iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    gHtdsvtclaf...sd.tllvsGsdDgtikvWDlr 31
           gH++ v+++ f   s+ ++l+sGsdD t++vWDl 
   Q: 142  GHKGVVSSILFhpdSNkNILISGSDDATVRVWDLN 176
           8********9**8766899**************86 PP

UBD/Beta-Prp

   S: 19   spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdr 116
           s d+s++a ++  + i + d t+ ++ ++++g +++ ta+ +spd+k+l +++  r i+vwdl+t kc++++kghe  v+ ++ ++sg  l+++++dr
   Q: 28   SSDGSFIACAC-GDVINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADR 124
           77999999999.789*********************************************************************************** PP
   S: 117  tirvwdletgqcleetlsghdgvvncvvvhpdg..nllvsGslDrtvrlWdl....ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwd 208
            + vwd++ g c +  ++gh+gvv+++ +hpd+  n+l+sGs+D tvr+Wdl      +k+l  +++ h ++v+s++++++g  l s+++d+ v+lwd
   Q: 125  KVLVWDVDGGFCTH-YFRGHKGVVSSILFHPDSnkNILISGSDDATVRVWDLnaknTEKKCLAIMEK-HFSAVTSIALSEDGLTLFSAGRDKVVNLWD 220
           **************.****************98899****************998888999999999.****************************** PP
   S: 209  lqtgec............vrtlnght...............dnvksvrfs..pnderlvsgssDgsiriW.........dlrsgdllktlqlhn.ssv 267
           l+  +c            v      t               d+ ks +    ++ ++++++++ g++riW           +s+d++ +   ++ ++ 
   Q: 221  LHDYSCkatvatyevleaV------TtvssgtpfasfvaslDQKKSKKKEsdSQATYFITVGERGVVRIWksegsiclyEQKSSDITVSSDDEEsKRG 312
           **66664444444444440......033444455544444444443333333789***************4444444443333333333333333333 PP
   S: 268  isvavlsfgdnvlvlgsedskvniwk 293
              a++ ++d  l+ +++d+++ +++
   Q: 313  FTAAAMLPSDHGLLCVTADQQFFFYS 338
           33333456666666666666666665 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MAPHSLKKNY RCSRSLKQFY GGGPFIVSSD GSFIACACGD VINIVDSTDS SVKSTIEGES 60
DTLTALALSP DDKLLFSAGH SRQIRVWDLE TLKCIRSWKG HEGPVMGMAC HASGGLLATA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTAAACCCT AATTCTTTCT CCGGCTACCG TTTTTCTTCG CGCAAAGTCC TTCAACGTTC 60
TCTTCACCGG ACGGGAAAGA GAGTTCGCCG TCGTGATGGC TCCTCATTCG TTAAAGAAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0051301--P:cell division
GO:0009793--P:embryo development ending in seed dormancy
GO:0009880--P:embryonic pattern specification
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

ath:AT5G16750

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	59.54	0.00e+00	969.00
IUUC-Aml-002376	Ailuropoda melanoleuca	35.43	9.00e-146	510.00
IUUC-Atr-002486	Amborella trichopoda	64.48	0.00e+00	1101.00
IUUC-Apl-003519	Anas platyrhynchos	32.61	1.00e-111	396.00
IUUC-Aca-004363	Anolis carolinensis	33.26	2.00e-72	265.00
IUUC-Aly-006152	Arabidopsis lyrata	94.19	0.00e+00	1546.00
IUUC-Ago-007746	Ashbya gossypii	29.77	7.00e-99	354.00
IUUC-Acl-008009	Aspergillus clavatus	27.31	1.00e-93	337.00
IUUC-Afl-008681	Aspergillus flavus	27.44	2.00e-86	313.00
IUUC-Afu-008798	Aspergillus fumigatus	27.10	3.00e-88	319.00
IUUC-Ani-009278	Aspergillus nidulans	28.47	3.00e-101	362.00
IUUC-Ang-009640	Aspergillus niger	28.63	6.00e-101	361.00
IUUC-Aor-010160	Aspergillus oryzae	27.34	9.00e-86	311.00
IUUC-Ate-010320	Aspergillus terreus	28.12	2.00e-97	349.00
IUUC-Ame-010930	Astyanax mexicanus	38.81	6.00e-39	153.00
IUUC-Bgr-012054	Blumeria graminis	29.58	8.00e-96	344.00
IUUC-Bta-012611	Bos taurus	36.16	2.00e-140	493.00
IUUC-Bci-013797	Botrytis cinerea	28.74	3.00e-97	349.00
IUUC-Bdi-014384	Brachypodium distachyon	64.30	0.00e+00	1092.00
IUUC-Bol-015097	Brassica oleracea	91.25	0.00e+00	1511.00
IUUC-Bra-017798	Brassica rapa	91.38	0.00e+00	1495.00
IUUC-Cel-018664	Caenorhabditis elegans	27.92	2.00e-91	329.00
IUUC-Cja-019092	Callithrix jacchus	35.46	5.00e-146	511.00
IUUC-Cfa-021040	Canis familiaris	35.46	2.00e-147	515.00
IUUC-Cpo-022529	Cavia porcellus	35.66	5.00e-139	488.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	62.04	7.00e-51	191.00
IUUC-Csa-024205	Chlorocebus sabaeus	35.59	1.00e-147	516.00
IUUC-Cin-025560	Ciona intestinalis	34.53	6.00e-141	494.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	28.74	1.00e-104	374.00
IUUC-Cne-027082	Cryptococcus neoformans	29.70	2.00e-113	402.00
IUUC-Cme-027159	Cyanidioschyzon merolae	25.26	1.00e-37	152.00
IUUC-Dre-028138	Danio rerio	35.44	3.00e-144	505.00
IUUC-Dno-029914	Dasypus novemcinctus	33.79	9.00e-99	353.00
IUUC-Dor-030685	Dipodomys ordii	36.04	2.00e-89	323.00
IUUC-Dse-031429	Dothistroma septosporum	27.90	4.00e-99	355.00
IUUC-Dme-031995	Drosophila melanogaster	29.25	2.00e-90	326.00
IUUC-Ete-033086	Echinops telfairi	38.41	2.00e-87	316.00
IUUC-Eca-034354	Equus caballus	36.29	9.00e-141	493.00
IUUC-Eeu-034832	Erinaceus europaeus	37.28	3.00e-84	305.00
IUUC-Fca-036136	Felis catus	32.52	1.00e-119	423.00
IUUC-Fal-036859	Ficedula albicollis	36.51	3.00e-152	531.00
IUUC-Fox-037863	Fusarium oxysporum	28.36	2.00e-93	336.00
IUUC-Fso-038389	Fusarium solani	27.27	3.00e-99	355.00
IUUC-Gmo-038711	Gadus morhua	34.06	2.00e-133	469.00
IUUC-Ggr-039820	Gaeumannomyces graminis	27.40	3.00e-94	339.00
IUUC-Gga-040263	Gallus gallus	36.19	1.00e-151	529.00
IUUC-Gac-041291	Gasterosteus aculeatus	36.74	1.00e-152	533.00
IUUC-Gma-044026	Glycine max	69.26	0.00e+00	1192.00
IUUC-Ggo-044693	Gorilla gorilla	35.39	1.00e-146	513.00
IUUC-Hsa-046048	Homo sapiens	35.39	3.00e-146	511.00
IUUC-Hvu-047608	Hordeum vulgare	63.98	0.00e+00	1078.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	36.15	8.00e-155	540.00
IUUC-Kpa-049209	Komagataella pastoris	30.47	2.00e-110	392.00
IUUC-Lch-050085	Latimeria chalumnae	34.73	2.00e-139	489.00
IUUC-Lpe-050945	Leersia perrieri	62.08	0.00e+00	1035.00
IUUC-Loc-052679	Lepisosteus oculatus	36.36	1.00e-163	570.00
IUUC-Laf-053685	Loxodonta africana	35.46	7.00e-135	474.00
IUUC-Mcc-055861	Macaca mulatta	35.47	1.00e-145	509.00
IUUC-Meu-056820	Macropus eugenii	33.46	1.00e-107	383.00
IUUC-Mor-057234	Magnaporthe oryzae	27.45	1.00e-85	310.00
IUUC-Mpo-057456	Magnaporthe poae	28.35	1.00e-70	260.00
IUUC-Mtr-058122	Medicago truncatula	69.36	0.00e+00	1188.00
IUUC-Mla-058980	Melampsora laricipopulina	27.65	3.00e-74	272.00
IUUC-Mga-060080	Meleagris gallopavo	35.41	1.00e-148	519.00
IUUC-Mvi-060338	Microbotryum violaceum	32.51	7.00e-133	467.00
IUUC-Mmr-060762	Microcebus murinus	35.87	9.00e-144	503.00
IUUC-Mdo-061975	Monodelphis domestica	37.04	2.00e-146	512.00
IUUC-Mmu-064038	Mus musculus	35.54	7.00e-143	500.00
IUUC-Mac-065189	Musa acuminata	63.05	0.00e+00	1117.00
IUUC-Mpu-066526	Mustela putorius furo	36.12	1.00e-140	493.00
IUUC-Mlu-067716	Myotis lucifugus	35.42	1.00e-154	539.00
IUUC-Nfi-068474	Neosartorya fischeri	27.28	1.00e-92	333.00
IUUC-Ncr-068826	Neurospora crassa	26.11	3.00e-91	328.00
IUUC-Nle-069832	Nomascus leucogenys	35.34	2.00e-147	516.00
IUUC-Opr-071183	Ochotona princeps	35.06	6.00e-139	487.00
IUUC-Ont-072371	Oreochromis niloticus	36.35	8.00e-155	540.00
IUUC-Oan-073491	Ornithorhynchus anatinus	34.55	3.00e-122	432.00
IUUC-Oba-075963	Oryza barthii	62.33	0.00e+00	1067.00
IUUC-Obr-076173	Oryza brachyantha	63.38	0.00e+00	1050.00
IUUC-Ogl-077692	Oryza glaberrima	62.58	0.00e+00	1064.00
IUUC-Ogu-078965	Oryza glumaepatula	62.33	0.00e+00	1067.00
IUUC-Oin-079708	Oryza indica	61.97	0.00e+00	1063.00
IUUC-Olo-080679	Oryza longistaminata	62.09	0.00e+00	1066.00
IUUC-Oni-082960	Oryza nivara	61.85	0.00e+00	1061.00
IUUC-Opu-083282	Oryza punctata	61.79	0.00e+00	1032.00
IUUC-Oru-085224	Oryza rufipogon	62.21	0.00e+00	1065.00
IUUC-Osa-085320	Oryza sativa	62.21	0.00e+00	1065.00
IUUC-Ola-086370	Oryzias latipes	29.74	9.00e-70	257.00
IUUC-Olu-087814	Ostreococcus lucimarinus	35.42	5.00e-129	454.00
IUUC-Oga-088458	Otolemur garnettii	35.23	2.00e-151	529.00
IUUC-Oar-090032	Ovis aries	33.93	1.00e-101	363.00
IUUC-Ptr-090749	Pan troglodytes	35.27	3.00e-145	508.00
IUUC-Pan-091691	Papio anubis	34.62	1.00e-136	479.00
IUUC-Psi-093200	Pelodiscus sinensis	36.70	3.00e-153	535.00
IUUC-Pma-094165	Petromyzon marinus	33.52	2.00e-103	369.00
IUUC-Pno-095048	Phaeosphaeria nodorum	29.72	1.00e-80	293.00
IUUC-Ppa-095336	Physcomitrella patens	53.45	0.00e+00	880.00
IUUC-Pfo-096132	Poecilia formosa	37.16	3.00e-150	525.00
IUUC-Pab-097855	Pongo abelii	35.52	7.00e-149	520.00
IUUC-Pop-099434	Populus trichocarpa	68.71	0.00e+00	1166.00
IUUC-Pca-100232	Procavia capensis	32.93	6.00e-49	188.00
IUUC-Ppe-101665	Prunus persica	71.94	0.00e+00	1202.00
IUUC-Pva-102178	Pteropus vampyrus	35.78	4.00e-146	511.00
IUUC-Pgr-103288	Puccinia graminis	26.92	2.00e-75	276.00
IUUC-Ptt-103808	Puccinia triticina	28.55	8.00e-70	258.00
IUUC-Pte-104205	Pyrenophora teres	30.49	3.00e-101	362.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	29.81	1.00e-93	337.00
IUUC-Rno-105617	Rattus norvegicus	35.92	6.00e-143	500.00
IUUC-Sce-106281	Saccharomyces cerevisiae	30.83	3.00e-105	375.00
IUUC-Sha-107378	Sarcophilus harrisii	37.14	1.00e-146	513.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	32.41	4.00e-115	408.00
IUUC-Spo-108361	Schizosaccharomyces pombe	33.61	2.00e-74	273.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	29.19	2.00e-104	372.00
IUUC-Smo-109257	Selaginella moellendorffii	50.79	0.00e+00	863.00
IUUC-Sit-110258	Setaria italica	62.23	0.00e+00	1092.00
IUUC-Sly-111521	Solanum lycopersicum	67.93	0.00e+00	1134.00
IUUC-Stu-112718	Solanum tuberosum	71.32	2.00e-51	193.00
IUUC-Sar-113586	Sorex araneus	34.42	1.00e-17	84.30
IUUC-Sbi-114768	Sorghum bicolor	62.35	0.00e+00	1089.00
IUUC-Sre-115159	Sporisorium reilianum	32.04	6.00e-91	328.00
IUUC-Ssc-116342	Sus scrofa	27.50	6.00e-61	228.00
IUUC-Tgu-117320	Taeniopygia guttata	35.48	9.00e-139	486.00
IUUC-Tru-118024	Takifugu rubripes	36.36	2.00e-151	529.00
IUUC-Tni-119971	Tetraodon nigroviridis	35.50	2.00e-150	525.00
IUUC-Tca-121248	Theobroma cacao	75.40	0.00e+00	1211.00
IUUC-Tre-122079	Trichoderma reesei	27.58	8.00e-100	357.00
IUUC-Tvi-122554	Trichoderma virens	28.02	7.00e-104	371.00
IUUC-Tae-123690	Triticum aestivum	63.95	0.00e+00	1091.00
IUUC-Tur-126436	Triticum urartu	59.73	0.00e+00	867.00
IUUC-Tme-126942	Tuber melanosporum	31.43	8.00e-105	374.00
IUUC-Ttr-128964	Tursiops truncatus	34.93	2.00e-141	496.00
IUUC-Uma-129473	Ustilago maydis	29.87	3.00e-95	343.00
IUUC-Vda-129749	Verticillium dahliae	29.26	7.00e-91	327.00
IUUC-Vvi-131511	Vitis vinifera	72.98	0.00e+00	1209.00
IUUC-Xtr-132816	Xenopus tropicalis	34.10	2.00e-129	456.00
IUUC-Xma-133672	Xiphophorus maculatus	36.43	2.00e-155	542.00
IUUC-Yli-134602	Yarrowia lipolytica	33.99	8.00e-130	457.00
IUUC-Zma-135559	Zea mays	60.00	0.00e+00	1053.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence