iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099118

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

ATP-dependent protease La domain-containing family protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTRDRAFT_819532; POPTR_0006s25270g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s25270	POPTR_0006s25270.1	POPTR_0006s25270.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/Other	36.75	5.00e-42	170.00	IUUC-Hsa-046888

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDDVRILEAE RRRIQELEFE ELQVEEEVDG RDSTGAGSSD DFTFNPCLAS LHTYLGEVED 60
THHRLAFLDG GAVLNLPLFY LEGVVLFPEA TLPLRVVQPN FISAVERALV QVDNPFIVGV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCACATTCTT CTGGAACTTG CCTGTTGCAA TTTGTAATGG CGGGTACATA ATAAACGACC 60
AAAAAATAAT AAAAATTAAA ATCGTATTGC TTCTTTCTCG CACAAAACAC CACTAACAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0862--Zinc

Interpro

IPR034750--CULT
IPR003111--Lon_substr-bd
IPR015947--PUA-like_domain
IPR004910--Yippee/Mis18/Cereblon

PROSITE

PS51788--CULT
PS51787--LON_N

Pfam

PF02190--LON_substr_bdg
PF03226--Yippee-Mis18

SMART

SM00464--LON

Gene Ontology

GO:0046872--F:metal ion binding
GO:0008233--F:peptidase activity

KEGG

pop:POPTR_0006s25270g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000549	Aegilops tauschii	40.62	2.00e-93	335.00
IUUC-Aml-002159	Ailuropoda melanoleuca	38.14	3.00e-43	168.00
IUUC-Atr-002820	Amborella trichopoda	55.97	2.00e-156	545.00
IUUC-Apl-003508	Anas platyrhynchos	37.38	5.00e-40	158.00
IUUC-Aca-004675	Anolis carolinensis	41.80	3.00e-41	162.00
IUUC-Aly-005404	Arabidopsis lyrata	59.80	6.00e-173	600.00
IUUC-Ath-006819	Arabidopsis thaliana	59.32	2.00e-161	561.00
IUUC-Ame-010773	Astyanax mexicanus	39.89	1.00e-38	153.00
IUUC-Bta-012711	Bos taurus	37.85	4.00e-43	168.00
IUUC-Bdi-014416	Brachypodium distachyon	46.01	5.00e-117	414.00
IUUC-Bol-015668	Brassica oleracea	61.19	9.00e-178	615.00
IUUC-Bra-016836	Brassica rapa	59.21	2.00e-168	585.00
IUUC-Cja-019624	Callithrix jacchus	36.75	5.00e-43	168.00
IUUC-Cpo-022319	Cavia porcellus	37.21	7.00e-42	164.00
IUUC-Csa-023791	Chlorocebus sabaeus	37.67	1.00e-43	170.00
IUUC-Cho-024850	Choloepus hoffmanni	33.71	3.00e-27	115.00
IUUC-Csv-025832	Ciona savignyi	41.49	2.00e-36	146.00
IUUC-Dre-028071	Danio rerio	39.30	5.00e-42	164.00
IUUC-Dno-029431	Dasypus novemcinctus	37.67	4.00e-43	168.00
IUUC-Dor-030571	Dipodomys ordii	41.27	2.00e-42	166.00
IUUC-Dme-031920	Drosophila melanogaster	28.80	1.00e-22	101.00
IUUC-Eca-033462	Equus caballus	37.67	3.00e-42	165.00
IUUC-Fca-036279	Felis catus	36.67	2.00e-43	169.00
IUUC-Fal-037498	Ficedula albicollis	36.62	2.00e-39	156.00
IUUC-Gmo-038734	Gadus morhua	36.36	3.00e-37	149.00
IUUC-Gga-040615	Gallus gallus	39.00	3.00e-41	162.00
IUUC-Gac-041426	Gasterosteus aculeatus	38.68	9.00e-43	167.00
IUUC-Gma-043891	Glycine max	57.26	1.00e-149	522.00
IUUC-Ggo-045108	Gorilla gorilla	37.21	2.00e-43	169.00
IUUC-Hsa-046888	Homo sapiens	37.67	1.00e-43	170.00
IUUC-Itr-047937	Ictidomys tridecemlineatus	38.14	4.00e-43	168.00
IUUC-Lch-050189	Latimeria chalumnae	37.73	8.00e-42	164.00
IUUC-Lpe-050808	Leersia perrieri	51.37	1.00e-138	486.00
IUUC-Loc-051762	Lepisosteus oculatus	39.23	5.00e-41	161.00
IUUC-Laf-053882	Loxodonta africana	37.61	2.00e-44	172.00
IUUC-Mcc-054883	Macaca mulatta	37.67	1.00e-43	170.00
IUUC-Mtr-058216	Medicago truncatula	59.27	2.00e-168	585.00
IUUC-Mdo-062260	Monodelphis domestica	38.21	4.00e-43	168.00
IUUC-Mmu-063438	Mus musculus	37.21	2.00e-42	166.00
IUUC-Mac-064610	Musa acuminata	54.92	8.00e-145	506.00
IUUC-Mpu-066362	Mustela putorius furo	38.14	5.00e-43	167.00
IUUC-Nle-069908	Nomascus leucogenys	37.67	1.00e-43	170.00
IUUC-Ont-072223	Oreochromis niloticus	41.12	2.00e-42	166.00
IUUC-Ocu-074151	Oryctolagus cuniculus	37.67	5.00e-43	167.00
IUUC-Oba-075882	Oryza barthii	50.79	7.00e-139	486.00
IUUC-Obr-076670	Oryza brachyantha	51.20	5.00e-135	474.00
IUUC-Ogl-077753	Oryza glaberrima	50.79	7.00e-139	486.00
IUUC-Ogu-078786	Oryza glumaepatula	50.79	2.00e-138	485.00
IUUC-Oin-079191	Oryza indica	50.59	9.00e-138	483.00
IUUC-Olo-080357	Oryza longistaminata	50.10	2.00e-135	475.00
IUUC-Ome-081227	Oryza meridionalis	38.36	6.00e-82	297.00
IUUC-Oni-082557	Oryza nivara	50.20	3.00e-136	478.00
IUUC-Opu-083920	Oryza punctata	50.53	3.00e-124	437.00
IUUC-Oru-085227	Oryza rufipogon	51.00	2.00e-138	485.00
IUUC-Ola-087321	Oryzias latipes	37.90	2.00e-39	156.00
IUUC-Oga-088413	Otolemur garnettii	38.14	6.00e-43	167.00
IUUC-Oar-089512	Ovis aries	37.67	7.00e-43	167.00
IUUC-Ptr-090764	Pan troglodytes	37.67	1.00e-43	170.00
IUUC-Pan-091942	Papio anubis	37.67	1.00e-43	170.00
IUUC-Psi-092985	Pelodiscus sinensis	40.10	3.00e-41	162.00
IUUC-Ppa-095670	Physcomitrella patens	53.15	5.00e-70	258.00
IUUC-Pfo-097251	Poecilia formosa	41.80	5.00e-41	161.00
IUUC-Pab-097842	Pongo abelii	37.67	9.00e-44	170.00
IUUC-Pca-101077	Procavia capensis	43.12	4.00e-36	145.00
IUUC-Ppe-101706	Prunus persica	66.67	0.00e+00	704.00
IUUC-Pva-102245	Pteropus vampyrus	25.12	6.00e-20	90.90
IUUC-Rno-105788	Rattus norvegicus	37.67	1.00e-42	166.00
IUUC-Smo-109165	Selaginella moellendorffii	45.74	3.00e-112	398.00
IUUC-Sit-109818	Setaria italica	51.09	2.00e-138	484.00
IUUC-Sly-111062	Solanum lycopersicum	60.92	0.00e+00	634.00
IUUC-Sbi-114298	Sorghum bicolor	51.08	2.00e-137	481.00
IUUC-Ssc-115779	Sus scrofa	33.71	8.00e-28	117.00
IUUC-Tgu-117378	Taeniopygia guttata	39.09	3.00e-41	162.00
IUUC-Tru-118515	Takifugu rubripes	39.63	3.00e-42	165.00
IUUC-Tsy-119555	Tarsius syrichta	36.74	3.00e-40	158.00
IUUC-Tni-119679	Tetraodon nigroviridis	41.71	8.00e-44	170.00
IUUC-Tca-121374	Theobroma cacao	62.15	1.00e-167	582.00
IUUC-Tae-123098	Triticum aestivum	46.25	2.00e-116	412.00
IUUC-Tur-126689	Triticum urartu	41.77	2.00e-92	332.00
IUUC-Vpa-130719	Vicugna pacos	37.67	1.00e-42	166.00
IUUC-Vvi-131014	Vitis vinifera	68.99	0.00e+00	651.00
IUUC-Xtr-131811	Xenopus tropicalis	40.98	7.00e-40	157.00
IUUC-Xma-133238	Xiphophorus maculatus	38.89	2.00e-41	163.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence