iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-108983

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377605

Gene Name

SELMODRAFT_268258

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_268258	EFJ19655	EFJ19655

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.60e-30	102.8	310	346
UBD/Beta-Prp	4.70e-47	161.3	221	511

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsdtllvsGsdDgtikvWDlrtgvllk 37
           gHt++vt+++ s+ + +s + D tik WDl tg +l+
   Q: 310  GHTEKVTSVDISNVRAASTASDRTIKTWDLQTGYSLH 346
           8**********66999**************9996665 PP

UBD/Beta-Prp

   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl.lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfs 103
           tl++h+k+ + ++ f  +++ l+t++ dg +k wd+++g +  ++l g  + v ++ + p+ ++ + g +D+ +++wd ++g   h+l+gh+++v+s+++s
   Q: 221  TLRAHDKGGCAAIIFEHSSDTLLTAGHDGIVKFWDTQRGGTpTKTLTGALGSVLDLALTPENNMVLGGCSDHKLYLWDSRSGRVKHVLTGHTEKVTSVDIS 321
           8999***********99999******************9998999******************************************************** PP
   S: 104  psgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtv 204
               + +s+ +drti+ wdl+tg+ l+    + ++  n++++++dg  + sG++D+++r+Wd +tgkl ++lt    ++++s+s++++g  +++ ++d+ +
   Q: 322  N--VRAASTASDRTIKTWDLQTGYSLH--TMIFHSNCNSLCISSDGAAICSGHTDGILRFWDTRTGKLAKELTAHEPQAITSVSLSRSGLTVLTSGKDNVL 418
           *..99*********************9..45555578999999999****************************88999********************** PP
   S: 205  klwdlqtgecvrtlnght....dnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvniwk 293
           kl+d+++ e   t++g      +  ++  +s+++++++ gs Dgs+ iW+ rs ++ ++l++ + s +  +++s+  + l++++ ++ v +w+
   Q: 419  KLFDVRSLELKATFRGPGytvaTSLSRSCLSRDENYVAAGSGDGSVCIWNRRSWEVESVLKGGHGSAVVACAWSPASKSLASADRNGVVCVWE 511
           ****************9933333344445559********************************777777778**************999996 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MPVPEERAAA AIAQACVALR RRKAVEEGAH ASLVAALDRA LTNQGTEIQE KMESLQQELS 60
QSYKTQAHVS EQLVVEMQTA QALRAQLAEK DALVLEIQHE LSSARARISQ LEKDFEAKEN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGGTGC CCGAGGAGAG AGCTGCCGCC GCCATTGCTC AAGCATGCGT TGCCCTGCGG 60
CGACGCAAGG CCGTCGAGGA AGGAGCTCAT GCATCGCTGG TCGCGGCGCT TGATCGGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR013923--Autophagy-rel_prot_16
IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08614--ATG16
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_268258

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000090	Aegilops tauschii	43.52	6.00e-105	373.00
IUUC-Aml-002242	Ailuropoda melanoleuca	26.88	2.00e-39	156.00
IUUC-Atr-003073	Amborella trichopoda	47.37	1.00e-96	345.00
IUUC-Aly-005435	Arabidopsis lyrata	47.36	1.00e-127	449.00
IUUC-Ath-006948	Arabidopsis thaliana	47.95	8.00e-131	459.00
IUUC-Bdi-014231	Brachypodium distachyon	44.22	2.00e-102	365.00
IUUC-Cfa-020484	Canis familiaris	27.64	9.00e-43	167.00
IUUC-Dor-030897	Dipodomys ordii	28.76	9.00e-40	157.00
IUUC-Dme-031595	Drosophila melanogaster	30.74	2.00e-39	156.00
IUUC-Eca-034214	Equus caballus	27.82	4.00e-36	145.00
IUUC-Gmo-039042	Gadus morhua	25.63	3.00e-35	142.00
IUUC-Gma-043452	Glycine max	51.11	3.00e-140	491.00
IUUC-Lpe-051254	Leersia perrieri	43.61	6.00e-104	370.00
IUUC-Mtr-058062	Medicago truncatula	49.49	2.00e-129	454.00
IUUC-Mac-065161	Musa acuminata	47.97	1.00e-123	436.00
IUUC-Mlu-067651	Myotis lucifugus	27.45	1.00e-42	167.00
IUUC-Nle-069853	Nomascus leucogenys	27.27	2.00e-39	156.00
IUUC-Opr-071039	Ochotona princeps	32.27	8.00e-39	154.00
IUUC-Oba-075619	Oryza barthii	43.50	2.00e-107	381.00
IUUC-Obr-076632	Oryza brachyantha	43.50	2.00e-102	365.00
IUUC-Ogl-077671	Oryza glaberrima	43.50	2.00e-107	381.00
IUUC-Ogu-078052	Oryza glumaepatula	43.70	9.00e-108	383.00
IUUC-Oin-079611	Oryza indica	43.29	1.00e-104	372.00
IUUC-Olo-080408	Oryza longistaminata	43.70	4.00e-99	354.00
IUUC-Ome-081560	Oryza meridionalis	43.70	2.00e-107	382.00
IUUC-Oni-082145	Oryza nivara	43.50	2.00e-107	381.00
IUUC-Opu-083918	Oryza punctata	43.70	2.00e-99	355.00
IUUC-Oru-084858	Oryza rufipogon	43.29	2.00e-104	372.00
IUUC-Osa-086277	Oryza sativa	43.29	1.00e-104	373.00
IUUC-Olu-087622	Ostreococcus lucimarinus	37.00	5.00e-63	233.00
IUUC-Oar-090231	Ovis aries	31.44	4.00e-35	142.00
IUUC-Ptr-091676	Pan troglodytes	27.73	2.00e-42	166.00
IUUC-Ppa-095699	Physcomitrella patens	51.66	1.00e-140	492.00
IUUC-Pop-099116	Populus trichocarpa	49.49	5.00e-137	480.00
IUUC-Ppe-101790	Prunus persica	51.01	4.00e-141	493.00
IUUC-Sit-110828	Setaria italica	45.21	1.00e-107	382.00
IUUC-Sly-111009	Solanum lycopersicum	49.47	4.00e-129	454.00
IUUC-Stu-112370	Solanum tuberosum	49.90	2.00e-138	484.00
IUUC-Sbi-114819	Sorghum bicolor	45.79	3.00e-108	384.00
IUUC-Tru-118336	Takifugu rubripes	29.43	3.00e-31	129.00
IUUC-Tca-121002	Theobroma cacao	51.53	3.00e-142	498.00
IUUC-Tae-123652	Triticum aestivum	43.52	4.00e-105	374.00
IUUC-Tur-126463	Triticum urartu	42.91	3.00e-104	371.00
IUUC-Vvi-130878	Vitis vinifera	50.71	1.00e-139	488.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence