iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ptr-090720

UUCD1 version

UUC-PaT-00283

Ensembl Protein ID

ENSPTRP00000012882.4

UniProt Accession

H2QA75; H2QA75_PANTR

Genbank Protein ID

JAA05898.1; JAA30274.1; JAA38592.1

Protein Name

RAB40C, member RAS oncogene family

Genbank Nucleotide ID

AACZ03105835; GABD01002826; GABE01006147

Gene Name

RAB40C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000007546.4	ENSPTRT00000013907.4	ENSPTRP00000012882.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	1.60e-16	59.9	180	227

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box

   S: 1    lsklwllrseprSLqhLCRlaIrrclgsqrlkaidkLPLPksLkdYLlyedy 52
           ++k+w ++++++SLq+LC++aI++c++ + +   dkLPLP  +k++L+++++
   Q: 180  MEKIW-RPNRVFSLQDLCCRAIVSCTPVHLI---DKLPLPVTIKSHLKSFSM 227
           67899.**********************888...***************976 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MGSQGSPVKS YDYLLKFLLV GDSDVGKGEI LESLQDGAAE SPYAYSNGID YKTTTILLDG 60
RRVKLELWDT SGQGRFCTIF RSYSRGAQGI LLVYDITNRW SFDGIDRWIK EIDEHAPGVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCGGCCGCC GTGGGGCGGA CGCAACGGGC GCAGGTGCGG GGCGCGGGCT CTCTCACGCC 60
GCGGCCTCAC CCGGCGGTGC TTCGGCAGGC GGCCGGCGCG GGGCGCAGGC GGCGCGGCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027417--P-loop_NTPase
IPR005225--Small_GTP-bd_dom
IPR001806--Small_GTPase
IPR001496--SOCS_box

PROSITE

PS50225--SOCS

Pfam

PF00071--Ras
PF07525--SOCS_box

SMART

SM00253--SOCS
SM00969--SOCS_box

Gene Ontology

GO:0005768--C:endosome
GO:0005886--C:plasma membrane
GO:0008021--C:synaptic vesicle
GO:0005525--F:GTP binding
GO:0072659--P:protein localization to plasma membrane
GO:0009306--P:protein secretion
GO:0016567--P:protein ubiquitination
GO:0007264--P:small GTPase mediated signal transduction
GO:0006904--P:vesicle docking involved in exocytosis

KEGG

ptr:467857

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001616	Ailuropoda melanoleuca	98.14	2.00e-142	498.00
IUUC-Apl-003799	Anas platyrhynchos	90.20	9.00e-130	455.00
IUUC-Ame-011203	Astyanax mexicanus	93.95	2.00e-152	531.00
IUUC-Bta-013490	Bos taurus	99.64	3.00e-151	527.00
IUUC-Cja-019990	Callithrix jacchus	99.29	4.00e-150	523.00
IUUC-Cpo-022437	Cavia porcellus	98.53	6.00e-143	499.00
IUUC-Csa-024147	Chlorocebus sabaeus	100.00	1.00e-151	528.00
IUUC-Dre-027427	Danio rerio	93.59	3.00e-152	530.00
IUUC-Dno-029998	Dasypus novemcinctus	92.80	4.00e-116	413.00
IUUC-Dor-030584	Dipodomys ordii	89.70	8.00e-109	385.00
IUUC-Dme-031810	Drosophila melanogaster	69.20	3.00e-94	337.00
IUUC-Ete-033080	Echinops telfairi	96.80	7.00e-143	499.00
IUUC-Eca-033423	Equus caballus	99.15	4.00e-126	443.00
IUUC-Eeu-034590	Erinaceus europaeus	89.27	9.00e-112	395.00
IUUC-Fca-035697	Felis catus	99.15	1.00e-121	428.00
IUUC-Fal-037070	Ficedula albicollis	97.51	1.00e-150	525.00
IUUC-Gmo-039605	Gadus morhua	92.53	1.00e-150	525.00
IUUC-Gga-040343	Gallus gallus	97.51	1.00e-150	525.00
IUUC-Gac-041833	Gasterosteus aculeatus	88.81	1.00e-143	501.00
IUUC-Ggo-045131	Gorilla gorilla	92.53	3.00e-134	470.00
IUUC-Hsa-046237	Homo sapiens	100.00	1.00e-151	528.00
IUUC-Itr-048902	Ictidomys tridecemlineatus	98.93	3.00e-151	527.00
IUUC-Lch-050193	Latimeria chalumnae	95.02	2.00e-153	534.00
IUUC-Loc-052243	Lepisosteus oculatus	93.59	2.00e-152	531.00
IUUC-Laf-054435	Loxodonta africana	97.15	5.00e-150	523.00
IUUC-Mcc-055337	Macaca mulatta	99.64	1.00e-150	525.00
IUUC-Meu-056731	Macropus eugenii	97.60	1.00e-80	292.00
IUUC-Mmr-061380	Microcebus murinus	99.28	3.00e-150	523.00
IUUC-Mdo-062438	Monodelphis domestica	97.51	2.00e-150	524.00
IUUC-Mmu-064046	Mus musculus	99.29	3.00e-151	527.00
IUUC-Mpu-066029	Mustela putorius furo	94.44	5.00e-123	432.00
IUUC-Mlu-067741	Myotis lucifugus	99.29	8.00e-151	525.00
IUUC-Nle-069240	Nomascus leucogenys	93.95	1.00e-138	485.00
IUUC-Ont-071248	Oreochromis niloticus	94.31	1.00e-152	531.00
IUUC-Oan-073432	Ornithorhynchus anatinus	97.45	4.00e-122	430.00
IUUC-Ola-086486	Oryzias latipes	86.36	7.00e-139	486.00
IUUC-Oga-088293	Otolemur garnettii	99.29	3.00e-151	527.00
IUUC-Pan-091732	Papio anubis	100.00	1.00e-151	528.00
IUUC-Psi-093627	Pelodiscus sinensis	96.09	1.00e-142	498.00
IUUC-Pma-094679	Petromyzon marinus	77.12	6.00e-109	386.00
IUUC-Pfo-097105	Poecilia formosa	93.24	5.00e-152	529.00
IUUC-Pab-098054	Pongo abelii	100.00	1.00e-151	528.00
IUUC-Pca-100775	Procavia capensis	97.93	9.00e-90	322.00
IUUC-Pva-102658	Pteropus vampyrus	98.93	3.00e-150	523.00
IUUC-Rno-105303	Rattus norvegicus	99.29	3.00e-151	527.00
IUUC-Sha-106536	Sarcophilus harrisii	97.51	2.00e-150	524.00
IUUC-Tgu-116858	Taeniopygia guttata	98.96	4.00e-114	402.00
IUUC-Tru-118264	Takifugu rubripes	77.08	4.00e-139	487.00
IUUC-Tni-120350	Tetraodon nigroviridis	93.24	4.00e-151	526.00
IUUC-Ttr-129236	Tursiops truncatus	99.29	7.00e-153	532.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence