iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131659

UUCD1 version

UUC-ViV-00627

Ensembl Protein ID

VIT_13s0064g00360.t01

UniProt Accession

F6HBD2; F6HBD2_VITVI

Genbank Protein ID

CCB49534.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595509

Gene Name

VIT_13s0064g00360

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_13s0064g00360	VIT_13s0064g00360.t01	VIT_13s0064g00360.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-65	213.6	404	442
UBD/Beta-Prp	1.80e-76	257.8	104	300

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH ++v+ +++  d +ll+sGs D t+kvWD+rt++l +
   Q: 404  GHVGPVYQISWsADsRLLLSGSKDSTLKVWDIRTHKLKQ 442
           8***********555*******************99876 PP

UBD/Beta-Prp

   S: 44   llrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee 131
           + +++ gh+++v +v fspdg  l++gs D t+++wdl+t ++++t +gh++ vl++++sp+g++lvsGs+   +++wd +tg+ + +
   Q: 104  CSSTIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMYTCTGHKNWVLCIAWSPDGKHLVSGSKAGELQCWDPQTGKPSGN 191
           46788*********************************************************************************** PP
   S: 132  tlsghdgvvncvvvhpd.....gnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgec 214
           +l gh+++++++++ p      ++ +vs+s+D+  r+Wd++  k++  l+g ht +v+++++  +g  + +gs+d t+k+w+ ++g+ 
   Q: 192  PLIGHKKWITGISWEPVhlrapCRRFVSSSKDGDARIWDVSLRKCVICLSG-HTLAVTCVKWGGDG-VIYTGSQDCTIKVWETSQGKL 277
           *************998633322478*************************9.************98.99******************* PP
   S: 215  vrtlnghtdnvksvrfspnderlvs 239
           +r+l+gh  +v+s+++s  +e+++ 
   Q: 278  IRELKGHGHWVNSLALS--TEYVLR 300
           ****************9..555544 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MEMEIEEQGE TGKNVMCQLT DPEGNHLGPP MYLPQNAAPK ELQQIVNKLL NNEEKLPYAF 60
YISDQELVVQ LGTYLQKNKV SVEKVLPIVY QLQAVFRIRP INRCSSTIAG HTEAVLSVAF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCTAACAAC CCTAAAACCC CCACCGTTCA TCTCCCAGAC GGTACGTTTT CAGTCGCAGA 60
AGCTGCAGAG AGCAAACCCT AGGTGAACGA GCAACAATGG AGATGGAAAT AGAAGAGCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001632--Gprotein_B
IPR012972--NLE
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08154--NLE
PF00400--WD40

PRINTS

PR00319--GPROTEINB
PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0005840--C:ribosome
GO:0000027--P:ribosomal large subunit assembly

KEGG

vvi:100262007

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000437	Aegilops tauschii	78.96	0.00e+00	786.00
IUUC-Aml-001793	Ailuropoda melanoleuca	58.64	4.00e-172	596.00
IUUC-Atr-002507	Amborella trichopoda	84.37	0.00e+00	840.00
IUUC-Apl-003964	Anas platyrhynchos	59.51	1.00e-163	568.00
IUUC-Aly-006396	Arabidopsis lyrata	78.83	0.00e+00	808.00
IUUC-Ath-007278	Arabidopsis thaliana	79.91	0.00e+00	807.00
IUUC-Ago-007951	Ashbya gossypii	48.09	7.00e-134	469.00
IUUC-Acl-008298	Aspergillus clavatus	46.86	1.00e-123	435.00
IUUC-Afl-008581	Aspergillus flavus	54.67	8.00e-114	402.00
IUUC-Afu-008906	Aspergillus fumigatus	45.93	5.00e-122	430.00
IUUC-Ani-009189	Aspergillus nidulans	45.25	9.00e-122	429.00
IUUC-Ang-009630	Aspergillus niger	49.23	9.00e-130	456.00
IUUC-Aor-010038	Aspergillus oryzae	48.17	3.00e-134	471.00
IUUC-Ate-010278	Aspergillus terreus	46.53	2.00e-125	441.00
IUUC-Ame-011890	Astyanax mexicanus	58.42	2.00e-166	577.00
IUUC-Bgr-012011	Blumeria graminis	51.37	5.00e-126	443.00
IUUC-Bta-012964	Bos taurus	58.00	2.00e-170	590.00
IUUC-Bci-013592	Botrytis cinerea	46.59	1.00e-123	435.00
IUUC-Bdi-015035	Brachypodium distachyon	80.00	0.00e+00	801.00
IUUC-Bol-015501	Brassica oleracea	78.83	0.00e+00	808.00
IUUC-Bra-017642	Brassica rapa	78.41	0.00e+00	804.00
IUUC-Cel-018430	Caenorhabditis elegans	51.84	1.00e-142	498.00
IUUC-Cja-019125	Callithrix jacchus	59.06	2.00e-171	594.00
IUUC-Cfa-021013	Canis familiaris	57.91	6.00e-162	563.00
IUUC-Cpo-021743	Cavia porcellus	58.00	1.00e-170	592.00
IUUC-Cre-022973	Chlamydomonas reinhardtii	51.69	2.00e-143	501.00
IUUC-Csa-024270	Chlorocebus sabaeus	58.85	3.00e-171	593.00
IUUC-Cin-025795	Ciona intestinalis	54.79	3.00e-163	567.00
IUUC-Csv-025953	Ciona savignyi	56.78	3.00e-165	573.00
IUUC-Cgl-026517	Colletotrichum gloeosporioides	51.47	1.00e-108	385.00
IUUC-Cne-026901	Cryptococcus neoformans	47.81	3.00e-138	484.00
IUUC-Cme-027281	Cyanidioschyzon merolae	47.66	3.00e-116	411.00
IUUC-Dre-028515	Danio rerio	59.49	3.00e-167	580.00
IUUC-Dno-029596	Dasypus novemcinctus	58.64	2.00e-171	594.00
IUUC-Dor-030494	Dipodomys ordii	57.57	3.00e-168	583.00
IUUC-Dse-031538	Dothistroma septosporum	48.72	2.00e-129	455.00
IUUC-Dme-031974	Drosophila melanogaster	54.17	1.00e-155	542.00
IUUC-Ete-032948	Echinops telfairi	64.25	2.00e-78	285.00
IUUC-Eca-033399	Equus caballus	58.64	5.00e-171	593.00
IUUC-Eeu-035013	Erinaceus europaeus	63.29	3.00e-77	281.00
IUUC-Fca-035860	Felis catus	58.00	2.00e-171	594.00
IUUC-Fal-037069	Ficedula albicollis	61.94	5.00e-92	329.00
IUUC-Fox-038059	Fusarium oxysporum	49.77	4.00e-124	437.00
IUUC-Fso-038445	Fusarium solani	46.32	2.00e-122	432.00
IUUC-Gmo-039319	Gadus morhua	58.15	7.00e-156	542.00
IUUC-Ggr-040095	Gaeumannomyces graminis	47.37	1.00e-123	436.00
IUUC-Gga-040303	Gallus gallus	62.75	4.00e-92	329.00
IUUC-Gac-042267	Gasterosteus aculeatus	58.90	3.00e-160	557.00
IUUC-Gma-043974	Glycine max	86.88	0.00e+00	875.00
IUUC-Ggo-044637	Gorilla gorilla	58.42	6.00e-170	589.00
IUUC-Hsa-046128	Homo sapiens	58.64	1.00e-171	595.00
IUUC-Hvu-047373	Hordeum vulgare	77.61	0.00e+00	783.00
IUUC-Itr-048070	Ictidomys tridecemlineatus	57.59	4.00e-170	590.00
IUUC-Kpa-049274	Komagataella pastoris	45.16	8.00e-129	452.00
IUUC-Lch-049907	Latimeria chalumnae	55.16	7.00e-156	542.00
IUUC-Lpe-050778	Leersia perrieri	73.79	0.00e+00	736.00
IUUC-Loc-051889	Lepisosteus oculatus	58.21	2.00e-166	577.00
IUUC-Lma-053041	Leptosphaeria maculans	51.42	4.00e-124	437.00
IUUC-Laf-053598	Loxodonta africana	57.80	7.00e-173	599.00
IUUC-Mcc-055660	Macaca mulatta	58.85	2.00e-171	594.00
IUUC-Meu-056197	Macropus eugenii	50.42	3.00e-142	497.00
IUUC-Mor-056949	Magnaporthe oryzae	48.23	5.00e-121	427.00
IUUC-Mpo-057571	Magnaporthe poae	55.09	2.00e-66	245.00
IUUC-Mtr-058530	Medicago truncatula	85.41	0.00e+00	823.00
IUUC-Mla-059133	Melampsora laricipopulina	48.67	5.00e-132	463.00
IUUC-Mga-059252	Meleagris gallopavo	60.88	2.00e-133	467.00
IUUC-Mvi-060522	Microbotryum violaceum	46.68	7.00e-134	469.00
IUUC-Mmr-061117	Microcebus murinus	57.45	1.00e-167	582.00
IUUC-Mdo-062892	Monodelphis domestica	58.18	3.00e-170	590.00
IUUC-Mmu-064108	Mus musculus	58.21	3.00e-165	573.00
IUUC-Mac-064430	Musa acuminata	87.21	0.00e+00	875.00
IUUC-Mpu-065882	Mustela putorius furo	58.21	2.00e-170	591.00
IUUC-Mlu-068123	Myotis lucifugus	58.64	3.00e-171	593.00
IUUC-Nfi-068484	Neosartorya fischeri	45.73	7.00e-122	429.00
IUUC-Ncr-068649	Neurospora crassa	44.77	2.00e-115	408.00
IUUC-Nle-069140	Nomascus leucogenys	58.64	5.00e-171	593.00
IUUC-Opr-070220	Ochotona princeps	53.89	2.00e-144	504.00
IUUC-Ont-072643	Oreochromis niloticus	58.77	4.00e-166	576.00
IUUC-Ocu-074007	Oryctolagus cuniculus	59.06	1.00e-167	581.00
IUUC-Oba-075904	Oryza barthii	81.17	0.00e+00	807.00
IUUC-Obr-076618	Oryza brachyantha	79.83	0.00e+00	811.00
IUUC-Ogl-077425	Oryza glaberrima	80.74	0.00e+00	805.00
IUUC-Ogu-078586	Oryza glumaepatula	79.79	0.00e+00	810.00
IUUC-Oin-079489	Oryza indica	79.00	0.00e+00	778.00
IUUC-Olo-080766	Oryza longistaminata	80.91	0.00e+00	806.00
IUUC-Ome-081905	Oryza meridionalis	79.00	0.00e+00	808.00
IUUC-Oni-083022	Oryza nivara	81.17	0.00e+00	808.00
IUUC-Opu-083615	Oryza punctata	81.39	0.00e+00	808.00
IUUC-Oru-085076	Oryza rufipogon	81.17	0.00e+00	808.00
IUUC-Osa-085516	Oryza sativa	81.17	0.00e+00	808.00
IUUC-Ola-087290	Oryzias latipes	57.32	7.00e-165	572.00
IUUC-Olu-087898	Ostreococcus lucimarinus	57.20	5.00e-166	576.00
IUUC-Oga-088980	Otolemur garnettii	57.78	6.00e-170	589.00
IUUC-Oar-089580	Ovis aries	56.02	4.00e-141	493.00
IUUC-Ptr-090845	Pan troglodytes	58.21	9.00e-169	585.00
IUUC-Pan-092836	Papio anubis	58.85	6.00e-172	596.00
IUUC-Pma-094425	Petromyzon marinus	28.34	2.00e-34	139.00
IUUC-Pno-095052	Phaeosphaeria nodorum	49.46	2.00e-128	451.00
IUUC-Ppa-095432	Physcomitrella patens	75.53	0.00e+00	773.00
IUUC-Pfo-096963	Poecilia formosa	52.64	5.00e-140	489.00
IUUC-Pab-097716	Pongo abelii	56.08	3.00e-161	560.00
IUUC-Pop-099224	Populus trichocarpa	90.85	0.00e+00	895.00
IUUC-Pca-100682	Procavia capensis	60.73	8.00e-131	459.00
IUUC-Ppe-101819	Prunus persica	88.68	0.00e+00	884.00
IUUC-Pva-102338	Pteropus vampyrus	54.40	1.00e-118	418.00
IUUC-Pgr-103583	Puccinia graminis	53.47	2.00e-129	454.00
IUUC-Ptt-103737	Puccinia triticina	37.43	2.00e-94	338.00
IUUC-Pte-104150	Pyrenophora teres	50.11	2.00e-124	438.00
IUUC-Pyt-104606	Pyrenophora triticirepentis	50.11	1.00e-124	439.00
IUUC-Rno-105987	Rattus norvegicus	58.00	3.00e-170	590.00
IUUC-Sce-106315	Saccharomyces cerevisiae	55.22	8.00e-138	482.00
IUUC-Sha-107273	Sarcophilus harrisii	58.85	2.00e-171	594.00
IUUC-Sja-107677	Schizosaccharomyces japonicus	46.11	2.00e-122	432.00
IUUC-Spo-108092	Schizosaccharomyces pombe	48.38	7.00e-124	436.00
IUUC-Ssl-108442	Sclerotinia sclerotiorum	45.87	2.00e-123	434.00
IUUC-Smo-108855	Selaginella moellendorffii	70.00	0.00e+00	721.00
IUUC-Sit-110329	Setaria italica	79.87	0.00e+00	808.00
IUUC-Sly-111830	Solanum lycopersicum	89.01	0.00e+00	876.00
IUUC-Stu-112603	Solanum tuberosum	89.01	0.00e+00	875.00
IUUC-Sar-113504	Sorex araneus	50.00	2.00e-39	155.00
IUUC-Sbi-114560	Sorghum bicolor	77.94	0.00e+00	788.00
IUUC-Sre-115133	Sporisorium reilianum	41.00	2.00e-128	451.00
IUUC-Ssc-115903	Sus scrofa	58.00	9.00e-170	588.00
IUUC-Tgu-116798	Taeniopygia guttata	57.14	1.00e-164	572.00
IUUC-Tru-118361	Takifugu rubripes	57.51	4.00e-166	576.00
IUUC-Tsy-118849	Tarsius syrichta	58.24	2.00e-169	587.00
IUUC-Tni-120094	Tetraodon nigroviridis	57.72	1.00e-166	578.00
IUUC-Tca-121634	Theobroma cacao	90.15	0.00e+00	892.00
IUUC-Tre-122051	Trichoderma reesei	47.50	3.00e-115	407.00
IUUC-Tvi-122322	Trichoderma virens	48.29	1.00e-117	415.00
IUUC-Tae-123133	Triticum aestivum	78.54	0.00e+00	791.00
IUUC-Tur-126766	Triticum urartu	69.85	0.00e+00	760.00
IUUC-Tme-127175	Tuber melanosporum	50.51	1.00e-138	485.00
IUUC-Tbe-127779	Tupaia belangeri	60.42	2.00e-157	547.00
IUUC-Ttr-128224	Tursiops truncatus	58.64	2.00e-155	540.00
IUUC-Uma-129537	Ustilago maydis	40.53	6.00e-128	450.00
IUUC-Vda-129927	Verticillium dahliae	44.67	2.00e-113	401.00
IUUC-Vpa-130658	Vicugna pacos	53.38	2.00e-86	311.00
IUUC-Xtr-132918	Xenopus tropicalis	54.07	1.00e-155	542.00
IUUC-Xma-133700	Xiphophorus maculatus	58.77	1.00e-166	578.00
IUUC-Yli-134478	Yarrowia lipolytica	49.79	2.00e-136	478.00
IUUC-Zma-135835	Zea mays	74.24	0.00e+00	776.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence