iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-110917

Ensembl Protein ID

Solyc01g109340.2.1

UniProt Accession

K4B3E7; K4B3E7_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc01g109340.2	Solyc01g109340.2.1	Solyc01g109340.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.40e-06	29.0	23	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggk..tcPvtrqplteedlvPn 58
           +f C I +el +dP v+ +G+ y   ++ +wl+   +  +cP++++ ++e++lvP 
   Q: 23   DFECNICFELAQDPIVTLCGHLYCWPCLYEWLQVHSHshECPICKALIEEHKLVPI 78
           699*****************************54444458***************7 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MDYRAGGSLG ALHSADMNSD SGDFECNICF ELAQDPIVTL CGHLYCWPCL YEWLQVHSHS 60
HECPICKALI EEHKLVPIYG RGKASSDPRS RLRPGINIPK RPVGQRPQTA PAVDMDYLRH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCGATGGCAG GTTTTTGATT CTTGGTTTGT GGATATGGAT TATAGGGCAG GTGGATCATT 60
GGGTGCTTTG CATTCAGCAG ATATGAATTC TGACTCTGGT GATTTTGAAT GCAATATCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:0016021--C:integral component of membrane
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sly:101262966

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001417	Ailuropoda melanoleuca	52.94	5.00e-25	106.00
IUUC-Aca-004254	Anolis carolinensis	52.56	3.00e-23	99.80
IUUC-Bta-013109	Bos taurus	51.76	2.00e-24	104.00
IUUC-Cel-018228	Caenorhabditis elegans	48.98	3.00e-27	114.00
IUUC-Cja-019902	Callithrix jacchus	51.76	3.00e-24	103.00
IUUC-Cfa-020079	Canis familiaris	52.94	3.00e-25	107.00
IUUC-Cre-022829	Chlamydomonas reinhardtii	52.13	7.00e-26	107.00
IUUC-Csa-023595	Chlorocebus sabaeus	52.94	4.00e-25	106.00
IUUC-Dor-030170	Dipodomys ordii	52.94	1.00e-24	105.00
IUUC-Eca-033642	Equus caballus	52.94	2.00e-25	107.00
IUUC-Fca-036326	Felis catus	52.94	2.00e-25	107.00
IUUC-Gmo-039369	Gadus morhua	47.22	3.00e-21	93.60
IUUC-Ggo-045474	Gorilla gorilla	52.94	4.00e-25	106.00
IUUC-Hsa-046046	Homo sapiens	52.94	4.00e-25	106.00
IUUC-Itr-048037	Ictidomys tridecemlineatus	49.46	1.00e-25	108.00
IUUC-Laf-053395	Loxodonta africana	47.66	5.00e-25	106.00
IUUC-Mcc-054833	Macaca mulatta	52.94	4.00e-25	106.00
IUUC-Mdo-062437	Monodelphis domestica	49.51	7.00e-27	112.00
IUUC-Mmu-064159	Mus musculus	52.27	2.00e-25	107.00
IUUC-Mlu-067689	Myotis lucifugus	51.76	3.00e-25	107.00
IUUC-Nle-069705	Nomascus leucogenys	52.94	4.00e-25	106.00
IUUC-Ocu-074208	Oryctolagus cuniculus	51.76	1.00e-24	104.00
IUUC-Oga-088912	Otolemur garnettii	52.94	4.00e-25	106.00
IUUC-Oar-090284	Ovis aries	51.76	1.00e-24	104.00
IUUC-Ptr-090919	Pan troglodytes	52.94	4.00e-25	106.00
IUUC-Pan-092843	Papio anubis	52.94	4.00e-25	106.00
IUUC-Pab-098244	Pongo abelii	52.94	4.00e-25	106.00
IUUC-Rno-106042	Rattus norvegicus	52.27	2.00e-25	107.00
IUUC-Stu-112552	Solanum tuberosum	96.59	4.00e-119	419.00
IUUC-Ssc-115934	Sus scrofa	52.94	4.00e-25	106.00
IUUC-Tsy-119615	Tarsius syrichta	52.94	2.00e-25	107.00
IUUC-Tni-120909	Tetraodon nigroviridis	48.10	4.00e-23	100.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence