iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121301

Ensembl Protein ID

EOY08498

UniProt Accession

A0A061EV06; A0A061EV06_THECC

Genbank Protein ID

EOY08498.1

Protein Name

RNA helicase family protein isoform 2

Genbank Nucleotide ID

CM001883

Gene Name

TCM_022976

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_022976	EOY08497	EOY08497
TCM_022976	EOY08498	EOY08498
TCM_022976	EOY08499	EOY08499

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	35.45	3.00e-105	377.00	IUUC-Spo-108229

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MSLRLLSAHN SLTLLFSKRL FLVPTPLISS FPPPQISSFA MSHRPNYQGG RRGGGGPNSG 60
RGGGRRGGGG GGGRGGRGGE QRWWDPVWRA ERLRQKAAEM EVLDEGEWWD KINQMKKGEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTCACTGTG TTTGCACACG GAAGCAATAA CCCAGCCCAC CGCCCGCTTC CCACAGTGCG 60
ATCTATATGG AATAAAACTC CATTATTTCT CTACCTCGTA TAAATGTCAT GTCCCTGCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0347--Helicase
KW-0378--Hydrolase
KW-0547--Nucleotide-binding
KW-1185--Reference proteome

Interpro

IPR011545--DEAD/DEAH_box_helicase_dom
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR011709--DUF1605
IPR007502--Helicase-assoc_dom
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase

PROSITE

PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER

Pfam

PF00270--DEAD
PF04408--HA2
PF00271--Helicase_C
PF07717--OB_NTP_bind

SMART

SM00487--DEXDc
SM00847--HA2
SM00490--HELICc

Gene Ontology

GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003676--F:nucleic acid binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001779	Ailuropoda melanoleuca	44.44	0.00e+00	649.00
IUUC-Apl-003596	Anas platyrhynchos	40.23	6.00e-168	584.00
IUUC-Ago-007773	Ashbya gossypii	36.79	8.00e-103	368.00
IUUC-Acl-008083	Aspergillus clavatus	36.40	4.00e-110	392.00
IUUC-Afl-008510	Aspergillus flavus	35.71	2.00e-122	432.00
IUUC-Afu-008922	Aspergillus fumigatus	36.80	1.00e-114	407.00
IUUC-Ani-009411	Aspergillus nidulans	35.18	1.00e-110	394.00
IUUC-Ang-009730	Aspergillus niger	35.24	3.00e-113	402.00
IUUC-Aor-010172	Aspergillus oryzae	35.71	2.00e-122	433.00
IUUC-Ate-010493	Aspergillus terreus	35.98	6.00e-113	401.00
IUUC-Ame-011169	Astyanax mexicanus	38.97	5.00e-109	389.00
IUUC-Bgr-011983	Blumeria graminis	37.28	1.00e-126	447.00
IUUC-Bta-013378	Bos taurus	45.20	0.00e+00	652.00
IUUC-Bci-013754	Botrytis cinerea	37.45	7.00e-116	411.00
IUUC-Bol-016139	Brassica oleracea	75.36	0.00e+00	1387.00
IUUC-Bra-016816	Brassica rapa	76.33	0.00e+00	1397.00
IUUC-Cja-019540	Callithrix jacchus	44.70	0.00e+00	648.00
IUUC-Cfa-020791	Canis familiaris	43.76	0.00e+00	650.00
IUUC-Csa-024273	Chlorocebus sabaeus	44.57	0.00e+00	645.00
IUUC-Cho-024970	Choloepus hoffmanni	41.10	4.00e-166	577.00
IUUC-Cin-025138	Ciona intestinalis	44.96	6.00e-140	489.00
IUUC-Cgl-026747	Colletotrichum gloeosporioides	36.65	2.00e-121	429.00
IUUC-Cne-026991	Cryptococcus neoformans	38.84	8.00e-130	457.00
IUUC-Dre-028088	Danio rerio	40.36	6.00e-176	611.00
IUUC-Dno-029278	Dasypus novemcinctus	37.90	2.00e-107	383.00
IUUC-Dor-030468	Dipodomys ordii	44.32	2.00e-178	619.00
IUUC-Dse-031349	Dothistroma septosporum	36.23	4.00e-123	435.00
IUUC-Dme-031899	Drosophila melanogaster	40.27	6.00e-150	524.00
IUUC-Eca-033631	Equus caballus	44.57	0.00e+00	647.00
IUUC-Eeu-035300	Erinaceus europaeus	46.87	0.00e+00	662.00
IUUC-Fca-036139	Felis catus	44.70	0.00e+00	651.00
IUUC-Fal-036635	Ficedula albicollis	40.46	9.00e-170	590.00
IUUC-Fox-037919	Fusarium oxysporum	36.53	3.00e-129	455.00
IUUC-Fso-038325	Fusarium solani	36.96	2.00e-129	456.00
IUUC-Gmo-038845	Gadus morhua	38.53	4.00e-95	342.00
IUUC-Ggr-039898	Gaeumannomyces graminis	43.72	8.00e-76	278.00
IUUC-Gga-040352	Gallus gallus	43.28	0.00e+00	632.00
IUUC-Hsa-045800	Homo sapiens	44.70	0.00e+00	649.00
IUUC-Itr-047998	Ictidomys tridecemlineatus	44.21	0.00e+00	643.00
IUUC-Kpa-049373	Komagataella pastoris	33.33	4.00e-85	309.00
IUUC-Lch-050113	Latimeria chalumnae	43.34	3.00e-179	621.00
IUUC-Loc-052768	Lepisosteus oculatus	23.46	3.30e+00	26.90
IUUC-Lma-053050	Leptosphaeria maculans	35.39	3.00e-121	429.00
IUUC-Mcc-055887	Macaca mulatta	44.70	0.00e+00	647.00
IUUC-Mor-057213	Magnaporthe oryzae	36.16	3.00e-114	406.00
IUUC-Mga-059508	Meleagris gallopavo	43.30	0.00e+00	629.00
IUUC-Mvi-060345	Microbotryum violaceum	35.83	8.00e-121	428.00
IUUC-Mmr-061784	Microcebus murinus	44.44	0.00e+00	647.00
IUUC-Mdo-062130	Monodelphis domestica	39.91	5.00e-161	561.00
IUUC-Mmu-064388	Mus musculus	37.90	3.00e-106	379.00
IUUC-Mpu-066129	Mustela putorius furo	44.57	0.00e+00	650.00
IUUC-Mlu-068060	Myotis lucifugus	38.00	1.00e-107	384.00
IUUC-Nfi-068341	Neosartorya fischeri	36.06	5.00e-108	385.00
IUUC-Ncr-068804	Neurospora crassa	36.65	1.00e-116	414.00
IUUC-Nle-069904	Nomascus leucogenys	44.50	0.00e+00	645.00
IUUC-Oan-072940	Ornithorhynchus anatinus	43.58	0.00e+00	636.00
IUUC-Ocu-074808	Oryctolagus cuniculus	44.70	0.00e+00	650.00
IUUC-Ola-087195	Oryzias latipes	42.27	6.00e-180	624.00
IUUC-Olu-087596	Ostreococcus lucimarinus	43.75	1.00e-168	586.00
IUUC-Oga-088185	Otolemur garnettii	44.32	0.00e+00	645.00
IUUC-Oar-089378	Ovis aries	44.95	0.00e+00	655.00
IUUC-Ptr-091400	Pan troglodytes	44.70	0.00e+00	649.00
IUUC-Pan-092750	Papio anubis	44.70	0.00e+00	647.00
IUUC-Psi-093597	Pelodiscus sinensis	41.22	3.00e-169	588.00
IUUC-Pno-094951	Phaeosphaeria nodorum	33.37	5.00e-105	375.00
IUUC-Pfo-097056	Poecilia formosa	43.70	0.00e+00	638.00
IUUC-Pab-098729	Pongo abelii	39.62	2.00e-161	563.00
IUUC-Ppe-102067	Prunus persica	79.94	0.00e+00	1490.00
IUUC-Pva-102886	Pteropus vampyrus	46.39	4.00e-156	544.00
IUUC-Pgr-103316	Puccinia graminis	34.72	4.00e-96	345.00
IUUC-Ptt-103877	Puccinia triticina	35.09	3.00e-87	316.00
IUUC-Pte-104049	Pyrenophora teres	36.00	2.00e-115	409.00
IUUC-Pyt-104735	Pyrenophora triticirepentis	36.07	6.00e-114	405.00
IUUC-Rno-106032	Rattus norvegicus	38.06	8.00e-107	381.00
IUUC-Sce-106450	Saccharomyces cerevisiae	33.72	4.00e-96	345.00
IUUC-Sha-106606	Sarcophilus harrisii	43.32	0.00e+00	661.00
IUUC-Sja-107784	Schizosaccharomyces japonicus	31.25	6.00e-106	378.00
IUUC-Spo-108229	Schizosaccharomyces pombe	35.45	2.00e-110	393.00
IUUC-Smo-109377	Selaginella moellendorffii	64.58	0.00e+00	1026.00
IUUC-Sre-115121	Sporisorium reilianum	36.06	3.00e-111	396.00
IUUC-Tgu-117294	Taeniopygia guttata	42.98	0.00e+00	627.00
IUUC-Tru-118378	Takifugu rubripes	42.80	5.00e-168	583.00
IUUC-Tsy-119563	Tarsius syrichta	43.47	0.00e+00	632.00
IUUC-Tni-120568	Tetraodon nigroviridis	45.33	9.00e-176	610.00
IUUC-Tre-122120	Trichoderma reesei	35.29	2.00e-123	436.00
IUUC-Tvi-122632	Trichoderma virens	35.49	9.00e-126	444.00
IUUC-Tme-127179	Tuber melanosporum	31.71	1.00e-93	337.00
IUUC-Tbe-127844	Tupaia belangeri	43.29	1.00e-176	613.00
IUUC-Ttr-128592	Tursiops truncatus	44.95	0.00e+00	652.00
IUUC-Uma-129440	Ustilago maydis	36.21	5.00e-112	399.00
IUUC-Vda-129765	Verticillium dahliae	36.19	1.00e-121	430.00
IUUC-Vpa-130460	Vicugna pacos	43.14	0.00e+00	641.00
IUUC-Vvi-131000	Vitis vinifera	78.07	0.00e+00	1520.00
IUUC-Xtr-132421	Xenopus tropicalis	44.21	0.00e+00	629.00
IUUC-Xma-134305	Xiphophorus maculatus	43.10	1.00e-179	622.00
IUUC-Yli-134558	Yarrowia lipolytica	33.72	8.00e-109	387.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence