iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-132339

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

PDZ domain-containing ring finger 3

Genbank Nucleotide ID

AAMC01080342

Gene Name

pdzrn3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000000401.3	ENSXETT00000000855.3	ENSXETP00000000855.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.70e-07	31.4	12	74

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrli 65
           v ++f+C + + + +dP ++p+G+++ + ++  w+ ++g+ cPv  q+++ ++l   l l++li
   Q: 12   VDPDFKCNLCNRVLEDPLTTPCGHVFCAGCVLPWVVQQGS-CPVKCQRISAKELNHVLPLKSLI 74
           5689***********************************9.*************9999999998 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MGFELDRFSG EVDPDFKCNL CNRVLEDPLT TPCGHVFCAG CVLPWVVQQG SCPVKCQRIS 60
AKELNHVLPL KSLILKLDIK CDNYSRGCDK VVKLQSLAEH AEMCDFSPAK CRNKGCNEVL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCTTTG AACTGGATCG TTTCAGCGGG GAGGTGGACC CCGACTTCAA ATGCAACTTG 60
TGCAACAGGG TGCTGGAGGA CCCCCTGACC ACCCCCTGCG GGCATGTCTT CTGCGCAGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001478--PDZ
IPR008974--TRAF-like
IPR003613--Ubox_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50106--PDZ
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00595--PDZ

SMART

SM00228--PDZ
SM00184--RING
SM00504--Ubox

Gene Ontology

GO:0031594--C:neuromuscular junction
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0007528--P:neuromuscular junction development

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001910	Ailuropoda melanoleuca	76.15	0.00e+00	1302.00
IUUC-Apl-003623	Anas platyrhynchos	82.31	0.00e+00	1295.00
IUUC-Ame-011171	Astyanax mexicanus	48.61	0.00e+00	750.00
IUUC-Bta-012364	Bos taurus	75.65	0.00e+00	1557.00
IUUC-Cja-019726	Callithrix jacchus	79.25	0.00e+00	1279.00
IUUC-Cfa-020196	Canis familiaris	30.00	1.00e-23	102.00
IUUC-Cpo-021680	Cavia porcellus	74.93	0.00e+00	1533.00
IUUC-Csa-023684	Chlorocebus sabaeus	76.80	0.00e+00	1598.00
IUUC-Cho-024555	Choloepus hoffmanni	85.58	2.00e-91	330.00
IUUC-Cme-027215	Cyanidioschyzon merolae	50.88	3.00e-09	56.20
IUUC-Dre-027462	Danio rerio	72.94	0.00e+00	1497.00
IUUC-Dno-029974	Dasypus novemcinctus	82.93	2.00e-39	154.00
IUUC-Dor-031125	Dipodomys ordii	73.54	0.00e+00	1441.00
IUUC-Ete-032745	Echinops telfairi	65.10	0.00e+00	689.00
IUUC-Eca-034276	Equus caballus	79.39	0.00e+00	1289.00
IUUC-Fca-036189	Felis catus	32.73	7.00e-24	103.00
IUUC-Fal-037334	Ficedula albicollis	78.29	0.00e+00	1552.00
IUUC-Gmo-038706	Gadus morhua	70.57	0.00e+00	1417.00
IUUC-Gga-040586	Gallus gallus	80.85	0.00e+00	1618.00
IUUC-Gac-041605	Gasterosteus aculeatus	69.14	0.00e+00	1401.00
IUUC-Ggo-044706	Gorilla gorilla	77.08	0.00e+00	1610.00
IUUC-Hsa-046677	Homo sapiens	76.89	0.00e+00	1605.00
IUUC-Itr-048660	Ictidomys tridecemlineatus	72.41	0.00e+00	1481.00
IUUC-Lch-049637	Latimeria chalumnae	80.92	1.00e-153	535.00
IUUC-Loc-052305	Lepisosteus oculatus	78.59	0.00e+00	1610.00
IUUC-Mcc-055573	Macaca mulatta	76.99	0.00e+00	1605.00
IUUC-Meu-056805	Macropus eugenii	78.73	0.00e+00	1574.00
IUUC-Mdo-062581	Monodelphis domestica	81.43	0.00e+00	1655.00
IUUC-Mmu-063597	Mus musculus	76.54	0.00e+00	1588.00
IUUC-Mpu-065685	Mustela putorius furo	78.09	0.00e+00	1199.00
IUUC-Mlu-067150	Myotis lucifugus	65.12	0.00e+00	898.00
IUUC-Nle-068997	Nomascus leucogenys	76.85	0.00e+00	1578.00
IUUC-Ont-071534	Oreochromis niloticus	71.35	0.00e+00	1413.00
IUUC-Ola-086381	Oryzias latipes	70.24	0.00e+00	1422.00
IUUC-Oga-089068	Otolemur garnettii	76.22	0.00e+00	1556.00
IUUC-Oar-089252	Ovis aries	65.19	1.00e-106	379.00
IUUC-Pan-092366	Papio anubis	76.89	0.00e+00	1604.00
IUUC-Psi-093611	Pelodiscus sinensis	53.44	1.00e-85	308.00
IUUC-Pfo-096576	Poecilia formosa	72.03	3.00e-135	474.00
IUUC-Pab-098239	Pongo abelii	77.27	0.00e+00	1615.00
IUUC-Pca-100484	Procavia capensis	75.62	0.00e+00	726.00
IUUC-Pva-103202	Pteropus vampyrus	51.17	0.00e+00	889.00
IUUC-Rno-105931	Rattus norvegicus	76.54	0.00e+00	1593.00
IUUC-Tgu-116615	Taeniopygia guttata	76.07	4.00e-120	423.00
IUUC-Tru-118175	Takifugu rubripes	71.62	0.00e+00	1468.00
IUUC-Tsy-119569	Tarsius syrichta	73.89	0.00e+00	1213.00
IUUC-Tbe-127819	Tupaia belangeri	74.46	0.00e+00	1196.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence