iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113981

UUCD1 version

UUC-SoB-00144

Ensembl Protein ID

Sb01g013240.1

UniProt Accession

A0A1B6QJ54; A0A1B6QJ54_SORBI

Genbank Protein ID

KXG37929.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G152500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g013240	Sb01g013240.1	Sb01g013240.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	5.60e-08	33.8	13	53

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 99   daglldrlpeeilveilklldkeellraarvcrrwq.elas 138
           +++  + lp+ei+ eil +l++++l r+++v+r+w+  ++s
   Q: 13   KSTAASALPDEIVEEILARLPAKSLRRFQCVSRSWHgLITS 53
           4567889****************************944444 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGATATASPK RIKSTAASAL PDEIVEEILA RLPAKSLRRF QCVSRSWHGL ITSPPFRQLH 60
SSRRASQPRG LFVRPAGYVG SFHACRQLGC PDPAVEEILS FADFAPGDVF PINKSCCHGL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGAGCCA CGGCCACGGC CAGCCCCAAG CGGATCAAGT CCACCGCCGC CTCCGCGCTG 60
CCCGACGAGA TCGTTGAGGA GATCCTCGCT CGCCTGCCAG CCAAGTCGCT GCGGCGCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR013187--F-box-assoc_dom_typ3
IPR017451--F-box-assoc_interact_dom
IPR001810--F-box_dom

PROSITE

PS50181--FBOX

Pfam

PF00646--F-box
PF08268--FBA_3

SMART

SM00256--FBOX

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002546	Amborella trichopoda	25.52	1.00e-11	62.80
IUUC-Aca-004498	Anolis carolinensis	31.15	4.90e-02	33.10
IUUC-Csa-023548	Chlorocebus sabaeus	44.44	1.60e-02	33.10
IUUC-Dno-030026	Dasypus novemcinctus	41.67	1.90e-01	29.60
IUUC-Eeu-035160	Erinaceus europaeus	53.85	5.80e-02	31.20
IUUC-Gma-042886	Glycine max	25.08	1.00e-16	80.10
IUUC-Mtr-057739	Medicago truncatula	23.83	2.00e-13	69.30
IUUC-Ocu-074830	Oryctolagus cuniculus	21.01	4.40e-01	29.30
IUUC-Pan-092209	Papio anubis	53.85	1.70e-02	33.10
IUUC-Ppa-095844	Physcomitrella patens	20.53	6.00e-06	44.30
IUUC-Pop-098871	Populus trichocarpa	25.63	3.00e-15	75.50
IUUC-Sly-111548	Solanum lycopersicum	26.97	1.00e-14	73.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence