iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aca-004774

Ensembl Protein ID

ENSACAP00000006236.3

UniProt Accession

H9GBB5; H9GBB5_ANOCA

Protein Name

Uncharacterized protein

Gene Name

CHD4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSACAG00000006231.3	ENSACAT00000006375.3	ENSACAP00000006236.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.70e-16	59.4	445	489

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C vC++gge    l++C+ C + +H +Cl+++  +e pn e w Cp+C+
   Q: 445  EFCRVCKDGGE----LLCCDACPSSYHIHCLNPP-LPEIPNGE-WLCPRCT 489
           58*********....*******************.*******8.******6 PP

Organism

Anolis carolinensis

Protein Sequence
(Fasta)

MASGMGSPSP CSAGSDEEEM EILLNNSIHQ HQEPEEEPEE ELLSEAEIPK IKKKKKPKKA 60
KEPKVPKLSK RQKKELGDSS GEGNEFVEEE EEVLLRSDSE GSDYTPGKKK KKKLGPKKEK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTTCTCTT CTCCTTCCCA CCCCCCAGCC CCTTTTTCCC GTCTTTAAGA AGCCGGCGTG 60
GAAGCCGGAG CCATTATTCC TTTCGGCGCG TGGTCCAGAA AATCAAGTAA GCCGGGGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028725--CHD4
IPR012957--CHD_C2
IPR012958--CHD_N
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF08074--CHDCT2
PF08073--CHDNT
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0005813--C:centrosome
GO:0005737--C:cytoplasm
GO:0016020--C:membrane
GO:0000790--C:nuclear chromatin
GO:0016581--C:NuRD complex
GO:0032993--C:protein-DNA complex
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0031492--F:nucleosomal DNA binding
GO:0000978--F:RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000980--F:RNA polymerase II distal enhancer sequence-specific DNA binding
GO:0008270--F:zinc ion binding
GO:0043044--P:ATP-dependent chromatin remodeling
GO:0006355--P:regulation of transcription, DNA-templated
GO:0051225--P:spindle assembly

KEGG

acs:100566510

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001361	Ailuropoda melanoleuca	87.17	0.00e+00	2771.00
IUUC-Apl-004175	Anas platyrhynchos	92.53	0.00e+00	2742.00
IUUC-Ame-011098	Astyanax mexicanus	79.41	0.00e+00	2367.00
IUUC-Bta-013220	Bos taurus	88.94	0.00e+00	2736.00
IUUC-Cja-019510	Callithrix jacchus	82.73	0.00e+00	2451.00
IUUC-Cfa-020422	Canis familiaris	88.91	0.00e+00	2754.00
IUUC-Cpo-021704	Cavia porcellus	89.82	0.00e+00	2738.00
IUUC-Csa-023625	Chlorocebus sabaeus	88.92	0.00e+00	2753.00
IUUC-Cho-024361	Choloepus hoffmanni	85.10	0.00e+00	1407.00
IUUC-Csv-025847	Ciona savignyi	55.91	0.00e+00	1387.00
IUUC-Dre-027505	Danio rerio	78.72	0.00e+00	2447.00
IUUC-Dno-029656	Dasypus novemcinctus	88.28	0.00e+00	2723.00
IUUC-Dor-030354	Dipodomys ordii	89.96	0.00e+00	1798.00
IUUC-Dme-032150	Drosophila melanogaster	61.20	0.00e+00	1407.00
IUUC-Eca-034112	Equus caballus	88.85	0.00e+00	2753.00
IUUC-Fca-036056	Felis catus	88.91	0.00e+00	2751.00
IUUC-Fal-037312	Ficedula albicollis	94.80	0.00e+00	2298.00
IUUC-Gga-040216	Gallus gallus	92.99	0.00e+00	2842.00
IUUC-Gac-042478	Gasterosteus aculeatus	76.98	0.00e+00	2024.00
IUUC-Ggo-044428	Gorilla gorilla	82.67	0.00e+00	2434.00
IUUC-Hsa-045908	Homo sapiens	87.43	0.00e+00	2762.00
IUUC-Itr-048002	Ictidomys tridecemlineatus	88.94	0.00e+00	2751.00
IUUC-Lch-049948	Latimeria chalumnae	77.89	0.00e+00	1906.00
IUUC-Loc-052144	Lepisosteus oculatus	83.37	0.00e+00	2108.00
IUUC-Mcc-055773	Macaca mulatta	87.28	0.00e+00	2745.00
IUUC-Mga-059633	Meleagris gallopavo	92.84	0.00e+00	2836.00
IUUC-Mmr-060886	Microcebus murinus	87.33	0.00e+00	2754.00
IUUC-Mdo-062872	Monodelphis domestica	88.48	0.00e+00	2483.00
IUUC-Mmu-063672	Mus musculus	92.44	0.00e+00	2313.00
IUUC-Mpu-066692	Mustela putorius furo	88.85	0.00e+00	2751.00
IUUC-Mlu-067785	Myotis lucifugus	89.27	0.00e+00	2747.00
IUUC-Nle-070039	Nomascus leucogenys	88.56	0.00e+00	2714.00
IUUC-Ocu-074177	Oryctolagus cuniculus	86.13	0.00e+00	2747.00
IUUC-Ola-086880	Oryzias latipes	81.09	0.00e+00	2181.00
IUUC-Oga-088970	Otolemur garnettii	87.68	0.00e+00	2744.00
IUUC-Oar-090422	Ovis aries	89.66	0.00e+00	2706.00
IUUC-Pan-092441	Papio anubis	88.96	0.00e+00	2753.00
IUUC-Psi-093530	Pelodiscus sinensis	90.71	0.00e+00	2802.00
IUUC-Pfo-097530	Poecilia formosa	82.51	0.00e+00	2115.00
IUUC-Pab-097959	Pongo abelii	88.05	0.00e+00	2685.00
IUUC-Pva-103186	Pteropus vampyrus	88.35	0.00e+00	2694.00
IUUC-Rno-105692	Rattus norvegicus	92.98	0.00e+00	2321.00
IUUC-Sly-110976	Solanum lycopersicum	43.75	0.00e+00	733.00
IUUC-Ssc-115295	Sus scrofa	92.31	0.00e+00	2311.00
IUUC-Tgu-117484	Taeniopygia guttata	91.99	0.00e+00	2827.00
IUUC-Tru-118530	Takifugu rubripes	80.87	0.00e+00	2106.00
IUUC-Tsy-119261	Tarsius syrichta	78.54	0.00e+00	1883.00
IUUC-Tni-120764	Tetraodon nigroviridis	76.31	0.00e+00	2492.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence