iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Dre-027740

Ensembl Protein ID

ENSDARP00000065847.5

UniProt Accession

F1QIF4; F1QIF4_DANRE

Genbank Protein ID

ENSDARP00000065847

Protein Name

WD repeat domain 38

Genbank Nucleotide ID

CABZ01071018

Gene Name

wdr38

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000044801.6	ENSDART00000065848.6	ENSDARP00000065847.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.30e-25	86.7	62	100
UBD/Beta-Prp	1.10e-42	147.2	18	200

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHt++v c+ f sd +l++s+s+D+++++W  ++ ++++
   Q: 62   GHTGPVKCCVFsSDgRLFASASHDCSVRIWCSSSLKCTH 100
           8***********999***************998888887 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghe 94
           ++ hk+ ++c +fspd +ll+t ++ g++ +w+++t kll+s+sgh+++v+++ fs+dg +++++s D  +++w  s+ kc+htl++h 
   Q: 18   FSRHKGEVNCCAFSPDCQLLLTCCDAGKLYLWKTSTAKLLASVSGHTGPVKCCVFSSDGRLFASASHDCSVRIWCSSSLKCTHTLTAHR 106
           67899************************************************************************************ PP
   S: 95   dsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsv 183
           +sv ++sfsp+g++l+sG++d+ + +w +++g  le  l+gh+++v++ v+++d++ +++Gs Dr+vr+W+l+  +      +gh + v
   Q: 107  RSVETVSFSPDGQWLLSGGWDNRALIWSIQSGALLE-ELKGHNAAVQSSVFSSDSQSVATGSWDRAVRVWKLRDRQAEAMVLQGHLGNV 194
           ***********************************9.***********************************998888877666***** PP
   S: 184  yslsfd 189
            +l f+
   Q: 195  ACLCFS 200
           999876 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MWKRHPSEDF SVDNIRYFSR HKGEVNCCAF SPDCQLLLTC CDAGKLYLWK TSTAKLLASV 60
SGHTGPVKCC VFSSDGRLFA SASHDCSVRI WCSSSLKCTH TLTAHRRSVE TVSFSPDGQW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACATCTGATT CATTATTACG ATTAACAGTC ATGTGGAAGA GACATCCCTC AGAGGACTTC 60
AGCGTGGACA ACATCAGATA TTTCTCCAGA CACAAAGGAG AGGTCGGTAA GCATTATCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001664	Ailuropoda melanoleuca	50.00	1.00e-49	190.00
IUUC-Ame-010858	Astyanax mexicanus	65.17	3.00e-67	248.00
IUUC-Bta-012352	Bos taurus	48.51	3.00e-49	188.00
IUUC-Cja-019585	Callithrix jacchus	50.51	3.00e-49	188.00
IUUC-Cfa-020062	Canis familiaris	49.46	1.00e-39	156.00
IUUC-Csa-023528	Chlorocebus sabaeus	52.02	1.00e-51	196.00
IUUC-Cin-025426	Ciona intestinalis	39.73	1.00e-39	157.00
IUUC-Dno-030012	Dasypus novemcinctus	52.06	3.00e-51	195.00
IUUC-Dor-030536	Dipodomys ordii	51.41	1.00e-31	130.00
IUUC-Ete-032871	Echinops telfairi	55.00	6.00e-35	140.00
IUUC-Eca-033729	Equus caballus	51.94	5.00e-54	204.00
IUUC-Eeu-034740	Erinaceus europaeus	50.51	9.00e-50	190.00
IUUC-Fca-036514	Felis catus	49.49	4.00e-51	195.00
IUUC-Ggo-044793	Gorilla gorilla	50.00	8.00e-49	187.00
IUUC-Hsa-046414	Homo sapiens	50.51	4.00e-50	191.00
IUUC-Itr-048798	Ictidomys tridecemlineatus	50.80	9.00e-47	180.00
IUUC-Lch-049905	Latimeria chalumnae	53.66	4.00e-59	221.00
IUUC-Loc-052101	Lepisosteus oculatus	56.59	6.00e-63	234.00
IUUC-Laf-053443	Loxodonta africana	46.89	7.00e-47	180.00
IUUC-Mcc-055346	Macaca mulatta	52.02	4.00e-52	198.00
IUUC-Meu-056531	Macropus eugenii	51.93	1.00e-47	182.00
IUUC-Mmr-061721	Microcebus murinus	50.50	1.00e-51	196.00
IUUC-Mdo-062379	Monodelphis domestica	52.02	2.00e-55	209.00
IUUC-Mmu-064175	Mus musculus	50.98	1.00e-50	193.00
IUUC-Mpu-066361	Mustela putorius furo	51.52	2.00e-53	202.00
IUUC-Nle-070150	Nomascus leucogenys	51.52	1.00e-50	193.00
IUUC-Opr-071060	Ochotona princeps	45.41	3.00e-38	152.00
IUUC-Ocu-074101	Oryctolagus cuniculus	51.01	6.00e-51	194.00
IUUC-Oga-088479	Otolemur garnettii	50.51	4.00e-49	188.00
IUUC-Oar-089608	Ovis aries	49.50	7.00e-50	191.00
IUUC-Ptr-091521	Pan troglodytes	51.52	1.00e-51	196.00
IUUC-Pan-092092	Papio anubis	52.02	4.00e-52	198.00
IUUC-Pab-098454	Pongo abelii	51.01	2.00e-50	192.00
IUUC-Pca-100981	Procavia capensis	52.53	3.00e-53	201.00
IUUC-Pva-102491	Pteropus vampyrus	53.03	8.00e-55	207.00
IUUC-Rno-105417	Rattus norvegicus	51.09	2.00e-44	172.00
IUUC-Sha-107649	Sarcophilus harrisii	53.43	3.00e-57	215.00
IUUC-Sar-113110	Sorex araneus	48.62	3.00e-45	175.00
IUUC-Ssc-116197	Sus scrofa	50.00	2.00e-51	196.00
IUUC-Ttr-128709	Tursiops truncatus	46.97	4.00e-45	174.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence