iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007395

UUCD1 version

UUC-ArT-00728

Ensembl Protein ID

AT1G69330.1

UniProt Accession

Q9C546; Q9C546_ARATH

Genbank Protein ID

AAG52506.1; AAG60094.1; AAL91275.1; AAN28772.1; AEE34912.1

Protein Name

At1g69330/F10D13.3; Putative uncharacterized protein F10D13.3; Putative uncharacterized protein F23O10.9; RING/U-box superfamily protein

Genbank Nucleotide ID

AC018364; AC073178; AY090372; AY143833; CP002684

Gene Name

F10D13.3; At1g69330; F23O10.9; F23O10_9

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT1G69330	AT1G69330.1	AT1G69330.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-06	29.6	45	100

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadCl....qkwpglknssskefr......CPlCr 46
           C+iC+e+f   ++ p+vl CgH+ +++C+     ++ ++   ss+ +r      CP+C+
   Q: 45   CPICWESFnivENVPYVLWCGHTLCQNCVfglqSAV-LRL--SSQDIRipffvsCPWCQ 100
           ********999999**************75554333.333..333333445555****7 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MWGFASNVIG SMGLKKSPKD SAQASSQCSD DEVSNISRDE EGLECPICWE SFNIVENVPY 60
VLWCGHTLCQ NCVFGLQSAV LRLSSQDIRI PFFVSCPWCQ LLSFRIVYKG NLKFPRKNFF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATTAAAAAG CTAACACGGC GGATCAACGA GAGAGAGAAA AAGAGAGAGG CTTTATTCTT 60
CTCTTCCCCG TTTCGATCTC CTCTTTAATG CATCTGCGTA TCTGATTTTG AAAGATTTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13445--zf-RING_UBOX

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

ath:AT1G69330

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006067	Arabidopsis lyrata	94.07	5.00e-137	479.00
IUUC-Bol-016461	Brassica oleracea	67.77	2.00e-72	264.00
IUUC-Bra-017972	Brassica rapa	67.77	8.00e-75	272.00
IUUC-Eca-033759	Equus caballus	32.35	3.00e-07	47.80
IUUC-Gma-044330	Glycine max	61.62	1.00e-79	288.00
IUUC-Loc-051895	Lepisosteus oculatus	31.71	7.00e-08	49.30
IUUC-Mtr-058453	Medicago truncatula	56.30	5.00e-67	246.00
IUUC-Mla-058999	Melampsora laricipopulina	48.48	2.00e-04	38.50
IUUC-Mdo-062993	Monodelphis domestica	33.82	3.00e-07	47.80
IUUC-Sly-111188	Solanum lycopersicum	52.75	5.00e-67	246.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence