iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099346

UUCD1 version

UUC-PoT-01344

Ensembl Protein ID

POPTR_0001s00610.1

UniProt Accession

B9GLH1; B9N3T1; B9GLH1_POPTR

Genbank Protein ID

EEE83925.2

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_581262; POPTR_0001s00610g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s00610	POPTR_0001s00610.1	POPTR_0001s00610.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.50e-06	28.5	322	364
UBD/Alpha-Helix/CUE	1.40e-07	32.5	533	570

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC+e++ +  + l C H+fh+ Cl  w  l +  +   +CP+Cr
   Q: 322  CAICREPMAK-AKRLHCSHIFHLVCLRSW--LDQGLNEIYSCPTCR 364
           ********99.888***************..7777888899****8 PP

UBD/Alpha-Helix/CUE

   S: 3    etaleqLkeiFPnldysviqvvLeantgsleaavnnLLe 41
             ++e+++e++P+ ++++i ++L ++t+s + +vnnLL+
   Q: 533  LAMAETVREVLPHIPDELILQDL-QRTNSATVTVNNLLQ 570
           579********************.**************8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGVSYIAISA VCTALSFVGL QWWTEVSLDR LRSDGLIGEN FINSENVNRA LELLFSSYAT 60
IALLTIFFGE LYSSETRKLV ERLINYAIYK GTFLPLVIPP TISQTGLWSI WLTVLCSLKM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGAAGCTCTT TATTTCGCCT TTGCTTTCCC GCAGAAGTCC CATCTCCCTC CCCTCGCCCT 60
CTCTTTAAAA AAATAGCCCT TTTTATTATT CTCTCTGCCA CCCAGCATCA CCACCAACAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR003892--CUE
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51140--CUE
PS50089--ZF_RING_2

Pfam

PF02845--CUE
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0001s00610g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006193	Arabidopsis lyrata	69.80	0.00e+00	790.00
IUUC-Bdi-014169	Brachypodium distachyon	52.94	6.00e-128	450.00
IUUC-Bra-017662	Brassica rapa	67.58	0.00e+00	751.00
IUUC-Eeu-034515	Erinaceus europaeus	42.71	3.00e-15	75.90
IUUC-Gma-043393	Glycine max	70.31	0.00e+00	835.00
IUUC-Lch-050491	Latimeria chalumnae	28.32	1.00e-32	134.00
IUUC-Lpe-051410	Leersia perrieri	60.76	9.00e-72	263.00
IUUC-Mtr-058643	Medicago truncatula	70.07	0.00e+00	834.00
IUUC-Mac-065495	Musa acuminata	54.17	1.00e-171	595.00
IUUC-Obr-076485	Oryza brachyantha	53.94	4.00e-135	474.00
IUUC-Olo-080588	Oryza longistaminata	56.06	3.00e-40	157.00
IUUC-Psi-093064	Pelodiscus sinensis	27.14	9.00e-32	130.00
IUUC-Ppe-102033	Prunus persica	74.06	0.00e+00	865.00
IUUC-Smo-109664	Selaginella moellendorffii	45.74	1.00e-115	409.00
IUUC-Tca-121783	Theobroma cacao	78.67	0.00e+00	930.00
IUUC-Tae-125510	Triticum aestivum	50.72	5.00e-109	387.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence