iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sre-115133

Ensembl Protein ID

CBQ73984

UniProt Accession

E7A361; E7A361_SPORE

Genbank Protein ID

CBQ73984.1

Protein Name

Probable RSA4-WD-repeat protein involved in ribosome biogenesis

Genbank Nucleotide ID

FQ311474

Gene Name

sr11157

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
sr11157	CBQ73984	CBQ73984

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.90e-60	194.3	327	369
UBD/Beta-Prp	1.50e-70	236.2	171	437

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf......sd.tllvsGsdDgtikvWDlrtgvll 36
           gHt ++t+l++      ++ ++l+s+s Dgt++vW+++ ++++
   Q: 327  GHTKWITSLSWepihanPTnPRLASSSKDGTVRVWNPTLHRCE 369
           8***************9666****************9877775 PP

UBD/Beta-Prp

   S: 30   rdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirv.......... 120
            ++  kvw v++  + +++sgh +++ + +fsp+g++l+tg+ D+t+++wdl+t +++htl gh++ vl+ ++     kl++G+ d  + +          
   Q: 171  PQAVFKVWPVSR--CSSTMSGHASPILCSTFSPTGSLLATGAGDKTARLWDLDTETPMHTLVGHSNWVLCAEWEGRERKLATGGMDGEVWIwealdaaytg 269
           445559****99..999**************************************************************************6666666555 PP
   S: 121  ...wdletgqclee........................................tlsghdgvvncvvv.....hpdgnllvsGslDrtvrlWdlktgkllr 173
              w  +tg+ + +                                        +l+gh+++++++++     +p++  l+s+s+D+tvr+W+    ++ +
   Q: 270  rkgWLSRTGKQVDDewqaeqdqqdngeaseadskpakmgvkqrraarnaapqgkPLRGHTKWITSLSWepihaNPTNPRLASSSKDGTVRVWNPTLHRCEY 370
           55555555555555**************************************************98762222267899*********************** PP
   S: 174  tltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssD 243
            l g ht sv+++ +  +g  + ++s d+tvk+w+   g+ +rtln+h  +v+ +++s  d +l +g  D
   Q: 371  VLGG-HTASVNCVRWGGEG-AIYTASSDRTVKVWSADGGKLIRTLNEHAHWVNTIALS-TDFILRTGPFD 437
           **88.************98.9*************************************.66666666555 PP

Organism

Sporisorium reilianum

Protein Sequence
(Fasta)

MATQIPQRSA KRQRLADEKA AREAALLQAQ GQLGPSTETL VIQFQSGQDG SLLGPTINLP 60
ASTGQKELQA IINQLRRQLR QAQGPKKRSI DDPDASSDDD DDDEDLPYAF HVDLQQLTAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCACGC AAATACCCCA ACGATCTGCC AAGAGGCAAC GGCTCGCAGA CGAAAAGGCC 60
GCTCGCGAGG CCGCTCTGCT TCAGGCGCAA GGCCAGCTCG GCCCTTCCAC AGAGACGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR012972--NLE
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08154--NLE
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0000027--P:ribosomal large subunit assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000437	Aegilops tauschii	41.18	1.00e-125	441.00
IUUC-Aml-001793	Ailuropoda melanoleuca	42.30	5.00e-127	446.00
IUUC-Atr-002507	Amborella trichopoda	40.83	4.00e-124	436.00
IUUC-Apl-003964	Anas platyrhynchos	45.06	2.00e-117	414.00
IUUC-Aly-006396	Arabidopsis lyrata	40.03	1.00e-121	427.00
IUUC-Ath-007278	Arabidopsis thaliana	39.86	6.00e-121	425.00
IUUC-Ago-007951	Ashbya gossypii	43.69	5.00e-132	462.00
IUUC-Acl-008298	Aspergillus clavatus	40.28	2.00e-110	391.00
IUUC-Afl-008581	Aspergillus flavus	47.29	6.00e-103	365.00
IUUC-Afu-008906	Aspergillus fumigatus	39.94	1.00e-108	385.00
IUUC-Ani-009189	Aspergillus nidulans	39.24	2.00e-111	394.00
IUUC-Ang-009630	Aspergillus niger	47.33	7.00e-118	416.00
IUUC-Aor-010038	Aspergillus oryzae	40.44	9.00e-120	422.00
IUUC-Ate-010278	Aspergillus terreus	36.79	1.00e-93	335.00
IUUC-Ame-011890	Astyanax mexicanus	45.59	2.00e-123	434.00
IUUC-Bgr-012011	Blumeria graminis	45.67	6.00e-114	402.00
IUUC-Bta-012964	Bos taurus	41.62	3.00e-125	440.00
IUUC-Bci-013592	Botrytis cinerea	47.88	1.00e-115	408.00
IUUC-Bdi-015035	Brachypodium distachyon	41.35	7.00e-127	445.00
IUUC-Bol-015501	Brassica oleracea	39.23	2.00e-120	423.00
IUUC-Bra-017642	Brassica rapa	39.40	4.00e-120	422.00
IUUC-Cel-018430	Caenorhabditis elegans	44.16	5.00e-110	389.00
IUUC-Cja-019125	Callithrix jacchus	41.62	1.00e-125	441.00
IUUC-Cfa-021013	Canis familiaris	44.23	4.00e-122	430.00
IUUC-Cpo-021743	Cavia porcellus	40.95	1.00e-123	434.00
IUUC-Cre-022973	Chlamydomonas reinhardtii	32.17	2.00e-85	308.00
IUUC-Csa-024270	Chlorocebus sabaeus	41.46	9.00e-125	438.00
IUUC-Cin-025795	Ciona intestinalis	44.64	2.00e-119	421.00
IUUC-Csv-025953	Ciona savignyi	39.52	2.00e-116	410.00
IUUC-Cgl-026517	Colletotrichum gloeosporioides	45.98	8.00e-94	335.00
IUUC-Cne-026901	Cryptococcus neoformans	51.58	1.00e-169	587.00
IUUC-Cme-027281	Cyanidioschyzon merolae	42.19	3.00e-96	344.00
IUUC-Dre-028515	Danio rerio	40.34	7.00e-121	425.00
IUUC-Dno-029596	Dasypus novemcinctus	41.79	1.00e-125	441.00
IUUC-Dor-030494	Dipodomys ordii	40.75	3.00e-122	430.00
IUUC-Dse-031538	Dothistroma septosporum	45.14	7.00e-117	412.00
IUUC-Dme-031974	Drosophila melanogaster	38.61	8.00e-112	395.00
IUUC-Ete-032948	Echinops telfairi	52.94	1.00e-61	229.00
IUUC-Eca-033399	Equus caballus	41.69	1.00e-125	441.00
IUUC-Eeu-035013	Erinaceus europaeus	53.85	4.00e-62	230.00
IUUC-Fca-035860	Felis catus	41.79	3.00e-126	443.00
IUUC-Fal-037069	Ficedula albicollis	52.47	5.00e-78	281.00
IUUC-Fox-038059	Fusarium oxysporum	44.23	4.00e-110	390.00
IUUC-Fso-038445	Fusarium solani	44.62	6.00e-111	392.00
IUUC-Gmo-039319	Gadus morhua	41.84	4.00e-114	402.00
IUUC-Ggr-040095	Gaeumannomyces graminis	40.94	6.00e-117	412.00
IUUC-Gga-040303	Gallus gallus	50.95	5.00e-76	275.00
IUUC-Gac-042267	Gasterosteus aculeatus	41.96	7.00e-120	422.00
IUUC-Gma-043974	Glycine max	40.44	9.00e-124	435.00
IUUC-Ggo-044637	Gorilla gorilla	41.36	1.00e-124	437.00
IUUC-Hsa-046128	Homo sapiens	41.79	1.00e-126	445.00
IUUC-Hvu-047373	Hordeum vulgare	40.44	5.00e-125	439.00
IUUC-Itr-048070	Ictidomys tridecemlineatus	42.09	4.00e-127	446.00
IUUC-Kpa-049274	Komagataella pastoris	40.44	8.00e-121	425.00
IUUC-Lch-049907	Latimeria chalumnae	38.72	1.00e-113	401.00
IUUC-Lpe-050778	Leersia perrieri	38.79	2.00e-115	407.00
IUUC-Loc-051889	Lepisosteus oculatus	41.53	8.00e-121	425.00
IUUC-Lma-053041	Leptosphaeria maculans	45.51	5.00e-107	380.00
IUUC-Laf-053598	Loxodonta africana	41.62	8.00e-126	442.00
IUUC-Mcc-055660	Macaca mulatta	41.46	7.00e-125	438.00
IUUC-Meu-056197	Macropus eugenii	48.21	6.00e-107	379.00
IUUC-Mor-056949	Magnaporthe oryzae	41.20	3.00e-109	387.00
IUUC-Mpo-057571	Magnaporthe poae	51.30	5.00e-58	216.00
IUUC-Mtr-058530	Medicago truncatula	44.15	2.00e-121	427.00
IUUC-Mla-059133	Melampsora laricipopulina	57.29	5.00e-153	532.00
IUUC-Mga-059252	Meleagris gallopavo	44.29	1.00e-103	367.00
IUUC-Mvi-060522	Microbotryum violaceum	52.40	1.00e-173	600.00
IUUC-Mmr-061117	Microcebus murinus	41.08	2.00e-124	437.00
IUUC-Mdo-062892	Monodelphis domestica	40.19	2.00e-123	434.00
IUUC-Mmu-064108	Mus musculus	47.67	1.00e-120	424.00
IUUC-Mac-064430	Musa acuminata	40.44	4.00e-126	442.00
IUUC-Mpu-065882	Mustela putorius furo	41.62	7.00e-126	442.00
IUUC-Mlu-068123	Myotis lucifugus	42.64	2.00e-127	447.00
IUUC-Nfi-068484	Neosartorya fischeri	40.10	3.00e-109	387.00
IUUC-Ncr-068649	Neurospora crassa	37.24	2.00e-102	364.00
IUUC-Nle-069140	Nomascus leucogenys	41.53	2.00e-125	440.00
IUUC-Opr-070220	Ochotona princeps	44.18	7.00e-106	375.00
IUUC-Ont-072643	Oreochromis niloticus	41.96	1.00e-125	441.00
IUUC-Ocu-074007	Oryctolagus cuniculus	47.42	4.00e-122	429.00
IUUC-Oba-075904	Oryza barthii	41.87	1.00e-127	448.00
IUUC-Obr-076618	Oryza brachyantha	40.70	3.00e-127	447.00
IUUC-Ogl-077425	Oryza glaberrima	42.04	5.00e-128	449.00
IUUC-Ogu-078586	Oryza glumaepatula	41.00	4.00e-128	449.00
IUUC-Oin-079489	Oryza indica	41.15	3.00e-124	436.00
IUUC-Olo-080766	Oryza longistaminata	41.87	1.00e-127	447.00
IUUC-Ome-081905	Oryza meridionalis	41.70	2.00e-127	447.00
IUUC-Oni-083022	Oryza nivara	41.87	1.00e-127	448.00
IUUC-Opu-083615	Oryza punctata	41.70	2.00e-127	447.00
IUUC-Oru-085076	Oryza rufipogon	41.87	1.00e-127	448.00
IUUC-Osa-085516	Oryza sativa	41.87	1.00e-127	448.00
IUUC-Ola-087290	Oryzias latipes	41.96	3.00e-125	440.00
IUUC-Olu-087898	Ostreococcus lucimarinus	41.95	5.00e-121	426.00
IUUC-Oga-088980	Otolemur garnettii	41.19	3.00e-125	440.00
IUUC-Oar-089580	Ovis aries	39.09	1.00e-103	367.00
IUUC-Ptr-090845	Pan troglodytes	41.53	8.00e-125	438.00
IUUC-Pan-092836	Papio anubis	40.62	6.00e-125	439.00
IUUC-Pno-095052	Phaeosphaeria nodorum	39.62	1.00e-112	398.00
IUUC-Ppa-095432	Physcomitrella patens	42.33	5.00e-129	452.00
IUUC-Pfo-096963	Poecilia formosa	37.06	2.00e-100	357.00
IUUC-Pab-097716	Pongo abelii	40.17	9.00e-118	415.00
IUUC-Pop-099224	Populus trichocarpa	40.44	2.00e-125	440.00
IUUC-Pca-100682	Procavia capensis	46.35	1.00e-102	364.00
IUUC-Ppe-101819	Prunus persica	41.13	9.00e-126	441.00
IUUC-Pva-102338	Pteropus vampyrus	36.21	4.00e-80	289.00
IUUC-Pgr-103583	Puccinia graminis	51.33	4.00e-159	553.00
IUUC-Ptt-103737	Puccinia triticina	43.96	3.00e-126	443.00
IUUC-Pte-104150	Pyrenophora teres	45.64	3.00e-110	390.00
IUUC-Pyt-104606	Pyrenophora triticirepentis	45.64	2.00e-110	390.00
IUUC-Rno-105987	Rattus norvegicus	41.71	9.00e-124	435.00
IUUC-Sce-106315	Saccharomyces cerevisiae	41.86	1.00e-127	447.00
IUUC-Sha-107273	Sarcophilus harrisii	41.40	6.00e-127	445.00
IUUC-Sja-107677	Schizosaccharomyces japonicus	38.45	2.00e-105	374.00
IUUC-Spo-108092	Schizosaccharomyces pombe	37.35	1.00e-82	298.00
IUUC-Ssl-108442	Sclerotinia sclerotiorum	38.42	2.00e-106	377.00
IUUC-Smo-108976	Selaginella moellendorffii	39.76	1.00e-117	414.00
IUUC-Sit-110329	Setaria italica	41.87	3.00e-128	450.00
IUUC-Sly-111830	Solanum lycopersicum	39.83	5.00e-123	432.00
IUUC-Stu-112603	Solanum tuberosum	39.83	1.00e-122	431.00
IUUC-Sbi-114560	Sorghum bicolor	41.38	3.00e-126	443.00
IUUC-Ssc-115903	Sus scrofa	41.79	4.00e-125	439.00
IUUC-Tgu-116798	Taeniopygia guttata	39.26	2.00e-118	417.00
IUUC-Tru-118361	Takifugu rubripes	41.69	2.00e-124	437.00
IUUC-Tsy-118849	Tarsius syrichta	40.95	2.00e-124	437.00
IUUC-Tni-120094	Tetraodon nigroviridis	40.77	3.00e-123	433.00
IUUC-Tca-121634	Theobroma cacao	41.30	2.00e-127	447.00
IUUC-Tre-122051	Trichoderma reesei	38.55	1.00e-82	298.00
IUUC-Tvi-122322	Trichoderma virens	38.40	1.00e-83	301.00
IUUC-Tae-125822	Triticum aestivum	41.18	1.00e-125	441.00
IUUC-Tur-126766	Triticum urartu	38.72	2.00e-121	427.00
IUUC-Tme-127175	Tuber melanosporum	42.88	9.00e-123	432.00
IUUC-Tbe-127779	Tupaia belangeri	47.84	5.00e-119	419.00
IUUC-Ttr-128224	Tursiops truncatus	43.43	5.00e-118	416.00
IUUC-Uma-129537	Ustilago maydis	88.55	0.00e+00	1118.00
IUUC-Vda-129927	Verticillium dahliae	36.76	8.00e-99	352.00
IUUC-Vpa-130658	Vicugna pacos	34.28	2.00e-58	218.00
IUUC-Vvi-131659	Vitis vinifera	41.00	1.00e-128	451.00
IUUC-Xtr-132918	Xenopus tropicalis	38.71	1.00e-113	401.00
IUUC-Xma-133700	Xiphophorus maculatus	41.46	4.00e-123	432.00
IUUC-Yli-134478	Yarrowia lipolytica	40.19	3.00e-124	436.00
IUUC-Zma-135835	Zea mays	39.90	5.00e-122	429.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence