5.00e-20	89.70
IUUC-Ptr-090780	Pan troglodytes	28.12	9.00e-29	119.00
IUUC-Pan-091815	Papio anubis	35.40	3.00e-17	80.10
IUUC-Psi-093883	Pelodiscus sinensis	27.41	4.00e-29	119.00
IUUC-Pma-094717	Petromyzon marinus	34.62	9.00e-10	55.10
IUUC-Pno-094958	Phaeosphaeria nodorum	35.34	4.00e-57	213.00
IUUC-Ppa-095445	Physcomitrella patens	46.81	6.00e-10	55.50
IUUC-Pfo-096051	Poecilia formosa	37.32	9.00e-27	112.00
IUUC-Pab-097609	Pongo abelii	28.09	5.00e-26	109.00
IUUC-Pop-099460	Populus trichocarpa	27.76	1.00e-11	61.20
IUUC-Pca-101094	Procavia capensis	26.64	7.00e-21	92.40
IUUC-Ppe-101481	Prunus persica	48.89	1.00e-11	60.80
IUUC-Pva-103219	Pteropus vampyrus	35.21	2.00e-25	107.00
IUUC-Pgr-103557	Puccinia graminis	45.00	5.00e-33	133.00
IUUC-Ptt-103719	Puccinia triticina	44.93	7.00e-33	132.00
IUUC-Pte-104301	Pyrenophora teres	56.30	2.00e-38	150.00
IUUC-Pyt-104486	Pyrenophora triticirepentis	57.02	9.00e-38	148.00
IUUC-Rno-105846	Rattus norvegicus	28.44	4.00e-29	119.00
IUUC-Sce-106405	Saccharomyces cerevisiae	30.82	3.00e-40	157.00
IUUC-Sha-107594	Sarcophilus harrisii	30.00	2.00e-17	80.10
IUUC-Sja-107951	Schizosaccharomyces japonicus	33.54	6.00e-39	152.00
IUUC-Spo-108137	Schizosaccharomyces pombe	45.86	3.00e-37	146.00
IUUC-Ssl-108503	Sclerotinia sclerotiorum	44.57	4.00e-84	302.00
IUUC-Smo-108895	Selaginella moellendorffii	40.24	3.00e-12	62.80
IUUC-Sit-110672	Setaria italica	49.02	1.00e-11	60.80
IUUC-Sly-111744	Solanum lycopersicum	43.75	5.00e-10	55.50
IUUC-Stu-112343	Solanum tuberosum	43.75	5.00e-10	55.50
IUUC-Sar-113298	Sorex araneus	36.62	3.00e-26	110.00
IUUC-Sbi-113918	Sorghum bicolor	50.98	2.00e-12	63.50
IUUC-Sre-114991	Sporisorium reilianum	39.26	2.00e-24	105.00
IUUC-Ssc-116152	Sus scrofa	34.23	6.00e-18	82.00
IUUC-Tgu-116452	Taeniopygia guttata	28.57	1.00e-26	111.00
IUUC-Tru-118621	Takifugu rubripes	27.79	4.00e-27	113.00
IUUC-Tsy-119500	Tarsius syrichta	32.81	6.00e-26	109.00
IUUC-Tni-120454	Tetraodon nigroviridis	33.91	8.00e-15	72.40
IUUC-Tca-121192	Theobroma cacao	28.74	4.00e-15	72.40
IUUC-Tre-122011	Trichoderma reesei	48.91	6.00e-87	312.00
IUUC-Tvi-122317	Trichoderma virens	49.32	8.00e-95	338.00
IUUC-Tae-123854	Triticum aestivum	47.92	3.00e-11	59.30
IUUC-Tur-126556	Triticum urartu	45.83	9.00e-11	58.20
IUUC-Tme-127135	Tuber melanosporum	38.05	9.00e-43	165.00
IUUC-Tbe-127287	Tupaia belangeri	26.95	3.00e-19	87.00
IUUC-Ttr-128864	Tursiops truncatus	28.12	2.00e-28	117.00
IUUC-Uma-129539	Ustilago maydis	39.55	4.00e-27	113.00
IUUC-Vda-129713	Verticillium dahliae	47.12	2.00e-71	260.00
IUUC-Vpa-130462	Vicugna pacos	26.25	7.00e-21	92.40
IUUC-Vvi-130988	Vitis vinifera	51.11	2.00e-11	60.10
IUUC-Xtr-131830	Xenopus tropicalis	29.15	1.00e-26	110.00
IUUC-Xma-133952	Xiphophorus maculatus	37.32	8.00e-27	112.00
IUUC-Yli-134433	Yarrowia lipolytica	34.58	9.00e-54	201.00
IUUC-Zma-134867	Zea mays	40.28	4.00e-12	62.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence