iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

mRNA Expression
GEO	FFGED
Protein-protein Interaction
IID	iRefIndex	HINT	Mentha
Post-translational Modifications (PTMs)
dbPAF	dbPTM	UniProt	BioGRID
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	31.15	1.00e-81	302.00	IUUC-Hsa-046870

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Saccharomyces cerevisiae

Functional Description
(View)

May play a role in transcription regulation.

Protein Sequence
(Fasta)

MTEHESLGLE QNQDGGDTYR HHNLSDGCIS SVEDANEQPS SYEEESDDDM QYYERAIQEI 60
SSGDSYVCMI CTVEMDYTCQ MFACKRCYRV FDYGCIREWA LKSTEKTVDR IWKCPNCYYV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACCGAAC ATGAGTCTTT AGGCCTGGAG CAAAATCAAG ACGGCGGTGA CACTTATAGA 60
CATCACAACC TAAGCGATGG GTGTATTTCG AGTGTTGAAG ACGCCAACGA GCAGCCTAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0479--Metal-binding
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR034078--NFX1_fam
IPR001374--R3H_dom
IPR034077--R3H_FAP1
IPR000967--Znf_NFX1
IPR001841--Znf_RING

PROSITE

PS51061--R3H
PS50089--ZF_RING_2

Pfam

PF01424--R3H
PF01422--zf-NF-X1

SMART

SM00393--R3H
SM00438--ZnF_NFX

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0000977--F:RNA polymerase II regulatory region sequence-specific DNA binding
GO:0003700--F:transcription factor activity, sequence-specific DNA binding
GO:0001078--F:transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
GO:0008270--F:zinc ion binding
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0006366--P:transcription from RNA polymerase II promoter

KEGG

sce:YNL023C

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000224	Aegilops tauschii	29.74	8.00e-51	193.00
IUUC-Aml-001716	Ailuropoda melanoleuca	30.31	3.00e-81	295.00
IUUC-Atr-002895	Amborella trichopoda	28.86	3.00e-79	288.00
IUUC-Apl-003650	Anas platyrhynchos	30.30	3.00e-85	308.00
IUUC-Aca-004313	Anolis carolinensis	30.83	2.00e-94	338.00
IUUC-Aly-006515	Arabidopsis lyrata	30.54	1.00e-79	289.00
IUUC-Ath-007056	Arabidopsis thaliana	30.90	9.00e-80	290.00
IUUC-Ago-007777	Ashbya gossypii	49.94	0.00e+00	864.00
IUUC-Acl-008068	Aspergillus clavatus	33.78	3.00e-78	285.00
IUUC-Afl-008499	Aspergillus flavus	33.71	3.00e-45	174.00
IUUC-Afu-009016	Aspergillus fumigatus	34.40	9.00e-106	376.00
IUUC-Ani-009477	Aspergillus nidulans	33.62	9.00e-106	376.00
IUUC-Ang-009605	Aspergillus niger	34.24	3.00e-110	391.00
IUUC-Aor-010166	Aspergillus oryzae	33.25	2.00e-55	208.00
IUUC-Ame-010640	Astyanax mexicanus	29.02	9.00e-88	316.00
IUUC-Bgr-012024	Blumeria graminis	31.13	9.00e-104	369.00
IUUC-Bta-012789	Bos taurus	29.91	8.00e-84	303.00
IUUC-Bci-013768	Botrytis cinerea	31.66	1.00e-108	386.00
IUUC-Bdi-014723	Brachypodium distachyon	30.21	5.00e-72	264.00
IUUC-Bol-015394	Brassica oleracea	31.51	9.00e-83	300.00
IUUC-Bra-017266	Brassica rapa	30.82	4.00e-81	294.00
IUUC-Cel-018668	Caenorhabditis elegans	29.40	1.00e-84	306.00
IUUC-Cja-019769	Callithrix jacchus	30.57	7.00e-80	290.00
IUUC-Cfa-020727	Canis familiaris	30.31	1.00e-80	293.00
IUUC-Cpo-021741	Cavia porcellus	30.73	1.00e-83	302.00
IUUC-Csa-024054	Chlorocebus sabaeus	31.40	2.00e-80	292.00
IUUC-Cho-025031	Choloepus hoffmanni	28.41	9.00e-68	249.00
IUUC-Cin-025164	Ciona intestinalis	30.42	4.00e-78	284.00
IUUC-Csv-026260	Ciona savignyi	30.55	6.00e-89	320.00
IUUC-Cgl-026451	Colletotrichum gloeosporioides	33.69	9.00e-77	280.00
IUUC-Cne-026923	Cryptococcus neoformans	32.94	9.00e-65	239.00
IUUC-Dre-028227	Danio rerio	31.94	3.00e-89	321.00
IUUC-Dno-029830	Dasypus novemcinctus	29.28	2.00e-74	272.00
IUUC-Dor-030436	Dipodomys ordii	26.45	2.00e-45	176.00
IUUC-Dse-031485	Dothistroma septosporum	30.90	3.00e-103	368.00
IUUC-Dme-031875	Drosophila melanogaster	29.34	9.00e-74	270.00
IUUC-Eca-033415	Equus caballus	31.56	9.00e-28	116.00
IUUC-Eeu-034528	Erinaceus europaeus	29.79	3.00e-54	205.00
IUUC-Fca-036238	Felis catus	31.10	7.00e-79	286.00
IUUC-Fal-037124	Ficedula albicollis	30.60	1.00e-89	322.00
IUUC-Fox-038075	Fusarium oxysporum	27.37	4.00e-10	58.50
IUUC-Fso-038310	Fusarium solani	32.67	2.00e-92	332.00
IUUC-Gmo-039506	Gadus morhua	31.08	2.00e-90	324.00
IUUC-Ggr-039984	Gaeumannomyces graminis	35.20	6.00e-114	403.00
IUUC-Gga-040674	Gallus gallus	31.48	4.00e-80	290.00
IUUC-Gac-041416	Gasterosteus aculeatus	29.52	7.00e-80	289.00
IUUC-Gma-043625	Glycine max	31.19	1.00e-77	283.00
IUUC-Ggo-045017	Gorilla gorilla	30.58	2.00e-81	295.00
IUUC-Hsa-046870	Homo sapiens	30.77	7.00e-82	296.00
IUUC-Hvu-047466	Hordeum vulgare	29.01	4.00e-46	177.00
IUUC-Itr-048703	Ictidomys tridecemlineatus	34.18	1.00e-08	52.40
IUUC-Kpa-049244	Komagataella pastoris	34.03	7.00e-119	419.00
IUUC-Lch-050376	Latimeria chalumnae	31.08	3.00e-88	318.00
IUUC-Lpe-050955	Leersia perrieri	29.18	1.00e-52	199.00
IUUC-Loc-051948	Lepisosteus oculatus	31.72	7.00e-93	333.00
IUUC-Lma-052950	Leptosphaeria maculans	33.72	8.00e-102	363.00
IUUC-Laf-054206	Loxodonta africana	29.47	5.00e-39	154.00
IUUC-Mcc-055005	Macaca mulatta	31.40	4.00e-80	291.00
IUUC-Meu-056120	Macropus eugenii	33.86	1.00e-40	160.00
IUUC-Mor-057238	Magnaporthe oryzae	34.97	1.00e-106	379.00
IUUC-Mpo-057574	Magnaporthe poae	35.21	3.00e-111	394.00
IUUC-Mtr-057823	Medicago truncatula	28.34	4.00e-69	254.00
IUUC-Mla-058822	Melampsora laricipopulina	32.20	7.00e-98	349.00
IUUC-Mga-059785	Meleagris gallopavo	31.07	4.00e-44	171.00
IUUC-Mvi-060543	Microbotryum violaceum	29.70	5.00e-98	350.00
IUUC-Mmr-060611	Microcebus murinus	29.74	7.00e-76	276.00
IUUC-Mdo-062719	Monodelphis domestica	31.43	3.00e-89	321.00
IUUC-Mmu-064376	Mus musculus	29.60	7.00e-75	273.00
IUUC-Mac-064834	Musa acuminata	27.87	3.00e-66	244.00
IUUC-Mpu-066298	Mustela putorius furo	30.10	8.00e-82	296.00
IUUC-Mlu-067546	Myotis lucifugus	30.05	1.00e-83	302.00
IUUC-Nfi-068388	Neosartorya fischeri	34.15	4.00e-111	394.00
IUUC-Ncr-068875	Neurospora crassa	34.10	2.00e-102	365.00
IUUC-Nle-069813	Nomascus leucogenys	30.64	4.00e-82	297.00
IUUC-Opr-070995	Ochotona princeps	30.48	1.00e-81	296.00
IUUC-Ont-072084	Oreochromis niloticus	29.84	3.00e-84	304.00
IUUC-Oan-073545	Ornithorhynchus anatinus	29.48	2.00e-79	288.00
IUUC-Ocu-074092	Oryctolagus cuniculus	28.59	4.00e-73	268.00
IUUC-Oba-075828	Oryza barthii	30.83	1.00e-68	253.00
IUUC-Obr-076373	Oryza brachyantha	30.21	8.00e-51	193.00
IUUC-Ogl-077043	Oryza glaberrima	30.90	4.00e-71	260.00
IUUC-Ogu-078647	Oryza glumaepatula	30.87	7.00e-69	253.00
IUUC-Oin-079793	Oryza indica	31.29	2.00e-54	205.00
IUUC-Olo-080815	Oryza longistaminata	31.12	7.00e-68	250.00
IUUC-Ome-081650	Oryza meridionalis	30.31	2.00e-72	265.00
IUUC-Oni-082708	Oryza nivara	30.34	7.00e-71	260.00
IUUC-Opu-084078	Oryza punctata	30.72	8.00e-69	253.00
IUUC-Oru-084549	Oryza rufipogon	30.45	1.00e-71	262.00
IUUC-Osa-086095	Oryza sativa	30.92	1.00e-62	232.00
IUUC-Olu-087617	Ostreococcus lucimarinus	24.73	2.00e-05	42.40
IUUC-Oga-088453	Otolemur garnettii	30.23	2.00e-79	288.00
IUUC-Oar-089769	Ovis aries	29.75	2.00e-83	301.00
IUUC-Ptr-090803	Pan troglodytes	30.77	7.00e-82	296.00
IUUC-Pan-092169	Papio anubis	31.01	6.00e-85	306.00
IUUC-Psi-094065	Pelodiscus sinensis	32.41	2.00e-95	342.00
IUUC-Pma-094592	Petromyzon marinus	30.05	3.00e-75	274.00
IUUC-Pno-095016	Phaeosphaeria nodorum	33.63	4.00e-10	57.00
IUUC-Ppa-095597	Physcomitrella patens	30.25	6.00e-81	294.00
IUUC-Pfo-096959	Poecilia formosa	29.05	5.00e-83	300.00
IUUC-Pab-097732	Pongo abelii	30.74	6.00e-66	243.00
IUUC-Pop-099062	Populus trichocarpa	28.94	7.00e-74	270.00
IUUC-Pca-100219	Procavia capensis	27.26	6.00e-41	160.00
IUUC-Ppe-101695	Prunus persica	29.54	1.00e-71	263.00
IUUC-Pva-102402	Pteropus vampyrus	29.32	2.00e-63	236.00
IUUC-Pgr-103317	Puccinia graminis	29.09	1.00e-79	289.00
IUUC-Ptt-103771	Puccinia triticina	28.83	2.00e-75	275.00
IUUC-Pte-104189	Pyrenophora teres	32.81	2.00e-12	65.50
IUUC-Pyt-104801	Pyrenophora triticirepentis	32.55	8.00e-100	356.00
IUUC-Rno-105721	Rattus norvegicus	30.35	1.00e-81	296.00
IUUC-Sha-106801	Sarcophilus harrisii	29.92	1.00e-93	335.00
IUUC-Sja-107692	Schizosaccharomyces japonicus	32.97	7.00e-104	370.00
IUUC-Spo-108253	Schizosaccharomyces pombe	34.40	1.00e-112	399.00
IUUC-Ssl-108587	Sclerotinia sclerotiorum	35.12	2.00e-64	238.00
IUUC-Smo-108865	Selaginella moellendorffii	29.75	2.00e-65	241.00
IUUC-Sit-110153	Setaria italica	29.35	1.00e-70	259.00
IUUC-Sly-111638	Solanum lycopersicum	29.27	3.00e-73	268.00
IUUC-Stu-112099	Solanum tuberosum	29.62	6.00e-74	270.00
IUUC-Sar-113030	Sorex araneus	30.54	7.00e-33	134.00
IUUC-Sbi-113944	Sorghum bicolor	29.26	2.00e-73	268.00
IUUC-Sre-115206	Sporisorium reilianum	30.38	1.00e-104	372.00
IUUC-Ssc-115729	Sus scrofa	33.33	4.00e-09	53.90
IUUC-Tgu-117520	Taeniopygia guttata	29.05	6.00e-66	243.00
IUUC-Tru-118487	Takifugu rubripes	30.56	1.00e-82	298.00
IUUC-Tsy-119363	Tarsius syrichta	26.27	2.00e-50	192.00
IUUC-Tca-121813	Theobroma cacao	29.35	1.00e-68	253.00
IUUC-Tre-122248	Trichoderma reesei	31.12	7.00e-101	359.00
IUUC-Tvi-122462	Trichoderma virens	32.14	3.00e-108	384.00
IUUC-Tae-123637	Triticum aestivum	31.44	3.00e-64	238.00
IUUC-Tur-126173	Triticum urartu	30.09	4.00e-62	231.00
IUUC-Tme-127213	Tuber melanosporum	33.12	5.00e-113	400.00
IUUC-Tbe-127399	Tupaia belangeri	29.55	5.00e-46	177.00
IUUC-Ttr-128798	Tursiops truncatus	30.39	7.00e-48	184.00
IUUC-Uma-129421	Ustilago maydis	30.40	3.00e-103	368.00
IUUC-Vda-129863	Verticillium dahliae	29.50	1.00e-95	342.00
IUUC-Vpa-130452	Vicugna pacos	30.00	2.30e-01	28.50
IUUC-Vvi-131615	Vitis vinifera	29.77	2.00e-84	305.00
IUUC-Xtr-132309	Xenopus tropicalis	32.30	1.00e-87	316.00
IUUC-Xma-133235	Xiphophorus maculatus	28.98	7.00e-80	290.00
IUUC-Yli-134536	Yarrowia lipolytica	36.81	5.00e-121	426.00
IUUC-Zma-135358	Zea mays	29.55	2.00e-66	245.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence