iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095537

UUCD1 version

UUC-PhP-00082

Ensembl Protein ID

PP1S91_74V6.1

UniProt Accession

E1C9V3; A9SLJ4; C3VP81; E1C9V3_PHYPA

Genbank Protein ID

ACQ55239.1; AFF18619.1; AFF18620.1; EDQ67952.1

Protein Name

PHYSCODILLO1; PHYSCODILLO1A; PHYSCODILLO1B; Predicted protein

Genbank Nucleotide ID

FJ883473; JQ290353; JQ290353; DS544980

Gene Name

PHYSCODILLO1A; PHYSCODILLO1B; PHYPADRAFT_186256

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S91_74V6	PP1S91_74V6.1	PP1S91_74V6.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	64.59	0.00e+00	949.00	IUUC-Ath-006917

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MQMTQIIGGA ADDMSNKRRR NVNVAVDDQE QQQAVVYKKA RITSSPTSSA ASTCGAPAVP 60
ATESGVESDA GRDAHWTSLP DETVLGLFNL LNHRDRASLA SVCKGWQVLG SSPSLWNSLD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAAATGA CACAGATCAT CGGAGGAGCA GCTGATGACA TGTCCAACAA GCGGCGGCGC 60
AATGTCAATG TGGCGGTGGA CGATCAGGAG CAGCAGCAGG CTGTTGTATA TAAGAAAGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR001810--F-box_dom
IPR032675--L_dom-like

PROSITE

PS50176--ARM_REPEAT
PS50181--FBOX

Pfam

PF00514--Arm
PF12937--F-box-like

SMART

SM00185--ARM

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus

KEGG

ppp:PHYPADRAFT_186256

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000414	Aegilops tauschii	63.39	1.00e-144	506.00
IUUC-Atr-002711	Amborella trichopoda	65.17	0.00e+00	1005.00
IUUC-Aly-006252	Arabidopsis lyrata	64.93	0.00e+00	986.00
IUUC-Ath-006917	Arabidopsis thaliana	63.59	0.00e+00	990.00
IUUC-Bdi-014068	Brachypodium distachyon	61.55	0.00e+00	824.00
IUUC-Bol-015524	Brassica oleracea	64.15	0.00e+00	989.00
IUUC-Bra-016626	Brassica rapa	64.13	0.00e+00	1000.00
IUUC-Dor-030505	Dipodomys ordii	25.38	7.00e-07	47.80
IUUC-Ete-032234	Echinops telfairi	38.71	2.00e-07	49.30
IUUC-Eca-033944	Equus caballus	25.42	1.00e-11	63.90
IUUC-Eeu-035008	Erinaceus europaeus	25.93	1.00e-09	56.60
IUUC-Fca-035412	Felis catus	26.07	2.00e-11	62.80
IUUC-Gma-042966	Glycine max	65.31	0.00e+00	914.00
IUUC-Hvu-047326	Hordeum vulgare	62.30	0.00e+00	762.00
IUUC-Lpe-051066	Leersia perrieri	57.97	0.00e+00	752.00
IUUC-Laf-053563	Loxodonta africana	25.83	9.00e-12	63.90
IUUC-Mtr-057820	Medicago truncatula	63.54	0.00e+00	882.00
IUUC-Mmr-060660	Microcebus murinus	25.75	8.00e-12	64.30
IUUC-Mac-065669	Musa acuminata	65.61	0.00e+00	956.00
IUUC-Nle-069823	Nomascus leucogenys	25.75	6.00e-11	61.20
IUUC-Oba-075240	Oryza barthii	63.55	0.00e+00	759.00
IUUC-Obr-076479	Oryza brachyantha	71.40	0.00e+00	651.00
IUUC-Ogl-077859	Oryza glaberrima	62.02	0.00e+00	840.00
IUUC-Ogu-078740	Oryza glumaepatula	61.05	0.00e+00	741.00
IUUC-Oin-079442	Oryza indica	72.84	0.00e+00	645.00
IUUC-Olo-080928	Oryza longistaminata	57.65	0.00e+00	646.00
IUUC-Ome-081689	Oryza meridionalis	62.13	0.00e+00	838.00
IUUC-Oni-083118	Oryza nivara	60.56	0.00e+00	829.00
IUUC-Opu-083603	Oryza punctata	60.44	0.00e+00	826.00
IUUC-Oru-085225	Oryza rufipogon	58.89	0.00e+00	828.00
IUUC-Osa-085817	Oryza sativa	71.80	0.00e+00	648.00
IUUC-Pop-099168	Populus trichocarpa	65.35	0.00e+00	938.00
IUUC-Pca-100100	Procavia capensis	28.34	3.00e-10	58.50
IUUC-Ppe-102089	Prunus persica	66.33	0.00e+00	961.00
IUUC-Smo-109321	Selaginella moellendorffii	70.26	0.00e+00	1056.00
IUUC-Sit-110607	Setaria italica	60.27	0.00e+00	810.00
IUUC-Sly-111773	Solanum lycopersicum	65.02	0.00e+00	738.00
IUUC-Sbi-114140	Sorghum bicolor	61.09	0.00e+00	826.00
IUUC-Tsy-119074	Tarsius syrichta	25.10	7.00e-09	54.30
IUUC-Tca-121125	Theobroma cacao	66.63	0.00e+00	959.00
IUUC-Tae-125154	Triticum aestivum	61.61	0.00e+00	840.00
IUUC-Tur-126716	Triticum urartu	63.66	0.00e+00	644.00
IUUC-Vvi-131526	Vitis vinifera	65.56	0.00e+00	950.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence