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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Ath-007212
UUCD1 version UUC-ArT-00127
Ensembl Protein ID AT1G35625.1
UniProt Accession F4HZZ4; RMR6_ARATH
Genbank Protein ID AEE31819.2
Protein Name Receptor homology region, transmembrane domain- and RING domain-containing protein 6
Genbank Nucleotide ID AC007887
Gene Name RMR6; At1g35625; F15O4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT1G35625 AT1G35625.1 AT1G35625.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/RING 2.20e-06 29.0 233 275
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING
   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC +d+   + +++lpC+H +ha C+  w       +++f CP+C+
   Q: 233  CAICIDDYrvGEILRILPCKHKYHAVCIDSW----LGRCRSF-CPVCK 275
           ********6633399****************....7788888.****7 PP
   
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description


     Involved in the trafficking of vacuolar proteins. May function as a sorting receptor for protein trafficking to the protein storage vacuole (PSV) (By similarity).
 Involved in the trafficking of vacuolar proteins. May function as a sorting receptor for protein trafficking to the protein storage vacuole (PSV) (By similarity).
Protein Sequence
(Fasta)
MNGSWITILS LLVISQLASS KVTLIGKNTF LSFDDVEANF TPVVRRSGEY GLLYAAEPLD 60
ACSYLTNMAE KGSKFRPSYV LIVRGGCSFE EKIRNAQEAG YKAAIVYNDR YEELLVRMAG 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-007212|E3,RING|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AAATCTCTTA AACTTTAGTA GCTTCTTTTC TCGACCAATT CTGTTTTTCT TAGGGTTTGG 60
TTTGGCATGT TGTTTTGGTC GGTATTTTAT CGTACTAGGT GTTTCCATTC GACTGAAACT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-007212|E3,RING|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1015--Disulfide bond
KW-0325--Glycoprotein
KW-0472--Membrane
KW-0479--Metal-binding
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0813--Transport
KW-0926--Vacuole
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR003137--PA_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS50089--ZF_RING_2
Pfam

PF02225--PA
PF13639--zf-RING_2
SMART

SM00184--RING
Gene Ontology

GO:0016021--C:integral component of membrane
GO:0031902--C:late endosome membrane
GO:0032586--C:protein storage vacuole membrane
GO:0008270--F:zinc ion binding
GO:0015031--P:protein transport
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001413 Ailuropoda melanoleuca 32.28 1.00e-26 113.00
IUUC-Aca-004641 Anolis carolinensis 33.11 7.00e-33 134.00
IUUC-Bta-012593 Bos taurus 33.00 3.00e-33 135.00
IUUC-Cel-018181 Caenorhabditis elegans 40.22 1.00e-15 77.00
IUUC-Cja-018953 Callithrix jacchus 33.07 1.00e-30 126.00
IUUC-Cfa-020540 Canis familiaris 33.21 1.00e-29 122.00
IUUC-Csa-023070 Chlorocebus sabaeus 30.89 1.00e-32 132.00
IUUC-Dno-028877 Dasypus novemcinctus 32.28 2.00e-30 125.00
IUUC-Dor-030128 Dipodomys ordii 32.41 6.00e-27 114.00
IUUC-Ete-032577 Echinops telfairi 32.82 6.00e-30 124.00
IUUC-Eca-033699 Equus caballus 32.42 8.00e-28 117.00
IUUC-Eeu-034819 Erinaceus europaeus 31.65 6.00e-30 124.00
IUUC-Fca-036168 Felis catus 32.42 8.00e-28 117.00
IUUC-Fal-037621 Ficedula albicollis 32.67 3.00e-31 128.00
IUUC-Ggr-040021 Gaeumannomyces graminis 39.24 2.00e-14 73.60
IUUC-Ggo-045113 Gorilla gorilla 31.66 2.00e-33 135.00
IUUC-Hsa-046476 Homo sapiens 31.76 2.00e-33 135.00
IUUC-Itr-047953 Ictidomys tridecemlineatus 31.53 1.00e-32 133.00
IUUC-Kpa-049143 Komagataella pastoris 42.25 5.00e-11 61.60
IUUC-Loc-052869 Lepisosteus oculatus 34.00 1.00e-32 133.00
IUUC-Laf-053687 Loxodonta africana 30.89 2.00e-29 122.00
IUUC-Mcc-055879 Macaca mulatta 31.96 2.00e-33 135.00
IUUC-Meu-056408 Macropus eugenii 36.02 1.00e-28 119.00
IUUC-Mpo-057522 Magnaporthe poae 40.54 1.00e-14 73.90
IUUC-Mla-058935 Melampsora laricipopulina 37.84 2.00e-09 57.00
IUUC-Mmr-060656 Microcebus murinus 31.96 7.00e-33 134.00
IUUC-Mpu-066094 Mustela putorius furo 31.27 5.00e-31 127.00
IUUC-Mlu-067350 Myotis lucifugus 32.81 4.00e-28 118.00
IUUC-Nle-069971 Nomascus leucogenys 30.89 1.00e-32 132.00
IUUC-Ont-071333 Oreochromis niloticus 32.95 3.00e-30 124.00
IUUC-Oan-072733 Ornithorhynchus anatinus 32.77 1.00e-23 102.00
IUUC-Ocu-074157 Oryctolagus cuniculus 31.23 4.00e-32 131.00
IUUC-Oga-089169 Otolemur garnettii 31.78 1.00e-33 136.00
IUUC-Oar-089216 Ovis aries 32.42 2.00e-31 129.00
IUUC-Ptr-091493 Pan troglodytes 31.66 2.00e-33 135.00
IUUC-Pan-092215 Papio anubis 30.89 1.00e-32 132.00
IUUC-Psi-093062 Pelodiscus sinensis 34.51 3.00e-32 132.00
IUUC-Pab-097909 Pongo abelii 33.00 1.00e-32 133.00
IUUC-Pva-102834 Pteropus vampyrus 31.75 9.00e-31 126.00
IUUC-Rno-106080 Rattus norvegicus 31.55 4.00e-31 127.00
IUUC-Ssc-115900 Sus scrofa 31.33 4.00e-33 134.00
IUUC-Tgu-116908 Taeniopygia guttata 33.00 4.00e-31 128.00
IUUC-Tsy-119333 Tarsius syrichta 33.33 2.00e-32 132.00
Created Date 25-Jun-2017

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