iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-116343

Ensembl Protein ID

ENSSSCP00000018234.2

UniProt Accession

F1RVX3; F1RVX3_PIG

Genbank Protein ID

ENSSSCP00000018234

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU928896

Gene Name

GGA3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000017211.2	ENSSSCT00000018736.2	ENSSSCP00000018234.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/GAT	5.00e-46	156.2	158	286

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/GAT

   S: 1    deeksklLerLlkskkPeDLreAnkLikelvkededkaekikkliseleevksnvkllnemlselspegeepednellqelyetckaar 89
           deeksklL++Llksk+P+DL+eAnkLik++vkede++++k++k++++leev++nvkll+eml ++s+e+++++d+el++el+++c+++r
   Q: 158  DEEKSKLLAKLLKSKNPDDLQEANKLIKSMVKEDEARIQKVTKRLHTLEEVSNNVKLLSEMLLHYSQEDSSEADKELMKELFDRCENKR 246
           79*************************************************************************************** PP
   S: 90   pkllklieeeedndel..laellkanDelnqvlnkykqlk 127
           + l+kl++e+ednd+   l+++l+a+D+l++v+n+yk+++
   Q: 247  RALFKLASETEDNDNTldLGDILQASDNLSRVINSYKTVV 286
           **************972358*****************986 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

DKATNPSNRQ EDWEYIIGFC DQINKELEGP QIAVRLLAHK IQSPQEWEAV QALTVLEACM 60
KNCGRRFHNE VGKFRFLNEL IKVVSPKYLG DRVSEKVKTK VIELLYSWTL ALAEESKIKD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTATAATAAT TGTCCTCTTC TTTGTTCTCT CCCAAGATAA AGCCACCAAT CCTTCCAACC 60
GCCAGGAGGA CTGGGAGTAC ATAATTGGCT TTTGTGATCA AATCAACAAA GAGCTTGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR008152--Clathrin_a/b/g-adaptin_app_Ig
IPR008153--Clathrin_g-adaptin_app
IPR013041--Coatomer/clathrin_app_Ig-like
IPR008942--ENTH_VHS
IPR004152--GAT_dom
IPR027422--GGA3
IPR002014--VHS_dom

PROSITE

PS50180--GAE
PS50909--GAT
PS50179--VHS

Pfam

PF02883--Alpha_adaptinC2
PF03127--GAT
PF00790--VHS

SMART

SM00809--Alpha_adaptinC2
SM00288--VHS

Gene Ontology

GO:0030131--C:clathrin adaptor complex
GO:0005802--C:trans-Golgi network
GO:0006886--P:intracellular protein transport
GO:0045732--P:positive regulation of protein catabolic process
GO:0016192--P:vesicle-mediated transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002322	Ailuropoda melanoleuca	83.96	0.00e+00	967.00
IUUC-Apl-003683	Anas platyrhynchos	70.01	0.00e+00	824.00
IUUC-Aca-004859	Anolis carolinensis	67.29	0.00e+00	815.00
IUUC-Ago-007767	Ashbya gossypii	27.52	4.00e-13	69.70
IUUC-Ame-010868	Astyanax mexicanus	71.70	2.00e-113	402.00
IUUC-Bta-013431	Bos taurus	78.89	0.00e+00	689.00
IUUC-Cja-019158	Callithrix jacchus	80.86	0.00e+00	956.00
IUUC-Cfa-020509	Canis familiaris	85.12	0.00e+00	998.00
IUUC-Cpo-021520	Cavia porcellus	79.44	0.00e+00	949.00
IUUC-Csa-023292	Chlorocebus sabaeus	79.04	0.00e+00	960.00
IUUC-Cho-025040	Choloepus hoffmanni	87.42	7.00e-73	267.00
IUUC-Cin-025211	Ciona intestinalis	55.21	1.00e-81	297.00
IUUC-Csv-026066	Ciona savignyi	55.21	6.00e-90	325.00
IUUC-Dre-028309	Danio rerio	70.44	1.00e-117	416.00
IUUC-Dno-029654	Dasypus novemcinctus	77.41	0.00e+00	958.00
IUUC-Ete-033003	Echinops telfairi	76.66	1.00e-120	427.00
IUUC-Eca-034436	Equus caballus	86.79	0.00e+00	1088.00
IUUC-Eeu-034519	Erinaceus europaeus	89.31	6.00e-150	524.00
IUUC-Fca-035372	Felis catus	82.66	0.00e+00	943.00
IUUC-Fal-037437	Ficedula albicollis	67.89	0.00e+00	803.00
IUUC-Gmo-038952	Gadus morhua	72.01	8.00e-125	440.00
IUUC-Gga-041130	Gallus gallus	69.25	0.00e+00	830.00
IUUC-Gac-041460	Gasterosteus aculeatus	70.22	2.00e-121	429.00
IUUC-Ggo-044495	Gorilla gorilla	76.54	0.00e+00	931.00
IUUC-Hsa-046184	Homo sapiens	79.04	0.00e+00	939.00
IUUC-Itr-048345	Ictidomys tridecemlineatus	80.61	0.00e+00	972.00
IUUC-Loc-051903	Lepisosteus oculatus	75.08	4.00e-120	425.00
IUUC-Laf-054207	Loxodonta africana	80.93	0.00e+00	910.00
IUUC-Mcc-055642	Macaca mulatta	80.83	0.00e+00	964.00
IUUC-Meu-056386	Macropus eugenii	64.66	3.00e-112	399.00
IUUC-Mga-060101	Meleagris gallopavo	68.81	0.00e+00	810.00
IUUC-Mmr-060937	Microcebus murinus	83.36	0.00e+00	995.00
IUUC-Mdo-062835	Monodelphis domestica	73.16	0.00e+00	731.00
IUUC-Mmu-064008	Mus musculus	80.78	0.00e+00	918.00
IUUC-Mpu-066397	Mustela putorius furo	83.22	0.00e+00	942.00
IUUC-Mlu-067731	Myotis lucifugus	84.18	0.00e+00	1080.00
IUUC-Nle-069975	Nomascus leucogenys	80.16	2.00e-120	426.00
IUUC-Opr-070313	Ochotona princeps	76.36	0.00e+00	849.00
IUUC-Ont-072399	Oreochromis niloticus	71.79	3.00e-124	439.00
IUUC-Ocu-074749	Oryctolagus cuniculus	78.57	0.00e+00	927.00
IUUC-Ola-086409	Oryzias latipes	63.16	2.00e-114	406.00
IUUC-Olu-087840	Ostreococcus lucimarinus	27.78	4.00e-08	52.80
IUUC-Oga-088203	Otolemur garnettii	81.08	0.00e+00	898.00
IUUC-Oar-089423	Ovis aries	85.09	0.00e+00	1043.00
IUUC-Ptr-090623	Pan troglodytes	76.93	0.00e+00	823.00
IUUC-Pan-092274	Papio anubis	79.45	0.00e+00	955.00
IUUC-Psi-093397	Pelodiscus sinensis	69.75	0.00e+00	851.00
IUUC-Pma-094269	Petromyzon marinus	71.86	2.00e-102	364.00
IUUC-Pfo-096335	Poecilia formosa	69.78	1.00e-118	420.00
IUUC-Pab-097977	Pongo abelii	85.89	3.00e-134	472.00
IUUC-Pca-100991	Procavia capensis	71.71	0.00e+00	758.00
IUUC-Pva-102285	Pteropus vampyrus	85.17	0.00e+00	1034.00
IUUC-Rno-105106	Rattus norvegicus	79.09	0.00e+00	950.00
IUUC-Sha-106548	Sarcophilus harrisii	73.22	0.00e+00	855.00
IUUC-Tgu-117119	Taeniopygia guttata	68.21	0.00e+00	814.00
IUUC-Tru-118049	Takifugu rubripes	73.47	1.00e-120	427.00
IUUC-Tsy-119623	Tarsius syrichta	77.47	0.00e+00	899.00
IUUC-Tni-120803	Tetraodon nigroviridis	50.58	1.00e-173	603.00
IUUC-Ttr-129167	Tursiops truncatus	83.97	0.00e+00	992.00
IUUC-Xtr-132922	Xenopus tropicalis	60.00	0.00e+00	722.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence